BLASTX nr result
ID: Panax21_contig00002324
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00002324
(3646 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002532893.1| pentatricopeptide repeat-containing protein,... 479 e-132
ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containi... 473 e-130
emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera] 473 e-130
ref|XP_002329310.1| predicted protein [Populus trichocarpa] gi|2... 465 e-128
ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containi... 432 e-118
>ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527353|gb|EEF29498.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 625
Score = 479 bits (1234), Expect = e-132
Identities = 229/291 (78%), Positives = 264/291 (90%)
Frame = -3
Query: 3644 EGRMREALRLFKEIKDSTPNHVTYTTLIDGYCRVNDLDEALRLREAMESKGLYPGVVTYN 3465
EGRMREA+RLFKEI+D+TPNHVTYTTLIDGYCR+NDLD+ALRLRE ME++GLYP VVTYN
Sbjct: 283 EGRMREAMRLFKEIRDATPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYN 342
Query: 3464 SVLRKLCEEGRIKDANKLLNEMNEKEIEPDNITCNTLINAYCKIGDMKSALKVKNRMLEA 3285
S+LRKLCE GRI+DANKLLNEM+EK+IEPDN+TCNTLINAYCKIGDMKSALKVKNRM+EA
Sbjct: 343 SILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEA 402
Query: 3284 GLKPDPFTYKALIHGFCRKLEMDSAKEQLFSMLDAKFSPSYCTYSWLVDGYCNQGNEEAV 3105
GLK D FTYKALIHGFC+ EMD AKE L SMLDA FSPSYCTYSWLVDGYCNQ NEEAV
Sbjct: 403 GLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAV 462
Query: 3104 INLPEDFLQRGLCIDISLYRALIRRFCKREKVNCAQRIFSMMQGRGMLGDSVVYTSMAYA 2925
+ LP++F+++GLC+D SLYRALIRRFCKRE+V+ A++IFS+MQ +G LGDSV+YTS+AYA
Sbjct: 463 LKLPDEFVRKGLCVDKSLYRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTSLAYA 522
Query: 2924 YLKAGKQIAASDILDEMYKRRLMITLKIYRSFNALYTGDKNILDIFWDLVI 2772
Y K GK AASD+LDEMYKRRLMITLKIYR+ NA Y GD +IL +FW+ V+
Sbjct: 523 YWKLGKANAASDLLDEMYKRRLMITLKIYRALNASYAGDNSILSLFWNHVV 573
Score = 137 bits (346), Expect = 2e-29
Identities = 78/269 (28%), Positives = 142/269 (52%), Gaps = 2/269 (0%)
Frame = -3
Query: 3632 REALRLFKE--IKDSTPNHVTYTTLIDGYCRVNDLDEALRLREAMESKGLYPGVVTYNSV 3459
+EA+++F+ + P+ T L++ + D ++ + M G+ + YN +
Sbjct: 147 QEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKMARIGVEANIHVYNVL 206
Query: 3458 LRKLCEEGRIKDANKLLNEMNEKEIEPDNITCNTLINAYCKIGDMKSALKVKNRMLEAGL 3279
+ C+ G ++ A+ LL+EM K + PD T NTLI+ YCK G AL V++RM G+
Sbjct: 207 IHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGI 266
Query: 3278 KPDPFTYKALIHGFCRKLEMDSAKEQLFSMLDAKFSPSYCTYSWLVDGYCNQGNEEAVIN 3099
KPD TY +LIHGFC++ M A + DA +P++ TY+ L+DGYC + + +
Sbjct: 267 KPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDA--TPNHVTYTTLIDGYCRLNDLDQALR 324
Query: 3098 LPEDFLQRGLCIDISLYRALIRRFCKREKVNCAQRIFSMMQGRGMLGDSVVYTSMAYAYL 2919
L E+ +GL + Y +++R+ C+ ++ A ++ + M + + D+V ++ AY
Sbjct: 325 LREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYC 384
Query: 2918 KAGKQIAASDILDEMYKRRLMITLKIYRS 2832
K G +A + + M + L + Y++
Sbjct: 385 KIGDMKSALKVKNRMVEAGLKLDQFTYKA 413
>ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein At5g38730-like
[Vitis vinifera]
Length = 590
Score = 473 bits (1217), Expect = e-130
Identities = 230/311 (73%), Positives = 272/311 (87%)
Frame = -3
Query: 3644 EGRMREALRLFKEIKDSTPNHVTYTTLIDGYCRVNDLDEALRLREAMESKGLYPGVVTYN 3465
EGRMREALRLF+EI +TPNHVTYTTLIDGYCRVNDL+EALRLRE ME +GL+PGVVTYN
Sbjct: 280 EGRMREALRLFREINGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYN 339
Query: 3464 SVLRKLCEEGRIKDANKLLNEMNEKEIEPDNITCNTLINAYCKIGDMKSALKVKNRMLEA 3285
S+LRKLCEEG+IKDAN+LLNEM+E+++EPDN+TCNTLINAYCKIGDM SA+KVK +MLEA
Sbjct: 340 SILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEA 399
Query: 3284 GLKPDPFTYKALIHGFCRKLEMDSAKEQLFSMLDAKFSPSYCTYSWLVDGYCNQGNEEAV 3105
GLKPD FT+KALIHGFC+ E+DSAKE LF MLDA FSPSY TYSWLVD Y +Q N+EAV
Sbjct: 400 GLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAV 459
Query: 3104 INLPEDFLQRGLCIDISLYRALIRRFCKREKVNCAQRIFSMMQGRGMLGDSVVYTSMAYA 2925
I LP++ ++GL +DIS+YRALIRR CK +K+ A+RIF++MQG+GM GDSVVYTS+AYA
Sbjct: 460 IRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYA 519
Query: 2924 YLKAGKQIAASDILDEMYKRRLMITLKIYRSFNALYTGDKNILDIFWDLVIKKGLVSKTL 2745
Y KAGK IAASD+LDEM KRRLMITLKIYR F+A Y GD +IL +FWD VI++ L+SK +
Sbjct: 520 YFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSILGLFWDHVIERRLISKNI 579
Query: 2744 SKDIQQLKVHS 2712
K IQQL V+S
Sbjct: 580 LKYIQQLDVNS 590
Score = 133 bits (334), Expect = 4e-28
Identities = 78/260 (30%), Positives = 139/260 (53%), Gaps = 2/260 (0%)
Frame = -3
Query: 3632 REALRLFKEIK--DSTPNHVTYTTLIDGYCRVNDLDEALRLREAMESKGLYPGVVTYNSV 3459
++A+++F+ ++ P+ T L++ + + ++ + M G+ P + +N +
Sbjct: 144 QDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVL 203
Query: 3458 LRKLCEEGRIKDANKLLNEMNEKEIEPDNITCNTLINAYCKIGDMKSALKVKNRMLEAGL 3279
+ C+ G ++ A +LLNEM + I PD T NTLI+ YCK G AL +++RM G+
Sbjct: 204 IHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGV 263
Query: 3278 KPDPFTYKALIHGFCRKLEMDSAKEQLFSMLDAKFSPSYCTYSWLVDGYCNQGNEEAVIN 3099
PD TY +LI+GFCR+ M A +LF ++ +P++ TY+ L+DGYC + E +
Sbjct: 264 SPDIVTYNSLIYGFCREGRMREAL-RLFREINGA-TPNHVTYTTLIDGYCRVNDLEEALR 321
Query: 3098 LPEDFLQRGLCIDISLYRALIRRFCKREKVNCAQRIFSMMQGRGMLGDSVVYTSMAYAYL 2919
L E GL + Y +++R+ C+ K+ A R+ + M R + D+V ++ AY
Sbjct: 322 LREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYC 381
Query: 2918 KAGKQIAASDILDEMYKRRL 2859
K G +A + +M + L
Sbjct: 382 KIGDMGSAMKVKKKMLEAGL 401
>emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 473 bits (1217), Expect = e-130
Identities = 230/311 (73%), Positives = 272/311 (87%)
Frame = -3
Query: 3644 EGRMREALRLFKEIKDSTPNHVTYTTLIDGYCRVNDLDEALRLREAMESKGLYPGVVTYN 3465
EGRMREALRLF+EI +TPNHVTYTTLIDGYCRVNDL+EALRLRE ME +GL+PGVVTYN
Sbjct: 280 EGRMREALRLFREINGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYN 339
Query: 3464 SVLRKLCEEGRIKDANKLLNEMNEKEIEPDNITCNTLINAYCKIGDMKSALKVKNRMLEA 3285
S+LRKLCEEG+IKDAN+LLNEM+E+++EPDN+TCNTLINAYCKIGDM SA+KVK +MLEA
Sbjct: 340 SILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEA 399
Query: 3284 GLKPDPFTYKALIHGFCRKLEMDSAKEQLFSMLDAKFSPSYCTYSWLVDGYCNQGNEEAV 3105
GLKPD FT+KALIHGFC+ E+DSAKE LF MLDA FSPSY TYSWLVD Y +Q N+EAV
Sbjct: 400 GLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAV 459
Query: 3104 INLPEDFLQRGLCIDISLYRALIRRFCKREKVNCAQRIFSMMQGRGMLGDSVVYTSMAYA 2925
I LP++ ++GL +DIS+YRALIRR CK +K+ A+RIF++MQG+GM GDSVVYTS+AYA
Sbjct: 460 IRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYA 519
Query: 2924 YLKAGKQIAASDILDEMYKRRLMITLKIYRSFNALYTGDKNILDIFWDLVIKKGLVSKTL 2745
Y KAGK IAASD+LDEM KRRLMITLKIYR F+A Y GD +IL +FWD VI++ L+SK +
Sbjct: 520 YFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSILGLFWDHVIERRLISKNI 579
Query: 2744 SKDIQQLKVHS 2712
K IQQL V+S
Sbjct: 580 LKYIQQLDVNS 590
Score = 133 bits (334), Expect = 4e-28
Identities = 78/260 (30%), Positives = 139/260 (53%), Gaps = 2/260 (0%)
Frame = -3
Query: 3632 REALRLFKEIK--DSTPNHVTYTTLIDGYCRVNDLDEALRLREAMESKGLYPGVVTYNSV 3459
++A+++F+ ++ P+ T L++ + + ++ + M G+ P + +N +
Sbjct: 144 QDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVL 203
Query: 3458 LRKLCEEGRIKDANKLLNEMNEKEIEPDNITCNTLINAYCKIGDMKSALKVKNRMLEAGL 3279
+ C+ G ++ A +LLNEM + I PD T NTLI+ YCK G AL +++RM G+
Sbjct: 204 IHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGV 263
Query: 3278 KPDPFTYKALIHGFCRKLEMDSAKEQLFSMLDAKFSPSYCTYSWLVDGYCNQGNEEAVIN 3099
PD TY +LI+GFCR+ M A +LF ++ +P++ TY+ L+DGYC + E +
Sbjct: 264 SPDIVTYNSLIYGFCREGRMREAL-RLFREINGA-TPNHVTYTTLIDGYCRVNDLEEALR 321
Query: 3098 LPEDFLQRGLCIDISLYRALIRRFCKREKVNCAQRIFSMMQGRGMLGDSVVYTSMAYAYL 2919
L E GL + Y +++R+ C+ K+ A R+ + M R + D+V ++ AY
Sbjct: 322 LREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYC 381
Query: 2918 KAGKQIAASDILDEMYKRRL 2859
K G +A + +M + L
Sbjct: 382 KIGDMGSAMKVKKKMLEAGL 401
>ref|XP_002329310.1| predicted protein [Populus trichocarpa] gi|222870764|gb|EEF07895.1|
predicted protein [Populus trichocarpa]
Length = 593
Score = 465 bits (1197), Expect = e-128
Identities = 217/305 (71%), Positives = 263/305 (86%)
Frame = -3
Query: 3644 EGRMREALRLFKEIKDSTPNHVTYTTLIDGYCRVNDLDEALRLREAMESKGLYPGVVTYN 3465
EGRMREA++LF++IKD TPNHVTYT+LIDGYCRVNDLDEALRL+E M KGLYP V+TYN
Sbjct: 289 EGRMREAVQLFRDIKDVTPNHVTYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVITYN 348
Query: 3464 SVLRKLCEEGRIKDANKLLNEMNEKEIEPDNITCNTLINAYCKIGDMKSALKVKNRMLEA 3285
S+LRKLCE GR++DAN LLNEM+E++IEPDN+TCNTLINAYCKIGDM+SALKVK++M+ A
Sbjct: 349 SILRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGA 408
Query: 3284 GLKPDPFTYKALIHGFCRKLEMDSAKEQLFSMLDAKFSPSYCTYSWLVDGYCNQGNEEAV 3105
GLK D FTYKALIHGFC+ E+D AKE LF M+DA FSPSYCTYSWLVD YC Q NEEAV
Sbjct: 409 GLKLDQFTYKALIHGFCKAKEIDKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQNEEAV 468
Query: 3104 INLPEDFLQRGLCIDISLYRALIRRFCKREKVNCAQRIFSMMQGRGMLGDSVVYTSMAYA 2925
I LP++ ++RGLC+D+S+YRALIRRFCK EK++CAQR+ +M+ +G+ GDSVVYTS+AY
Sbjct: 469 IKLPDELVRRGLCVDVSVYRALIRRFCKIEKIDCAQRVLGLMKDKGIFGDSVVYTSLAYG 528
Query: 2924 YLKAGKQIAASDILDEMYKRRLMITLKIYRSFNALYTGDKNILDIFWDLVIKKGLVSKTL 2745
Y K GK SDILDEMYK+RLMITLKIYRSFNA Y D +IL +FW+ V+++ L+SK +
Sbjct: 529 YWKVGKVNVTSDILDEMYKKRLMITLKIYRSFNASYASDNSILSLFWNHVLERRLMSKNI 588
Query: 2744 SKDIQ 2730
KD+Q
Sbjct: 589 LKDMQ 593
Score = 139 bits (349), Expect = 7e-30
Identities = 81/268 (30%), Positives = 143/268 (53%), Gaps = 2/268 (0%)
Frame = -3
Query: 3629 EALRLFKEIKDS--TPNHVTYTTLIDGYCRVNDLDEALRLREAMESKGLYPGVVTYNSVL 3456
EA+++F+ ++ + P+ T L++ + D ++ + M G+ + YN +L
Sbjct: 154 EAIQVFEHMRVNGFRPHLHACTVLLNSLAKDRLTDTVWKIYKKMVKLGVVANIHVYNVLL 213
Query: 3455 RKLCEEGRIKDANKLLNEMNEKEIEPDNITCNTLINAYCKIGDMKSALKVKNRMLEAGLK 3276
C+ G ++ A K+L+EM K + PD T NTLI+ YCK G AL V++RM AG+
Sbjct: 214 HACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEMAGIS 273
Query: 3275 PDPFTYKALIHGFCRKLEMDSAKEQLFSMLDAKFSPSYCTYSWLVDGYCNQGNEEAVINL 3096
PD FTY +LI+GFCR+ M A + + D +P++ TY+ L+DGYC + + + L
Sbjct: 274 PDIFTYNSLIYGFCREGRMREAVQLFRDIKDV--TPNHVTYTSLIDGYCRVNDLDEALRL 331
Query: 3095 PEDFLQRGLCIDISLYRALIRRFCKREKVNCAQRIFSMMQGRGMLGDSVVYTSMAYAYLK 2916
E ++GL + Y +++R+ C+ ++ A + + M R + D+V ++ AY K
Sbjct: 332 KEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLINAYCK 391
Query: 2915 AGKQIAASDILDEMYKRRLMITLKIYRS 2832
G +A + D+M L + Y++
Sbjct: 392 IGDMRSALKVKDKMVGAGLKLDQFTYKA 419
>ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein At5g38730-like
[Glycine max]
Length = 587
Score = 432 bits (1112), Expect = e-118
Identities = 198/306 (64%), Positives = 258/306 (84%)
Frame = -3
Query: 3644 EGRMREALRLFKEIKDSTPNHVTYTTLIDGYCRVNDLDEALRLREAMESKGLYPGVVTYN 3465
EGRMREA+R+F EIK++TPNHVTYTTLIDGYC+ N+L+EAL++ + ME+KGLYPGVVTYN
Sbjct: 279 EGRMREAMRMFSEIKNATPNHVTYTTLIDGYCKTNELEEALKMCKLMEAKGLYPGVVTYN 338
Query: 3464 SVLRKLCEEGRIKDANKLLNEMNEKEIEPDNITCNTLINAYCKIGDMKSALKVKNRMLEA 3285
S+LRKLC++GRI+DANKLLNEM+E++++ DNITCNTLINAYCKIGD+KSALK KN+MLEA
Sbjct: 339 SILRKLCQDGRIRDANKLLNEMSERKLQADNITCNTLINAYCKIGDLKSALKFKNKMLEA 398
Query: 3284 GLKPDPFTYKALIHGFCRKLEMDSAKEQLFSMLDAKFSPSYCTYSWLVDGYCNQGNEEAV 3105
GLKPDPFTYKALIHGFC+ E++SAKE +FSMLDA F+PSYCTYSW+VDGY + N +AV
Sbjct: 399 GLKPDPFTYKALIHGFCKTNELESAKELMFSMLDAGFTPSYCTYSWIVDGYNKKDNMDAV 458
Query: 3104 INLPEDFLQRGLCIDISLYRALIRRFCKREKVNCAQRIFSMMQGRGMLGDSVVYTSMAYA 2925
+ LP++FL RG+C+D+S+YRALIR CK E++ CA+R+F M+G+G+ G+SV+YTS+AYA
Sbjct: 459 LALPDEFLSRGICLDVSVYRALIRSSCKVERIQCAERLFYHMEGKGISGESVIYTSIAYA 518
Query: 2924 YLKAGKQIAASDILDEMYKRRLMITLKIYRSFNALYTGDKNILDIFWDLVIKKGLVSKTL 2745
Y G AAS +L+EM +RRLMIT+K+YR F+ + + IFW+ V+ +GL+S+
Sbjct: 519 YWNVGNVSAASSMLEEMARRRLMITVKLYRCFSTSDANENKVSQIFWNHVMDRGLMSRNT 578
Query: 2744 SKDIQQ 2727
IQQ
Sbjct: 579 MNKIQQ 584
Score = 121 bits (304), Expect = 1e-24
Identities = 68/260 (26%), Positives = 135/260 (51%), Gaps = 2/260 (0%)
Frame = -3
Query: 3632 REALRLFKEIK--DSTPNHVTYTTLIDGYCRVNDLDEALRLREAMESKGLYPGVVTYNSV 3459
++A+++F++++ + P+ T L++ + ++ + M G+ P + YN +
Sbjct: 143 QDAIQVFEQMRLHEVKPHLHACTVLLNSLLKDGVTHMVWKIYKRMVQVGVVPNIYIYNCL 202
Query: 3458 LRKLCEEGRIKDANKLLNEMNEKEIEPDNITCNTLINAYCKIGDMKSALKVKNRMLEAGL 3279
+ G ++ A +LLNEM+ K + D T NTL++ YCK G AL ++NRM G+
Sbjct: 203 FHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCKKGMHYEALSIQNRMEREGI 262
Query: 3278 KPDPFTYKALIHGFCRKLEMDSAKEQLFSMLDAKFSPSYCTYSWLVDGYCNQGNEEAVIN 3099
D +Y +LI+GFC++ M A + +A +P++ TY+ L+DGYC E +
Sbjct: 263 NLDIVSYNSLIYGFCKEGRMREAMRMFSEIKNA--TPNHVTYTTLIDGYCKTNELEEALK 320
Query: 3098 LPEDFLQRGLCIDISLYRALIRRFCKREKVNCAQRIFSMMQGRGMLGDSVVYTSMAYAYL 2919
+ + +GL + Y +++R+ C+ ++ A ++ + M R + D++ ++ AY
Sbjct: 321 MCKLMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNEMSERKLQADNITCNTLINAYC 380
Query: 2918 KAGKQIAASDILDEMYKRRL 2859
K G +A ++M + L
Sbjct: 381 KIGDLKSALKFKNKMLEAGL 400