BLASTX nr result

ID: Panax21_contig00002247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002247
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21054.3| unnamed protein product [Vitis vinifera]               93   3e-17
gb|AFK48583.1| unknown [Lotus japonicus]                               91   1e-16
gb|AFK47791.1| unknown [Lotus japonicus]                               91   1e-16
ref|NP_197916.1| ubiquitin-like domain-containing protein-like p...    89   3e-16
ref|XP_002872158.1| predicted protein [Arabidopsis lyrata subsp....    89   3e-16

>emb|CBI21054.3| unnamed protein product [Vitis vinifera]
          Length = 251

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/84 (52%), Positives = 59/84 (70%), Gaps = 6/84 (7%)
 Frame = -2

Query: 310 YWEVQ------SVIMVCAECNYWELVVKTAMVAELKKSVEAAFSHLPKEGPDKVSWSHVW 149
           YW++       SV+ +   C   E V KT+ VAELK++VE AFSHLPK+GP K+SW HVW
Sbjct: 37  YWKLPQQPIKLSVLKLDGSCFQIE-VTKTSTVAELKQAVEDAFSHLPKKGPGKISWLHVW 95

Query: 148 GHFCLCYDGQNLIKDSDYIGDYDI 77
           GHFCLCY+ Q L+ +++YI +Y I
Sbjct: 96  GHFCLCYNDQKLVTETEYIKNYGI 119


>gb|AFK48583.1| unknown [Lotus japonicus]
          Length = 220

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 37/59 (62%), Positives = 47/59 (79%)
 Frame = -2

Query: 253 VVKTAMVAELKKSVEAAFSHLPKEGPDKVSWSHVWGHFCLCYDGQNLIKDSDYIGDYDI 77
           V KTA +AELK +VEA FSH+P++GP K+SW HVWG FCLCYDGQ L+ + DY+ +Y I
Sbjct: 64  VSKTASIAELKDAVEAVFSHMPEKGPAKISWPHVWGQFCLCYDGQKLVTEEDYLRNYGI 122


>gb|AFK47791.1| unknown [Lotus japonicus]
          Length = 269

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 37/59 (62%), Positives = 47/59 (79%)
 Frame = -2

Query: 253 VVKTAMVAELKKSVEAAFSHLPKEGPDKVSWSHVWGHFCLCYDGQNLIKDSDYIGDYDI 77
           V KTA +AELK +VEA FSH+P++GP K+SW HVWG FCLCYDGQ L+ + DY+ +Y I
Sbjct: 64  VSKTASIAELKDAVEAVFSHMPEKGPAKISWPHVWGQFCLCYDGQKLVTEEDYLRNYGI 122


>ref|NP_197916.1| ubiquitin-like domain-containing protein-like protein [Arabidopsis
           thaliana] gi|26451503|dbj|BAC42849.1| unknown protein
           [Arabidopsis thaliana] gi|28973251|gb|AAO63950.1|
           unknown protein [Arabidopsis thaliana]
           gi|332006045|gb|AED93428.1| ubiquitin-like
           domain-containing protein-like protein [Arabidopsis
           thaliana]
          Length = 208

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 36/57 (63%), Positives = 47/57 (82%)
 Frame = -2

Query: 253 VVKTAMVAELKKSVEAAFSHLPKEGPDKVSWSHVWGHFCLCYDGQNLIKDSDYIGDY 83
           V+ +A V +LK ++E AFSH+PK+GP K+SWSHVWGHFCLC+ GQ LI D+D IG+Y
Sbjct: 35  VLTSATVGDLKVAIETAFSHVPKKGPSKISWSHVWGHFCLCFGGQKLITDTDCIGNY 91


>ref|XP_002872158.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317995|gb|EFH48417.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 208

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 36/59 (61%), Positives = 47/59 (79%)
 Frame = -2

Query: 253 VVKTAMVAELKKSVEAAFSHLPKEGPDKVSWSHVWGHFCLCYDGQNLIKDSDYIGDYDI 77
           V+ +A V +LK ++E AFSH+PK+GP K+SWSHVWGHFCLC+ GQ LI D+D IG Y +
Sbjct: 35  VLTSATVGDLKVAIETAFSHVPKKGPSKISWSHVWGHFCLCFGGQKLITDTDCIGSYGL 93


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