BLASTX nr result
ID: Panax21_contig00002272
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00002272 (1760 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272751.1| PREDICTED: ribosomal RNA-processing protein ... 332 3e-88 emb|CAN65396.1| hypothetical protein VITISV_009442 [Vitis vinifera] 330 6e-88 ref|XP_002521480.1| Cerebral protein, putative [Ricinus communis... 321 3e-85 emb|CBI34852.3| unnamed protein product [Vitis vinifera] 320 6e-85 ref|XP_002298548.1| predicted protein [Populus trichocarpa] gi|2... 318 4e-84 >ref|XP_002272751.1| PREDICTED: ribosomal RNA-processing protein 8 [Vitis vinifera] Length = 263 Score = 332 bits (850), Expect = 3e-88 Identities = 156/188 (82%), Positives = 173/188 (92%) Frame = -1 Query: 569 SSKPSTFLDKMKARLSGGHFRMINEKLYTCSGDEALNYFKEDPSLFSMYHAGYQEQMSHW 390 S S+FLDKM+ARLSGGHFRMINEKLYTC+G EAL+YF+EDP+LF++YH GYQEQMSHW Sbjct: 34 SKSSSSFLDKMRARLSGGHFRMINEKLYTCTGSEALSYFEEDPALFNVYHVGYQEQMSHW 93 Query: 389 PEQPVNIIIKWLNYHSPSLVVADFGCGDARLARTVKNKVFSIDLVSDNPSIIACDMSNTP 210 P+QPVNIIIKWL HSPSL+VADFGCGDARLAR VKNKVFS DLVS +PS+I CDMSNTP Sbjct: 94 PQQPVNIIIKWLKDHSPSLIVADFGCGDARLARNVKNKVFSFDLVSSDPSVIVCDMSNTP 153 Query: 209 LDSSSIDVSVFCLSLMGTNFPSYLQEAQRVLKPCGWLLIAEVKSRFDPTTGGADPDRFSK 30 L+SSSIDV+VFCLSLMGTNF SYLQEA RVLKPCGWLLIAEVKSRFDP+ GGADP+RFSK Sbjct: 154 LESSSIDVAVFCLSLMGTNFSSYLQEAHRVLKPCGWLLIAEVKSRFDPSNGGADPNRFSK 213 Query: 29 AIRELGFT 6 AI +LGFT Sbjct: 214 AICKLGFT 221 >emb|CAN65396.1| hypothetical protein VITISV_009442 [Vitis vinifera] Length = 237 Score = 330 bits (847), Expect = 6e-88 Identities = 155/183 (84%), Positives = 172/183 (93%) Frame = -1 Query: 554 TFLDKMKARLSGGHFRMINEKLYTCSGDEALNYFKEDPSLFSMYHAGYQEQMSHWPEQPV 375 +FLDKM+ARLSGGHFRMINEKLYTC+G EAL+YF+EDP+LF++YHAGYQEQMSHWP+QPV Sbjct: 13 SFLDKMRARLSGGHFRMINEKLYTCTGSEALSYFEEDPALFNVYHAGYQEQMSHWPQQPV 72 Query: 374 NIIIKWLNYHSPSLVVADFGCGDARLARTVKNKVFSIDLVSDNPSIIACDMSNTPLDSSS 195 NIIIKWL HSPSL+VADFGCGDARLAR VKNKVFS DLVS +PS+I CDMSNTPL+SSS Sbjct: 73 NIIIKWLKDHSPSLIVADFGCGDARLARNVKNKVFSFDLVSSDPSVIVCDMSNTPLESSS 132 Query: 194 IDVSVFCLSLMGTNFPSYLQEAQRVLKPCGWLLIAEVKSRFDPTTGGADPDRFSKAIREL 15 IDV+VFCLSLMGTNF SYLQEA RVLKPCGWLLIAEVKSRFDP+ GGADP+RFSKAI +L Sbjct: 133 IDVAVFCLSLMGTNFSSYLQEAHRVLKPCGWLLIAEVKSRFDPSNGGADPNRFSKAICKL 192 Query: 14 GFT 6 GFT Sbjct: 193 GFT 195 >ref|XP_002521480.1| Cerebral protein, putative [Ricinus communis] gi|223539379|gb|EEF40970.1| Cerebral protein, putative [Ricinus communis] Length = 264 Score = 321 bits (823), Expect = 3e-85 Identities = 153/204 (75%), Positives = 175/204 (85%), Gaps = 3/204 (1%) Frame = -1 Query: 605 FSIHNDTNTIRNSSKP---STFLDKMKARLSGGHFRMINEKLYTCSGDEALNYFKEDPSL 435 F+ + +S +P S+FL+KM+ARLSGGHFRM+NEKLYTC+GDEALNYFK+DPSL Sbjct: 21 FNSEAEPTNSASSKRPKSSSSFLEKMRARLSGGHFRMLNEKLYTCTGDEALNYFKDDPSL 80 Query: 434 FSMYHAGYQEQMSHWPEQPVNIIIKWLNYHSPSLVVADFGCGDARLARTVKNKVFSIDLV 255 F MYHAGYQEQMSHWPEQPVNIII WL + SLVVADFGCGDARLA+ VKNKV+S DLV Sbjct: 81 FDMYHAGYQEQMSHWPEQPVNIIINWLKNRNSSLVVADFGCGDARLAKNVKNKVYSFDLV 140 Query: 254 SDNPSIIACDMSNTPLDSSSIDVSVFCLSLMGTNFPSYLQEAQRVLKPCGWLLIAEVKSR 75 S +PS+IACDMS TPLD+SS+DV+VFCLSLMGTNFP YLQEA RVLKP GWLLIAEVKSR Sbjct: 141 SSDPSVIACDMSKTPLDASSVDVAVFCLSLMGTNFPRYLQEAHRVLKPSGWLLIAEVKSR 200 Query: 74 FDPTTGGADPDRFSKAIRELGFTS 3 FDP+TGGAD + FSKA+ +LGF S Sbjct: 201 FDPSTGGADANEFSKAVTDLGFAS 224 >emb|CBI34852.3| unnamed protein product [Vitis vinifera] Length = 220 Score = 320 bits (821), Expect = 6e-85 Identities = 150/178 (84%), Positives = 166/178 (93%) Frame = -1 Query: 539 MKARLSGGHFRMINEKLYTCSGDEALNYFKEDPSLFSMYHAGYQEQMSHWPEQPVNIIIK 360 M+ARLSGGHFRMINEKLYTC+G EAL+YF+EDP+LF++YH GYQEQMSHWP+QPVNIIIK Sbjct: 1 MRARLSGGHFRMINEKLYTCTGSEALSYFEEDPALFNVYHVGYQEQMSHWPQQPVNIIIK 60 Query: 359 WLNYHSPSLVVADFGCGDARLARTVKNKVFSIDLVSDNPSIIACDMSNTPLDSSSIDVSV 180 WL HSPSL+VADFGCGDARLAR VKNKVFS DLVS +PS+I CDMSNTPL+SSSIDV+V Sbjct: 61 WLKDHSPSLIVADFGCGDARLARNVKNKVFSFDLVSSDPSVIVCDMSNTPLESSSIDVAV 120 Query: 179 FCLSLMGTNFPSYLQEAQRVLKPCGWLLIAEVKSRFDPTTGGADPDRFSKAIRELGFT 6 FCLSLMGTNF SYLQEA RVLKPCGWLLIAEVKSRFDP+ GGADP+RFSKAI +LGFT Sbjct: 121 FCLSLMGTNFSSYLQEAHRVLKPCGWLLIAEVKSRFDPSNGGADPNRFSKAICKLGFT 178 >ref|XP_002298548.1| predicted protein [Populus trichocarpa] gi|222845806|gb|EEE83353.1| predicted protein [Populus trichocarpa] Length = 220 Score = 318 bits (814), Expect = 4e-84 Identities = 151/179 (84%), Positives = 164/179 (91%) Frame = -1 Query: 539 MKARLSGGHFRMINEKLYTCSGDEALNYFKEDPSLFSMYHAGYQEQMSHWPEQPVNIIIK 360 M+ARLSGGHFRMINEKLYTC+GDEAL+YFKEDPSLF MYH GYQEQMSHWPEQPVNIII+ Sbjct: 1 MRARLSGGHFRMINEKLYTCTGDEALDYFKEDPSLFDMYHTGYQEQMSHWPEQPVNIIIQ 60 Query: 359 WLNYHSPSLVVADFGCGDARLARTVKNKVFSIDLVSDNPSIIACDMSNTPLDSSSIDVSV 180 WL S SLVVADFGCGDARLA+ VKNKVFS DLVS++PS+IACDMSNTPLD+SSIDV+V Sbjct: 61 WLKARSSSLVVADFGCGDARLAKNVKNKVFSFDLVSNDPSVIACDMSNTPLDASSIDVAV 120 Query: 179 FCLSLMGTNFPSYLQEAQRVLKPCGWLLIAEVKSRFDPTTGGADPDRFSKAIRELGFTS 3 FCLSLMGTNFPSYL+EA RVLKP GWLLIAEVKSR DP TGGADP FSK+I +LGFTS Sbjct: 121 FCLSLMGTNFPSYLEEAHRVLKPSGWLLIAEVKSRLDPNTGGADPKMFSKSISDLGFTS 179