BLASTX nr result

ID: Panax21_contig00002320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002320
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279542.1| PREDICTED: uncharacterized protein LOC100251...   121   1e-25
emb|CAN80748.1| hypothetical protein VITISV_040485 [Vitis vinifera]   121   1e-25
ref|XP_002319512.1| predicted protein [Populus trichocarpa] gi|2...   109   7e-22
ref|XP_002512438.1| DNA binding protein, putative [Ricinus commu...   107   3e-21
ref|XP_004135599.1| PREDICTED: uncharacterized protein LOC101202...   100   5e-19

>ref|XP_002279542.1| PREDICTED: uncharacterized protein LOC100251003 [Vitis vinifera]
          Length = 423

 Score =  121 bits (304), Expect = 1e-25
 Identities = 62/106 (58%), Positives = 72/106 (67%)
 Frame = -2

Query: 729 TRRSNSHRSLAQVGPVASSSDQXXXXXXXXXXXSTGRNFSEAENTPPNRYHTWEREHFPS 550
           TRRS SHR LAQVGPVASSSDQ            +GRNF EAEN  P R+H WEREH PS
Sbjct: 319 TRRSGSHRGLAQVGPVASSSDQSSGFYFFPSGT-SGRNFQEAENPLPTRFHGWEREHLPS 377

Query: 549 YAMNQVDRDPIWGPIHHLGGGSSDTGLWSTTFRQRHGSDRMPSQHR 412
           + + QV+RD  WG  H  G G SD+G+  ++FRQRHGSDR  SQ+R
Sbjct: 378 FPLTQVERDSGWGAFHQAGSG-SDSGIRPSSFRQRHGSDRTSSQNR 422


>emb|CAN80748.1| hypothetical protein VITISV_040485 [Vitis vinifera]
          Length = 439

 Score =  121 bits (304), Expect = 1e-25
 Identities = 62/106 (58%), Positives = 72/106 (67%)
 Frame = -2

Query: 729 TRRSNSHRSLAQVGPVASSSDQXXXXXXXXXXXSTGRNFSEAENTPPNRYHTWEREHFPS 550
           TRRS SHR LAQVGPVASSSDQ            +GRNF EAEN  P R+H WEREH PS
Sbjct: 335 TRRSGSHRGLAQVGPVASSSDQSSGFYFFPSGT-SGRNFQEAENPLPTRFHGWEREHLPS 393

Query: 549 YAMNQVDRDPIWGPIHHLGGGSSDTGLWSTTFRQRHGSDRMPSQHR 412
           + + QV+RD  WG  H  G G SD+G+  ++FRQRHGSDR  SQ+R
Sbjct: 394 FPLTQVERDSGWGAFHQAGSG-SDSGIRPSSFRQRHGSDRTSSQNR 438


>ref|XP_002319512.1| predicted protein [Populus trichocarpa] gi|222857888|gb|EEE95435.1|
           predicted protein [Populus trichocarpa]
          Length = 403

 Score =  109 bits (272), Expect = 7e-22
 Identities = 58/107 (54%), Positives = 72/107 (67%), Gaps = 1/107 (0%)
 Frame = -2

Query: 729 TRRSNSHRSLAQVGPVASSSDQXXXXXXXXXXXSTGRNFSEAENTPP-NRYHTWEREHFP 553
           +RRS+SHR ++QVG VASSSDQ            +GRNF EAEN PP  R+ +WER+H P
Sbjct: 303 SRRSSSHRGMSQVGAVASSSDQTGFYFIPSGA--SGRNFQEAENPPPPTRFRSWERDHLP 360

Query: 552 SYAMNQVDRDPIWGPIHHLGGGSSDTGLWSTTFRQRHGSDRMPSQHR 412
           S+++NQVDRD  W   H  GGG  D G+    FRQRHGS+RM SQ+R
Sbjct: 361 SFSLNQVDRDSGWSTFHQAGGG-PDPGI---RFRQRHGSERMSSQNR 403


>ref|XP_002512438.1| DNA binding protein, putative [Ricinus communis]
           gi|223548399|gb|EEF49890.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 430

 Score =  107 bits (266), Expect = 3e-21
 Identities = 53/106 (50%), Positives = 73/106 (68%)
 Frame = -2

Query: 729 TRRSNSHRSLAQVGPVASSSDQXXXXXXXXXXXSTGRNFSEAENTPPNRYHTWEREHFPS 550
           TRRS+++R L+QVGPVASSSDQ            +GRNF EA+N+PP R+  WER+H   
Sbjct: 328 TRRSSNYRGLSQVGPVASSSDQTGFYFVPPGT--SGRNFQEADNSPPIRFRAWERDHLQP 385

Query: 549 YAMNQVDRDPIWGPIHHLGGGSSDTGLWSTTFRQRHGSDRMPSQHR 412
           ++++QVDR+  W  + H     SD GL S++FRQRHG++RM SQ+R
Sbjct: 386 FSLSQVDRESSW--LFHQTASGSDPGLRSSSFRQRHGTERMSSQNR 429


>ref|XP_004135599.1| PREDICTED: uncharacterized protein LOC101202738 [Cucumis sativus]
           gi|449485690|ref|XP_004157246.1| PREDICTED:
           uncharacterized LOC101202738 [Cucumis sativus]
          Length = 429

 Score = 99.8 bits (247), Expect = 5e-19
 Identities = 52/104 (50%), Positives = 69/104 (66%)
 Frame = -2

Query: 726 RRSNSHRSLAQVGPVASSSDQXXXXXXXXXXXSTGRNFSEAENTPPNRYHTWEREHFPSY 547
           RRS++HR L+Q  P+ASSS+Q             GR+F + EN  PNR+H WEREH PS+
Sbjct: 328 RRSSNHRGLSQA-PMASSSEQPSGFYFYSSAS-AGRSF-QPENAMPNRFHAWEREHLPSF 384

Query: 546 AMNQVDRDPIWGPIHHLGGGSSDTGLWSTTFRQRHGSDRMPSQH 415
            ++Q+DRDP WG IH  G   SD  + S++FRQRHGS+R  SQ+
Sbjct: 385 GLSQIDRDPGWGEIHQ-GASVSDPNIRSSSFRQRHGSERTSSQN 427


Top