BLASTX nr result

ID: Panax21_contig00002284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002284
         (732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADI80347.1| 3-hydroxy-3-methylglutaryl coenzyme A synthase [P...   142   5e-32
gb|ACD87446.1| 3-hydroxy-3-methylglutaryl-CoA synthase [Camptoth...   132   7e-29
gb|AFC34137.1| 3-hydroxy-3-methylglutaryl-CoA synthase [Camellia...   130   3e-28
dbj|BAF98279.1| hydroxymethylglutaryl-CoA synthase [Hevea brasil...   128   1e-27
gb|AAS46245.1| HMG-CoA synthase 2 [Hevea brasiliensis]                128   1e-27

>gb|ADI80347.1| 3-hydroxy-3-methylglutaryl coenzyme A synthase [Panax ginseng]
          Length = 468

 Score =  142 bits (359), Expect = 5e-32
 Identities = 68/75 (90%), Positives = 71/75 (94%)
 Frame = -1

Query: 732 LKSRNEFPPEKFVEIMKLMEHRYGAKDFVTSKDCSLLSPGTYYLTEVDSMYRRFYAKKAV 553
           LKSR+EFPPEKFVEIMKLMEHRYGAKDF TSKDCSLLSPGTYYLT VDSMYRRFYAKKAV
Sbjct: 394 LKSRHEFPPEKFVEIMKLMEHRYGAKDFDTSKDCSLLSPGTYYLTAVDSMYRRFYAKKAV 453

Query: 552 DKTIGTENGTLANGH 508
           +KT  TENG+LANGH
Sbjct: 454 EKTTSTENGSLANGH 468


>gb|ACD87446.1| 3-hydroxy-3-methylglutaryl-CoA synthase [Camptotheca acuminata]
          Length = 471

 Score =  132 bits (332), Expect = 7e-29
 Identities = 65/77 (84%), Positives = 68/77 (88%), Gaps = 2/77 (2%)
 Frame = -1

Query: 732 LKSRNEFPPEKFVEIMKLMEHRYGAKDFVTSKDCSLLSPGTYYLTEVDSMYRRFYAKKAV 553
           LKSR+EFPPE FVE MKLMEHRYGAKDFVTSKDCSLLSPGTYYLTEVDSMYRRFYAKKA 
Sbjct: 395 LKSRHEFPPENFVETMKLMEHRYGAKDFVTSKDCSLLSPGTYYLTEVDSMYRRFYAKKAG 454

Query: 552 DKTIG--TENGTLANGH 508
           D   G   ENG+L+NGH
Sbjct: 455 DNITGKTCENGSLSNGH 471


>gb|AFC34137.1| 3-hydroxy-3-methylglutaryl-CoA synthase [Camellia sinensis]
          Length = 467

 Score =  130 bits (327), Expect = 3e-28
 Identities = 63/75 (84%), Positives = 67/75 (89%)
 Frame = -1

Query: 732 LKSRNEFPPEKFVEIMKLMEHRYGAKDFVTSKDCSLLSPGTYYLTEVDSMYRRFYAKKAV 553
           LKSR+EFPPEKFVE MK+MEHRYGAKDFVTSKDCSLL+PGTYYLTEVDSMYRRFYAKKA 
Sbjct: 395 LKSRHEFPPEKFVETMKVMEHRYGAKDFVTSKDCSLLAPGTYYLTEVDSMYRRFYAKKA- 453

Query: 552 DKTIGTENGTLANGH 508
             T   ENG+L NGH
Sbjct: 454 -STTACENGSLTNGH 467


>dbj|BAF98279.1| hydroxymethylglutaryl-CoA synthase [Hevea brasiliensis]
          Length = 464

 Score =  128 bits (321), Expect = 1e-27
 Identities = 61/75 (81%), Positives = 68/75 (90%)
 Frame = -1

Query: 732 LKSRNEFPPEKFVEIMKLMEHRYGAKDFVTSKDCSLLSPGTYYLTEVDSMYRRFYAKKAV 553
           LK+R+EFPPEKF  IMKLMEHRYGAKDFVTSKDCS+L+PGTYYLTEVD+MYRRFYA+KAV
Sbjct: 392 LKTRHEFPPEKFAVIMKLMEHRYGAKDFVTSKDCSILAPGTYYLTEVDTMYRRFYAQKAV 451

Query: 552 DKTIGTENGTLANGH 508
             T+  ENG LANGH
Sbjct: 452 GDTV--ENGLLANGH 464


>gb|AAS46245.1| HMG-CoA synthase 2 [Hevea brasiliensis]
          Length = 464

 Score =  128 bits (321), Expect = 1e-27
 Identities = 61/75 (81%), Positives = 68/75 (90%)
 Frame = -1

Query: 732 LKSRNEFPPEKFVEIMKLMEHRYGAKDFVTSKDCSLLSPGTYYLTEVDSMYRRFYAKKAV 553
           LK+R+EFPPEKF  IMKLMEHRYGAKDFVTSKDCS+L+PGTYYLTEVD+MYRRFYA+KAV
Sbjct: 392 LKTRHEFPPEKFAVIMKLMEHRYGAKDFVTSKDCSILAPGTYYLTEVDTMYRRFYAQKAV 451

Query: 552 DKTIGTENGTLANGH 508
             T+  ENG LANGH
Sbjct: 452 GDTV--ENGLLANGH 464


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