BLASTX nr result

ID: Panax21_contig00002250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002250
         (857 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520213.1| conserved hypothetical protein [Ricinus comm...   118   2e-24
ref|XP_002311863.1| predicted protein [Populus trichocarpa] gi|1...   102   8e-20
gb|AFK35642.1| unknown [Lotus japonicus]                               98   3e-18
ref|XP_002311792.1| predicted protein [Populus trichocarpa] gi|2...    98   3e-18
ref|XP_003519417.1| PREDICTED: uncharacterized protein LOC100797...    94   4e-17

>ref|XP_002520213.1| conserved hypothetical protein [Ricinus communis]
           gi|223540705|gb|EEF42268.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 334

 Score =  118 bits (295), Expect = 2e-24
 Identities = 56/104 (53%), Positives = 76/104 (73%)
 Frame = +2

Query: 479 IRDDRQRLLNSTGASIMGRIPSARGVDVLPQINSLRNSYSPWTLDRLRQRSPDGVFGTSR 658
           I D RQ +     ASI+GRIPS R  D LP+++S RNSYSPWTLD +R+RSPD + G+SR
Sbjct: 128 IVDTRQHMPAPKEASILGRIPSTRSADDLPRMDSSRNSYSPWTLDHIRRRSPDRIIGSSR 187

Query: 659 VASPPRNEEQSRRRPIIRAYDDVRSAAYLSKDGLELSRPMGTAS 790
             SPPRN E+ +RRP+ R  DD R+ +Y+SKD L+  RP+G+++
Sbjct: 188 ALSPPRNVEEIQRRPLSRTLDDARAVSYMSKDVLDGRRPVGSST 231


>ref|XP_002311863.1| predicted protein [Populus trichocarpa] gi|118487432|gb|ABK95544.1|
           unknown [Populus trichocarpa]
           gi|222851683|gb|EEE89230.1| predicted protein [Populus
           trichocarpa]
          Length = 330

 Score =  102 bits (255), Expect = 8e-20
 Identities = 50/102 (49%), Positives = 68/102 (66%)
 Frame = +2

Query: 485 DDRQRLLNSTGASIMGRIPSARGVDVLPQINSLRNSYSPWTLDRLRQRSPDGVFGTSRVA 664
           D RQR+   T  SI+GRIP  R  D L  + S RNS+S WTLD +R+RSPD V  +SR  
Sbjct: 124 DARQRMPEPTDTSILGRIPPTRSADDLHHMYSSRNSFSSWTLDHIRRRSPDRVISSSRGL 183

Query: 665 SPPRNEEQSRRRPIIRAYDDVRSAAYLSKDGLELSRPMGTAS 790
           SPPRN +  +RRP+ R YDD R+ +Y++KD L+  R + ++S
Sbjct: 184 SPPRNVDNLQRRPLNRTYDDFRTVSYMNKDVLDTPRSVSSSS 225


>gb|AFK35642.1| unknown [Lotus japonicus]
          Length = 338

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 52/109 (47%), Positives = 67/109 (61%)
 Frame = +2

Query: 461 RQRMPEIRDDRQRLLNSTGASIMGRIPSARGVDVLPQINSLRNSYSPWTLDRLRQRSPDG 640
           + RMPE R+           S++ ++P AR  D L ++ S+R+SYSPWTLD +RQRSPDG
Sbjct: 130 KPRMPEPRE----------RSLLRQLPPARSSDDLMRMESMRSSYSPWTLDHIRQRSPDG 179

Query: 641 VFGTSRVASPPRNEEQSRRRPIIRAYDDVRSAAYLSKDGLELSRPMGTA 787
              TSR  SP RN    +RRP+ R YD  RS  Y+ +D LE SRP  TA
Sbjct: 180 FPSTSRGISPQRNAGDLQRRPLNRTYDSARSVPYVGRDVLETSRPPSTA 228


>ref|XP_002311792.1| predicted protein [Populus trichocarpa] gi|222851612|gb|EEE89159.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 48/102 (47%), Positives = 67/102 (65%)
 Frame = +2

Query: 485 DDRQRLLNSTGASIMGRIPSARGVDVLPQINSLRNSYSPWTLDRLRQRSPDGVFGTSRVA 664
           D R  L +    SI+GRIP  R  DVL  ++S RNS+SPWTLD +R+RSPD V  +S   
Sbjct: 133 DARHCLPDPKDTSILGRIPPTRSADVLHHMDSSRNSFSPWTLDHIRRRSPDRVMSSSGGL 192

Query: 665 SPPRNEEQSRRRPIIRAYDDVRSAAYLSKDGLELSRPMGTAS 790
           SPPRN +  +RRP+ R YD VR+  Y++KD L+  R + +++
Sbjct: 193 SPPRNMDNLQRRPLNRTYDAVRTVPYMNKDVLDTPRSVSSST 234


>ref|XP_003519417.1| PREDICTED: uncharacterized protein LOC100797199 [Glycine max]
          Length = 337

 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 47/97 (48%), Positives = 64/97 (65%)
 Frame = +2

Query: 485 DDRQRLLNSTGASIMGRIPSARGVDVLPQINSLRNSYSPWTLDRLRQRSPDGVFGTSRVA 664
           + +Q    S   S++ +IPSAR  D L ++ S+R+SYSPWTLD +R+RSPDG   TSR  
Sbjct: 123 NSKQHGPESRETSLLRQIPSARSSDDLLRMKSMRSSYSPWTLDHIRRRSPDGFPSTSRGI 182

Query: 665 SPPRNEEQSRRRPIIRAYDDVRSAAYLSKDGLELSRP 775
           SP R+ +   RRP+ R YD V S +Y+ +D LE SRP
Sbjct: 183 SPQRDVQDLHRRPVSRTYDGVSSVSYVGRDVLETSRP 219


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