BLASTX nr result

ID: Panax21_contig00002295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002295
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234871.1| auxin response factor 1 [Solanum lycopersicu...    59   4e-07
ref|XP_002268348.1| PREDICTED: auxin response factor 1 [Vitis vi...    55   6e-06

>ref|NP_001234871.1| auxin response factor 1 [Solanum lycopersicum]
           gi|299118178|gb|ADJ10892.1| auxin response factor 1
           [Solanum lycopersicum]
          Length = 654

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/40 (72%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
 Frame = -2

Query: 118 MAHIAAANHFSGEARSGASSD-ALFKELWHACAGPLVTVP 2
           MAH+AA NHF G    GAS++ AL+KELWHACAGPLVTVP
Sbjct: 1   MAHVAA-NHFGGGTHPGASANNALYKELWHACAGPLVTVP 39


>ref|XP_002268348.1| PREDICTED: auxin response factor 1 [Vitis vinifera]
           gi|297739458|emb|CBI29640.3| unnamed protein product
           [Vitis vinifera]
          Length = 678

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = -2

Query: 109 IAAANHFSGEARSGASSDALFKELWHACAGPLVTVP 2
           + A+N+ SG   +GA  DAL+KELWHACAGPLVTVP
Sbjct: 3   LVASNYPSGGPHAGAPCDALYKELWHACAGPLVTVP 38


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