BLASTX nr result

ID: Panax21_contig00002321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002321
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529686.1| Minor histocompatibility antigen H13, putati...    92   1e-23
gb|ABK92483.1| unknown [Populus trichocarpa]                           92   7e-23
ref|XP_002321110.1| predicted protein [Populus trichocarpa] gi|2...    93   1e-22
ref|XP_002301641.1| predicted protein [Populus trichocarpa] gi|2...    91   2e-22
ref|XP_002268575.1| PREDICTED: signal peptide peptidase-like 2B ...    90   3e-22

>ref|XP_002529686.1| Minor histocompatibility antigen H13, putative [Ricinus communis]
           gi|223530834|gb|EEF32697.1| Minor histocompatibility
           antigen H13, putative [Ricinus communis]
          Length = 535

 Score = 91.7 bits (226), Expect(2) = 1e-23
 Identities = 45/74 (60%), Positives = 56/74 (75%)
 Frame = -3

Query: 431 LGARFGAALPTREKEGLRLSASIPNPLDCCSTLSSMFSGSIALCRRGSCDFSTKAVVAQS 252
           + ARFGA LP+  ++GLRLSA   NPL+CCS+ SS  SGSIA+  RG C F+ KA VAQS
Sbjct: 61  VSARFGAILPSEAEKGLRLSAVFSNPLNCCSSSSSKLSGSIAMSIRGDCTFTAKAEVAQS 120

Query: 251 GGAAGMLVINNEED 210
           GGA  +LVIN+EE+
Sbjct: 121 GGAEALLVINDEEE 134



 Score = 42.7 bits (99), Expect(2) = 1e-23
 Identities = 21/42 (50%), Positives = 27/42 (64%)
 Frame = -2

Query: 126 LPVMDCPNNTQTLNITIPSVVIIKSDGEALNKAMTGGSRVEL 1
           L  M C N +   NI+IP V+I KS GE LNK+M  G +VE+
Sbjct: 135 LAEMGCDNGSAAPNISIPVVLIPKSGGEYLNKSMVAGQKVEI 176


>gb|ABK92483.1| unknown [Populus trichocarpa]
          Length = 540

 Score = 92.0 bits (227), Expect(2) = 7e-23
 Identities = 47/75 (62%), Positives = 55/75 (73%)
 Frame = -3

Query: 434 GLGARFGAALPTREKEGLRLSASIPNPLDCCSTLSSMFSGSIALCRRGSCDFSTKAVVAQ 255
           G+ ARFGA LP  EK   RL+A   NPL+ CS  SS  SGSIA+  RG CDF+TKA VAQ
Sbjct: 69  GITARFGAFLPKEEKNSYRLTAVFSNPLNGCSPSSSKLSGSIAMAVRGGCDFTTKAEVAQ 128

Query: 254 SGGAAGMLVINNEED 210
           SGGAA +LVIN+EE+
Sbjct: 129 SGGAAALLVINDEEE 143



 Score = 40.0 bits (92), Expect(2) = 7e-23
 Identities = 19/42 (45%), Positives = 27/42 (64%)
 Frame = -2

Query: 126 LPVMDCPNNTQTLNITIPSVVIIKSDGEALNKAMTGGSRVEL 1
           L  M C   T   +I+IP V+I KS G++LNK++  G +VEL
Sbjct: 144 LAEMGCEKGTSAQDISIPVVLIPKSGGQSLNKSIVNGQKVEL 185


>ref|XP_002321110.1| predicted protein [Populus trichocarpa] gi|222861883|gb|EEE99425.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score = 93.2 bits (230), Expect(2) = 1e-22
 Identities = 45/75 (60%), Positives = 57/75 (76%)
 Frame = -3

Query: 434 GLGARFGAALPTREKEGLRLSASIPNPLDCCSTLSSMFSGSIALCRRGSCDFSTKAVVAQ 255
           G+ ARFGA LP  E+ G+RL+A   NPL+ CS  SS  SGS+A+  RG CDF+TKA VAQ
Sbjct: 58  GITARFGALLPKEERNGVRLTAIFSNPLNSCSPSSSKLSGSVAMAVRGDCDFTTKAKVAQ 117

Query: 254 SGGAAGMLVINNEED 210
           SGGAA +LVIN++E+
Sbjct: 118 SGGAAALLVINDKEE 132



 Score = 38.1 bits (87), Expect(2) = 1e-22
 Identities = 17/42 (40%), Positives = 28/42 (66%)
 Frame = -2

Query: 126 LPVMDCPNNTQTLNITIPSVVIIKSDGEALNKAMTGGSRVEL 1
           L  M C  ++   +++IP V+I KS GE+LN+++  G +VEL
Sbjct: 133 LAEMGCEKDSSAQDVSIPVVLIPKSGGESLNRSVVDGQKVEL 174


>ref|XP_002301641.1| predicted protein [Populus trichocarpa] gi|222843367|gb|EEE80914.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score = 90.5 bits (223), Expect(2) = 2e-22
 Identities = 46/75 (61%), Positives = 54/75 (72%)
 Frame = -3

Query: 434 GLGARFGAALPTREKEGLRLSASIPNPLDCCSTLSSMFSGSIALCRRGSCDFSTKAVVAQ 255
           G+ ARFG  LP  EK   RL+A   NPL+ CS  SS  SGSIA+  RG CDF+TKA VAQ
Sbjct: 69  GITARFGVFLPKEEKNSYRLTAVFSNPLNGCSPSSSKLSGSIAMAVRGGCDFTTKAEVAQ 128

Query: 254 SGGAAGMLVINNEED 210
           SGGAA +LVIN+EE+
Sbjct: 129 SGGAAALLVINDEEE 143



 Score = 40.0 bits (92), Expect(2) = 2e-22
 Identities = 19/42 (45%), Positives = 27/42 (64%)
 Frame = -2

Query: 126 LPVMDCPNNTQTLNITIPSVVIIKSDGEALNKAMTGGSRVEL 1
           L  M C   T   +I+IP V+I KS G++LNK++  G +VEL
Sbjct: 144 LAEMGCEKGTSAQDISIPVVLIPKSGGQSLNKSIVNGQKVEL 185


>ref|XP_002268575.1| PREDICTED: signal peptide peptidase-like 2B [Vitis vinifera]
           gi|296089635|emb|CBI39454.3| unnamed protein product
           [Vitis vinifera]
          Length = 533

 Score = 89.7 bits (221), Expect(2) = 3e-22
 Identities = 46/75 (61%), Positives = 53/75 (70%)
 Frame = -3

Query: 434 GLGARFGAALPTREKEGLRLSASIPNPLDCCSTLSSMFSGSIALCRRGSCDFSTKAVVAQ 255
           GL ARFGA+LPT   + LRL A   NP++CCS  SS  SGSIAL  RG C F  KA VAQ
Sbjct: 62  GLTARFGASLPTEAHDHLRLPAVFSNPMNCCSDSSSELSGSIALSTRGDCSFMAKAKVAQ 121

Query: 254 SGGAAGMLVINNEED 210
           SG AA +LVIN++ED
Sbjct: 122 SGDAAALLVINDKED 136



 Score = 40.0 bits (92), Expect(2) = 3e-22
 Identities = 19/39 (48%), Positives = 26/39 (66%)
 Frame = -2

Query: 117 MDCPNNTQTLNITIPSVVIIKSDGEALNKAMTGGSRVEL 1
           M C  N   +NITIP V+I KS G+ L+K++  G +VEL
Sbjct: 140 MVCSENDTIVNITIPVVMIPKSGGDTLSKSIADGKKVEL 178


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