BLASTX nr result

ID: Panax21_contig00002263 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002263
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283513.1| PREDICTED: ribosome production factor 2 homo...   187   8e-46
ref|XP_002321663.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-42
ref|XP_002528588.1| brix domain containing protein, putative [Ri...   175   3e-42
ref|XP_004137872.1| PREDICTED: ribosome production factor 2 homo...   174   5e-42
ref|XP_003542560.1| PREDICTED: ribosome production factor 2 homo...   168   4e-40

>ref|XP_002283513.1| PREDICTED: ribosome production factor 2 homolog [Vitis vinifera]
           gi|297740066|emb|CBI30248.3| unnamed protein product
           [Vitis vinifera]
          Length = 315

 Score =  187 bits (475), Expect = 8e-46
 Identities = 91/116 (78%), Positives = 103/116 (88%)
 Frame = -3

Query: 508 VFFTHCALRLKKSGTIVPRMELVEVGPSMDLVIRRHRLPNEGLRKESMKTAPELKKKKVK 329
           VFFTHCA+RLKKSGTIVPRMELVEVGPSMDLV+RRHRLPN+ +RKE+MKTA E  KKKVK
Sbjct: 197 VFFTHCAMRLKKSGTIVPRMELVEVGPSMDLVVRRHRLPNDSVRKEAMKTAKEQPKKKVK 256

Query: 328 NVSGDIIEGKIGKIYIPDQEVGSVPLPNKSKGLKRERREAKMKGEANTSAEKKPKQ 161
           NVS D+I+GK+GKIY+PDQ+VGSV LP K+KGLKRERREAKMK E N  A KK K+
Sbjct: 257 NVSQDVIQGKVGKIYVPDQQVGSVALPYKAKGLKRERREAKMKHETNDRAPKKQKE 312


>ref|XP_002321663.1| predicted protein [Populus trichocarpa] gi|222868659|gb|EEF05790.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score =  176 bits (445), Expect = 2e-42
 Identities = 82/116 (70%), Positives = 99/116 (85%)
 Frame = -3

Query: 508 VFFTHCALRLKKSGTIVPRMELVEVGPSMDLVIRRHRLPNEGLRKESMKTAPELKKKKVK 329
           VF THCA+RLKKSGTIVPR+ELVE+GPSMD V+RRHRLPNE LRKE+MKTA +   KK+K
Sbjct: 197 VFLTHCAMRLKKSGTIVPRIELVEIGPSMDFVVRRHRLPNESLRKEAMKTAKDKLHKKIK 256

Query: 328 NVSGDIIEGKIGKIYIPDQEVGSVPLPNKSKGLKRERREAKMKGEANTSAEKKPKQ 161
           NVS D ++GK+GKIY+PDQ+VG +PLPNK+KG+KRERREAK+K   N  A KK K+
Sbjct: 257 NVSKDALQGKLGKIYVPDQKVGEMPLPNKAKGVKRERREAKVKNSNNERASKKQKE 312


>ref|XP_002528588.1| brix domain containing protein, putative [Ricinus communis]
           gi|223531984|gb|EEF33796.1| brix domain containing
           protein, putative [Ricinus communis]
          Length = 315

 Score =  175 bits (444), Expect = 3e-42
 Identities = 81/119 (68%), Positives = 101/119 (84%)
 Frame = -3

Query: 508 VFFTHCALRLKKSGTIVPRMELVEVGPSMDLVIRRHRLPNEGLRKESMKTAPELKKKKVK 329
           VF THCA+RLKKSGT++PR+EL+EVGPSMDLV+RRHRLPN+ LRKE+MKTA +  KKK+K
Sbjct: 197 VFLTHCAIRLKKSGTVIPRIELIEVGPSMDLVVRRHRLPNDSLRKEAMKTAKDKLKKKIK 256

Query: 328 NVSGDIIEGKIGKIYIPDQEVGSVPLPNKSKGLKRERREAKMKGEANTSAEKKPKQQDS 152
           NVS D I+GK+G+IYIPDQ++G + LP+KSKG+KRERREAKMK   N  A KK K+  +
Sbjct: 257 NVSADAIQGKLGRIYIPDQKIGEMALPDKSKGVKRERREAKMKNGNNEHASKKQKEDST 315


>ref|XP_004137872.1| PREDICTED: ribosome production factor 2 homolog [Cucumis sativus]
          Length = 322

 Score =  174 bits (442), Expect = 5e-42
 Identities = 89/127 (70%), Positives = 106/127 (83%)
 Frame = -3

Query: 508 VFFTHCALRLKKSGTIVPRMELVEVGPSMDLVIRRHRLPNEGLRKESMKTAPELKKKKVK 329
           VF THCALRLKKSG++VPRMELVEVGPSMD+VIRRHRLP +GLRKE+MKTA +  KKK K
Sbjct: 197 VFLTHCALRLKKSGSVVPRMELVEVGPSMDMVIRRHRLPTDGLRKEAMKTAKDKAKKKEK 256

Query: 328 NVSGDIIEGKIGKIYIPDQEVGSVPLPNKSKGLKRERREAKMKGEANTSAEKKPKQQDS* 149
           NVS DII+GKIG+IYIPDQ+VG + + +KSKG+KRERREAKMK   +  A KKPK +DS 
Sbjct: 257 NVSKDIIQGKIGRIYIPDQKVGDMAIVDKSKGVKRERREAKMKNRDDGPASKKPK-EDSE 315

Query: 148 FIRQQSE 128
             ++ SE
Sbjct: 316 KPKEDSE 322


>ref|XP_003542560.1| PREDICTED: ribosome production factor 2 homolog [Glycine max]
          Length = 314

 Score =  168 bits (426), Expect = 4e-40
 Identities = 82/116 (70%), Positives = 96/116 (82%)
 Frame = -3

Query: 508 VFFTHCALRLKKSGTIVPRMELVEVGPSMDLVIRRHRLPNEGLRKESMKTAPELKKKKVK 329
           VFFTHCALRLKKSGT+VPRMEL EVGPSMD V+RRHR PNE LRKE+MKT+ E  KKK K
Sbjct: 197 VFFTHCALRLKKSGTVVPRMELEEVGPSMDFVVRRHRPPNESLRKEAMKTSREKPKKKEK 256

Query: 328 NVSGDIIEGKIGKIYIPDQEVGSVPLPNKSKGLKRERREAKMKGEANTSAEKKPKQ 161
           NV  D ++GKIG IYIPDQ+VG  PLP K+KG+KRER+EAK K E++ SA K+ K+
Sbjct: 257 NVKRDELQGKIGSIYIPDQKVGETPLPYKAKGVKRERQEAKRKNESDGSASKRKKE 312


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