BLASTX nr result

ID: Panax21_contig00002275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002275
         (971 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281644.1| PREDICTED: uncharacterized protein LOC100252...   119   1e-24
emb|CAN65462.1| hypothetical protein VITISV_002198 [Vitis vinifera]   118   2e-24
gb|ABK95394.1| unknown [Populus trichocarpa]                          117   3e-24
ref|XP_002311547.1| predicted protein [Populus trichocarpa] gi|2...   115   1e-23
ref|XP_002527549.1| conserved hypothetical protein [Ricinus comm...   115   2e-23

>ref|XP_002281644.1| PREDICTED: uncharacterized protein LOC100252594 [Vitis vinifera]
          Length = 698

 Score =  119 bits (297), Expect = 1e-24
 Identities = 61/107 (57%), Positives = 75/107 (70%), Gaps = 12/107 (11%)
 Frame = -2

Query: 436 VKEYNMDPNETTQ------------KLLLQVDGMKLYEELLDGSEIANLVTLVNDLRTVG 293
           V+  N  PN TT             K +  VDG+KLYEEL D SE++  V+LVNDLR  G
Sbjct: 258 VQNQNEKPNPTTSPKTFVGTEIFDGKAVNVVDGLKLYEELFDDSEVSKFVSLVNDLRAAG 317

Query: 292 RRGQF*GQTFVLSKRPMRGHVREMIQLGLPVADAPPEDETIAGTSKE 152
           +RGQ  GQTFV+SKRPM+GH REMIQLG+P+ADAP EDE++ GTSK+
Sbjct: 318 KRGQLQGQTFVVSKRPMKGHGREMIQLGVPIADAPLEDESVVGTSKD 364


>emb|CAN65462.1| hypothetical protein VITISV_002198 [Vitis vinifera]
          Length = 1145

 Score =  118 bits (295), Expect = 2e-24
 Identities = 61/106 (57%), Positives = 74/106 (69%), Gaps = 12/106 (11%)
 Frame = -2

Query: 436 VKEYNMDPNETTQ------------KLLLQVDGMKLYEELLDGSEIANLVTLVNDLRTVG 293
           V+  N  PN TT             K +  VDG+KLYEEL D SE++  V+LVNDLR  G
Sbjct: 267 VQNQNEKPNPTTSPKTFVGTEIFDGKAVNVVDGLKLYEELFDDSEVSKFVSLVNDLRAAG 326

Query: 292 RRGQF*GQTFVLSKRPMRGHVREMIQLGLPVADAPPEDETIAGTSK 155
           +RGQ  GQTFV+SKRPM+GH REMIQLG+P+ADAP EDE++ GTSK
Sbjct: 327 KRGQLQGQTFVVSKRPMKGHGREMIQLGVPIADAPLEDESVVGTSK 372


>gb|ABK95394.1| unknown [Populus trichocarpa]
          Length = 694

 Score =  117 bits (294), Expect = 3e-24
 Identities = 56/77 (72%), Positives = 65/77 (84%)
 Frame = -2

Query: 382 VDGMKLYEELLDGSEIANLVTLVNDLRTVGRRGQF*GQTFVLSKRPMRGHVREMIQLGLP 203
           VDG+KLYE LLDG E++ LV+LVN+LR  GRRGQ  GQT++LSKRPM+GH REMIQLGLP
Sbjct: 291 VDGLKLYENLLDGLEVSKLVSLVNELRATGRRGQCQGQTYILSKRPMKGHGREMIQLGLP 350

Query: 202 VADAPPEDETIAGTSKE 152
           +ADAP EDE   GTSKE
Sbjct: 351 IADAPAEDENATGTSKE 367


>ref|XP_002311547.1| predicted protein [Populus trichocarpa] gi|222851367|gb|EEE88914.1|
           predicted protein [Populus trichocarpa]
          Length = 630

 Score =  115 bits (289), Expect = 1e-23
 Identities = 55/76 (72%), Positives = 64/76 (84%)
 Frame = -2

Query: 382 VDGMKLYEELLDGSEIANLVTLVNDLRTVGRRGQF*GQTFVLSKRPMRGHVREMIQLGLP 203
           VDG+KLYE LLDG E++ LV+LVN+LR  GRRGQ  GQT++LSKRPM+GH REMIQLGLP
Sbjct: 273 VDGLKLYENLLDGLEVSKLVSLVNELRATGRRGQCQGQTYILSKRPMKGHGREMIQLGLP 332

Query: 202 VADAPPEDETIAGTSK 155
           +ADAP EDE   GTSK
Sbjct: 333 IADAPAEDENATGTSK 348


>ref|XP_002527549.1| conserved hypothetical protein [Ricinus communis]
           gi|223533099|gb|EEF34858.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 697

 Score =  115 bits (288), Expect = 2e-23
 Identities = 54/77 (70%), Positives = 66/77 (85%)
 Frame = -2

Query: 382 VDGMKLYEELLDGSEIANLVTLVNDLRTVGRRGQF*GQTFVLSKRPMRGHVREMIQLGLP 203
           VDG+KLYE+LLD  E++ LV+LVNDLR  GR+GQF GQ +V+SKRPM+GH REMIQLGLP
Sbjct: 294 VDGLKLYEQLLDDVEVSKLVSLVNDLRAAGRKGQFQGQAYVVSKRPMKGHGREMIQLGLP 353

Query: 202 VADAPPEDETIAGTSKE 152
           +ADAP E+E  AGTSK+
Sbjct: 354 IADAPAEEENAAGTSKD 370


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