BLASTX nr result

ID: Panax21_contig00002323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002323
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001060360.1| Os07g0631100 [Oryza sativa Japonica Group] g...   151   8e-35
emb|CBI30630.3| unnamed protein product [Vitis vinifera]              148   5e-34
ref|XP_002277951.1| PREDICTED: transcription elongation factor 1...   148   5e-34
ref|XP_003564321.1| PREDICTED: transcription elongation factor 1...   147   9e-34
gb|AFK34432.1| unknown [Lotus japonicus]                              145   3e-33

>ref|NP_001060360.1| Os07g0631100 [Oryza sativa Japonica Group]
           gi|25453308|sp|Q8LHP0.1|ELOF1_ORYSJ RecName:
           Full=Transcription elongation factor 1 homolog
           gi|22296365|dbj|BAC10134.1| unknown protein [Oryza
           sativa Japonica Group] gi|113611896|dbj|BAF22274.1|
           Os07g0631100 [Oryza sativa Japonica Group]
           gi|125538787|gb|EAY85182.1| hypothetical protein
           OsI_06540 [Oryza sativa Indica Group]
           gi|125601184|gb|EAZ40760.1| hypothetical protein
           OsJ_25233 [Oryza sativa Japonica Group]
          Length = 89

 Score =  151 bits (381), Expect = 8e-35
 Identities = 69/73 (94%), Positives = 71/73 (97%)
 Frame = -1

Query: 486 MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEASCRICQESFSTTVTALTEPIDIYSEWID 307
           MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEASCRICQE+FSTTV ALTEPIDIYSEWID
Sbjct: 16  MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEASCRICQENFSTTVNALTEPIDIYSEWID 75

Query: 306 ECERVNNPEDDEG 268
           ECERVNN EDD+G
Sbjct: 76  ECERVNNVEDDDG 88


>emb|CBI30630.3| unnamed protein product [Vitis vinifera]
          Length = 128

 Score =  148 bits (374), Expect = 5e-34
 Identities = 69/79 (87%), Positives = 72/79 (91%)
 Frame = -1

Query: 486 MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEASCRICQESFSTTVTALTEPIDIYSEWID 307
           MDKLDTVFSCPFCNHG+ VECRIDMKNLIGEASCRICQESFSTTVTALTEPIDIYSEWID
Sbjct: 49  MDKLDTVFSCPFCNHGTGVECRIDMKNLIGEASCRICQESFSTTVTALTEPIDIYSEWID 108

Query: 306 ECERVNNPEDDEGVKNLED 250
           ECERVNN EDD  ++   D
Sbjct: 109 ECERVNNLEDDGHLEGRAD 127


>ref|XP_002277951.1| PREDICTED: transcription elongation factor 1 homolog isoform 1
           [Vitis vinifera]
          Length = 95

 Score =  148 bits (374), Expect = 5e-34
 Identities = 69/79 (87%), Positives = 72/79 (91%)
 Frame = -1

Query: 486 MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEASCRICQESFSTTVTALTEPIDIYSEWID 307
           MDKLDTVFSCPFCNHG+ VECRIDMKNLIGEASCRICQESFSTTVTALTEPIDIYSEWID
Sbjct: 16  MDKLDTVFSCPFCNHGTGVECRIDMKNLIGEASCRICQESFSTTVTALTEPIDIYSEWID 75

Query: 306 ECERVNNPEDDEGVKNLED 250
           ECERVNN EDD  ++   D
Sbjct: 76  ECERVNNLEDDGHLEGRAD 94


>ref|XP_003564321.1| PREDICTED: transcription elongation factor 1 homolog isoform 1
           [Brachypodium distachyon]
           gi|357125278|ref|XP_003564322.1| PREDICTED:
           transcription elongation factor 1 homolog isoform 2
           [Brachypodium distachyon]
          Length = 89

 Score =  147 bits (372), Expect = 9e-34
 Identities = 67/73 (91%), Positives = 70/73 (95%)
 Frame = -1

Query: 486 MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEASCRICQESFSTTVTALTEPIDIYSEWID 307
           MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEA+CRICQE+FSTTV ALTEPIDIYSEWID
Sbjct: 16  MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEANCRICQENFSTTVNALTEPIDIYSEWID 75

Query: 306 ECERVNNPEDDEG 268
           ECERVN  EDD+G
Sbjct: 76  ECERVNTVEDDDG 88


>gb|AFK34432.1| unknown [Lotus japonicus]
          Length = 88

 Score =  145 bits (367), Expect = 3e-33
 Identities = 66/71 (92%), Positives = 69/71 (97%)
 Frame = -1

Query: 486 MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEASCRICQESFSTTVTALTEPIDIYSEWID 307
           MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEASC ICQESFSTT+TAL+E IDIYSEWID
Sbjct: 16  MDKLDTVFSCPFCNHGSSVECRIDMKNLIGEASCGICQESFSTTITALSEAIDIYSEWID 75

Query: 306 ECERVNNPEDD 274
           ECERVNNP+DD
Sbjct: 76  ECERVNNPDDD 86


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