BLASTX nr result

ID: Panax21_contig00002272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002272
         (1760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272751.1| PREDICTED: ribosomal RNA-processing protein ...   332   3e-88
emb|CAN65396.1| hypothetical protein VITISV_009442 [Vitis vinifera]   330   6e-88
ref|XP_002521480.1| Cerebral protein, putative [Ricinus communis...   321   3e-85
emb|CBI34852.3| unnamed protein product [Vitis vinifera]              320   6e-85
ref|XP_002298548.1| predicted protein [Populus trichocarpa] gi|2...   318   4e-84

>ref|XP_002272751.1| PREDICTED: ribosomal RNA-processing protein 8 [Vitis vinifera]
          Length = 263

 Score =  332 bits (850), Expect = 3e-88
 Identities = 156/188 (82%), Positives = 173/188 (92%)
 Frame = -1

Query: 569 SSKPSTFLDKMKARLSGGHFRMINEKLYTCSGDEALNYFKEDPSLFSMYHAGYQEQMSHW 390
           S   S+FLDKM+ARLSGGHFRMINEKLYTC+G EAL+YF+EDP+LF++YH GYQEQMSHW
Sbjct: 34  SKSSSSFLDKMRARLSGGHFRMINEKLYTCTGSEALSYFEEDPALFNVYHVGYQEQMSHW 93

Query: 389 PEQPVNIIIKWLNYHSPSLVVADFGCGDARLARTVKNKVFSIDLVSDNPSIIACDMSNTP 210
           P+QPVNIIIKWL  HSPSL+VADFGCGDARLAR VKNKVFS DLVS +PS+I CDMSNTP
Sbjct: 94  PQQPVNIIIKWLKDHSPSLIVADFGCGDARLARNVKNKVFSFDLVSSDPSVIVCDMSNTP 153

Query: 209 LDSSSIDVSVFCLSLMGTNFPSYLQEAQRVLKPCGWLLIAEVKSRFDPTTGGADPDRFSK 30
           L+SSSIDV+VFCLSLMGTNF SYLQEA RVLKPCGWLLIAEVKSRFDP+ GGADP+RFSK
Sbjct: 154 LESSSIDVAVFCLSLMGTNFSSYLQEAHRVLKPCGWLLIAEVKSRFDPSNGGADPNRFSK 213

Query: 29  AIRELGFT 6
           AI +LGFT
Sbjct: 214 AICKLGFT 221


>emb|CAN65396.1| hypothetical protein VITISV_009442 [Vitis vinifera]
          Length = 237

 Score =  330 bits (847), Expect = 6e-88
 Identities = 155/183 (84%), Positives = 172/183 (93%)
 Frame = -1

Query: 554 TFLDKMKARLSGGHFRMINEKLYTCSGDEALNYFKEDPSLFSMYHAGYQEQMSHWPEQPV 375
           +FLDKM+ARLSGGHFRMINEKLYTC+G EAL+YF+EDP+LF++YHAGYQEQMSHWP+QPV
Sbjct: 13  SFLDKMRARLSGGHFRMINEKLYTCTGSEALSYFEEDPALFNVYHAGYQEQMSHWPQQPV 72

Query: 374 NIIIKWLNYHSPSLVVADFGCGDARLARTVKNKVFSIDLVSDNPSIIACDMSNTPLDSSS 195
           NIIIKWL  HSPSL+VADFGCGDARLAR VKNKVFS DLVS +PS+I CDMSNTPL+SSS
Sbjct: 73  NIIIKWLKDHSPSLIVADFGCGDARLARNVKNKVFSFDLVSSDPSVIVCDMSNTPLESSS 132

Query: 194 IDVSVFCLSLMGTNFPSYLQEAQRVLKPCGWLLIAEVKSRFDPTTGGADPDRFSKAIREL 15
           IDV+VFCLSLMGTNF SYLQEA RVLKPCGWLLIAEVKSRFDP+ GGADP+RFSKAI +L
Sbjct: 133 IDVAVFCLSLMGTNFSSYLQEAHRVLKPCGWLLIAEVKSRFDPSNGGADPNRFSKAICKL 192

Query: 14  GFT 6
           GFT
Sbjct: 193 GFT 195


>ref|XP_002521480.1| Cerebral protein, putative [Ricinus communis]
           gi|223539379|gb|EEF40970.1| Cerebral protein, putative
           [Ricinus communis]
          Length = 264

 Score =  321 bits (823), Expect = 3e-85
 Identities = 153/204 (75%), Positives = 175/204 (85%), Gaps = 3/204 (1%)
 Frame = -1

Query: 605 FSIHNDTNTIRNSSKP---STFLDKMKARLSGGHFRMINEKLYTCSGDEALNYFKEDPSL 435
           F+   +     +S +P   S+FL+KM+ARLSGGHFRM+NEKLYTC+GDEALNYFK+DPSL
Sbjct: 21  FNSEAEPTNSASSKRPKSSSSFLEKMRARLSGGHFRMLNEKLYTCTGDEALNYFKDDPSL 80

Query: 434 FSMYHAGYQEQMSHWPEQPVNIIIKWLNYHSPSLVVADFGCGDARLARTVKNKVFSIDLV 255
           F MYHAGYQEQMSHWPEQPVNIII WL   + SLVVADFGCGDARLA+ VKNKV+S DLV
Sbjct: 81  FDMYHAGYQEQMSHWPEQPVNIIINWLKNRNSSLVVADFGCGDARLAKNVKNKVYSFDLV 140

Query: 254 SDNPSIIACDMSNTPLDSSSIDVSVFCLSLMGTNFPSYLQEAQRVLKPCGWLLIAEVKSR 75
           S +PS+IACDMS TPLD+SS+DV+VFCLSLMGTNFP YLQEA RVLKP GWLLIAEVKSR
Sbjct: 141 SSDPSVIACDMSKTPLDASSVDVAVFCLSLMGTNFPRYLQEAHRVLKPSGWLLIAEVKSR 200

Query: 74  FDPTTGGADPDRFSKAIRELGFTS 3
           FDP+TGGAD + FSKA+ +LGF S
Sbjct: 201 FDPSTGGADANEFSKAVTDLGFAS 224


>emb|CBI34852.3| unnamed protein product [Vitis vinifera]
          Length = 220

 Score =  320 bits (821), Expect = 6e-85
 Identities = 150/178 (84%), Positives = 166/178 (93%)
 Frame = -1

Query: 539 MKARLSGGHFRMINEKLYTCSGDEALNYFKEDPSLFSMYHAGYQEQMSHWPEQPVNIIIK 360
           M+ARLSGGHFRMINEKLYTC+G EAL+YF+EDP+LF++YH GYQEQMSHWP+QPVNIIIK
Sbjct: 1   MRARLSGGHFRMINEKLYTCTGSEALSYFEEDPALFNVYHVGYQEQMSHWPQQPVNIIIK 60

Query: 359 WLNYHSPSLVVADFGCGDARLARTVKNKVFSIDLVSDNPSIIACDMSNTPLDSSSIDVSV 180
           WL  HSPSL+VADFGCGDARLAR VKNKVFS DLVS +PS+I CDMSNTPL+SSSIDV+V
Sbjct: 61  WLKDHSPSLIVADFGCGDARLARNVKNKVFSFDLVSSDPSVIVCDMSNTPLESSSIDVAV 120

Query: 179 FCLSLMGTNFPSYLQEAQRVLKPCGWLLIAEVKSRFDPTTGGADPDRFSKAIRELGFT 6
           FCLSLMGTNF SYLQEA RVLKPCGWLLIAEVKSRFDP+ GGADP+RFSKAI +LGFT
Sbjct: 121 FCLSLMGTNFSSYLQEAHRVLKPCGWLLIAEVKSRFDPSNGGADPNRFSKAICKLGFT 178


>ref|XP_002298548.1| predicted protein [Populus trichocarpa] gi|222845806|gb|EEE83353.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score =  318 bits (814), Expect = 4e-84
 Identities = 151/179 (84%), Positives = 164/179 (91%)
 Frame = -1

Query: 539 MKARLSGGHFRMINEKLYTCSGDEALNYFKEDPSLFSMYHAGYQEQMSHWPEQPVNIIIK 360
           M+ARLSGGHFRMINEKLYTC+GDEAL+YFKEDPSLF MYH GYQEQMSHWPEQPVNIII+
Sbjct: 1   MRARLSGGHFRMINEKLYTCTGDEALDYFKEDPSLFDMYHTGYQEQMSHWPEQPVNIIIQ 60

Query: 359 WLNYHSPSLVVADFGCGDARLARTVKNKVFSIDLVSDNPSIIACDMSNTPLDSSSIDVSV 180
           WL   S SLVVADFGCGDARLA+ VKNKVFS DLVS++PS+IACDMSNTPLD+SSIDV+V
Sbjct: 61  WLKARSSSLVVADFGCGDARLAKNVKNKVFSFDLVSNDPSVIACDMSNTPLDASSIDVAV 120

Query: 179 FCLSLMGTNFPSYLQEAQRVLKPCGWLLIAEVKSRFDPTTGGADPDRFSKAIRELGFTS 3
           FCLSLMGTNFPSYL+EA RVLKP GWLLIAEVKSR DP TGGADP  FSK+I +LGFTS
Sbjct: 121 FCLSLMGTNFPSYLEEAHRVLKPSGWLLIAEVKSRLDPNTGGADPKMFSKSISDLGFTS 179


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