BLASTX nr result

ID: Panax21_contig00002297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002297
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283513.1| PREDICTED: ribosome production factor 2 homo...   175   3e-42
ref|XP_004137872.1| PREDICTED: ribosome production factor 2 homo...   165   4e-39
ref|XP_002528588.1| brix domain containing protein, putative [Ri...   162   2e-38
ref|XP_002321663.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|XP_004161267.1| PREDICTED: ribosome production factor 2 homo...   158   4e-37

>ref|XP_002283513.1| PREDICTED: ribosome production factor 2 homolog [Vitis vinifera]
           gi|297740066|emb|CBI30248.3| unnamed protein product
           [Vitis vinifera]
          Length = 315

 Score =  175 bits (444), Expect = 3e-42
 Identities = 87/116 (75%), Positives = 99/116 (85%)
 Frame = -3

Query: 479 VFFTHCALRLKKSGTIVPRMELVEVGPSMDLVIRRHRLPDEGLRKESMKTAPELXXXXXK 300
           VFFTHCA+RLKKSGTIVPRMELVEVGPSMDLV+RRHRLP++ +RKE+MKTA E      K
Sbjct: 197 VFFTHCAMRLKKSGTIVPRMELVEVGPSMDLVVRRHRLPNDSVRKEAMKTAKEQPKKKVK 256

Query: 299 NVSGDIIEGKIGKIYIPDQQVGSVLLPNKSKGLKRERREAKMKGEANTSAEKKPKQ 132
           NVS D+I+GK+GKIY+PDQQVGSV LP K+KGLKRERREAKMK E N  A KK K+
Sbjct: 257 NVSQDVIQGKVGKIYVPDQQVGSVALPYKAKGLKRERREAKMKHETNDRAPKKQKE 312


>ref|XP_004137872.1| PREDICTED: ribosome production factor 2 homolog [Cucumis sativus]
          Length = 322

 Score =  165 bits (417), Expect = 4e-39
 Identities = 82/116 (70%), Positives = 97/116 (83%)
 Frame = -3

Query: 479 VFFTHCALRLKKSGTIVPRMELVEVGPSMDLVIRRHRLPDEGLRKESMKTAPELXXXXXK 300
           VF THCALRLKKSG++VPRMELVEVGPSMD+VIRRHRLP +GLRKE+MKTA +      K
Sbjct: 197 VFLTHCALRLKKSGSVVPRMELVEVGPSMDMVIRRHRLPTDGLRKEAMKTAKDKAKKKEK 256

Query: 299 NVSGDIIEGKIGKIYIPDQQVGSVLLPNKSKGLKRERREAKMKGEANTSAEKKPKQ 132
           NVS DII+GKIG+IYIPDQ+VG + + +KSKG+KRERREAKMK   +  A KKPK+
Sbjct: 257 NVSKDIIQGKIGRIYIPDQKVGDMAIVDKSKGVKRERREAKMKNRDDGPASKKPKE 312


>ref|XP_002528588.1| brix domain containing protein, putative [Ricinus communis]
           gi|223531984|gb|EEF33796.1| brix domain containing
           protein, putative [Ricinus communis]
          Length = 315

 Score =  162 bits (411), Expect = 2e-38
 Identities = 77/116 (66%), Positives = 96/116 (82%)
 Frame = -3

Query: 479 VFFTHCALRLKKSGTIVPRMELVEVGPSMDLVIRRHRLPDEGLRKESMKTAPELXXXXXK 300
           VF THCA+RLKKSGT++PR+EL+EVGPSMDLV+RRHRLP++ LRKE+MKTA +      K
Sbjct: 197 VFLTHCAIRLKKSGTVIPRIELIEVGPSMDLVVRRHRLPNDSLRKEAMKTAKDKLKKKIK 256

Query: 299 NVSGDIIEGKIGKIYIPDQQVGSVLLPNKSKGLKRERREAKMKGEANTSAEKKPKQ 132
           NVS D I+GK+G+IYIPDQ++G + LP+KSKG+KRERREAKMK   N  A KK K+
Sbjct: 257 NVSADAIQGKLGRIYIPDQKIGEMALPDKSKGVKRERREAKMKNGNNEHASKKQKE 312


>ref|XP_002321663.1| predicted protein [Populus trichocarpa] gi|222868659|gb|EEF05790.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score =  162 bits (409), Expect = 3e-38
 Identities = 78/116 (67%), Positives = 95/116 (81%)
 Frame = -3

Query: 479 VFFTHCALRLKKSGTIVPRMELVEVGPSMDLVIRRHRLPDEGLRKESMKTAPELXXXXXK 300
           VF THCA+RLKKSGTIVPR+ELVE+GPSMD V+RRHRLP+E LRKE+MKTA +      K
Sbjct: 197 VFLTHCAMRLKKSGTIVPRIELVEIGPSMDFVVRRHRLPNESLRKEAMKTAKDKLHKKIK 256

Query: 299 NVSGDIIEGKIGKIYIPDQQVGSVLLPNKSKGLKRERREAKMKGEANTSAEKKPKQ 132
           NVS D ++GK+GKIY+PDQ+VG + LPNK+KG+KRERREAK+K   N  A KK K+
Sbjct: 257 NVSKDALQGKLGKIYVPDQKVGEMPLPNKAKGVKRERREAKVKNSNNERASKKQKE 312


>ref|XP_004161267.1| PREDICTED: ribosome production factor 2 homolog [Cucumis sativus]
          Length = 386

 Score =  158 bits (400), Expect = 4e-37
 Identities = 79/116 (68%), Positives = 95/116 (81%)
 Frame = -3

Query: 479 VFFTHCALRLKKSGTIVPRMELVEVGPSMDLVIRRHRLPDEGLRKESMKTAPELXXXXXK 300
           VF THCALRLKKSG++VPRMELVEVGPSMD+VIRRHRLP +GLRKE+MKTA +      K
Sbjct: 197 VFLTHCALRLKKSGSVVPRMELVEVGPSMDMVIRRHRLPTDGLRKEAMKTAKDKAKKKEK 256

Query: 299 NVSGDIIEGKIGKIYIPDQQVGSVLLPNKSKGLKRERREAKMKGEANTSAEKKPKQ 132
           NVS DII+GKIG+IYIPDQ+VG + + +KSKG+KRERREAKMK   +  A K  ++
Sbjct: 257 NVSKDIIQGKIGRIYIPDQKVGDMAIVDKSKGVKRERREAKMKNRDDGPASKNQRK 312


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