BLASTX nr result

ID: Panax21_contig00002246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002246
         (1946 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267641.1| PREDICTED: 2,3-dimethylmalate lyase [Vitis v...   531   e-148
emb|CBI39149.3| unnamed protein product [Vitis vinifera]              522   e-145
ref|XP_002301634.1| predicted protein [Populus trichocarpa] gi|2...   513   e-143
ref|XP_003532329.1| PREDICTED: 2,3-dimethylmalate lyase-like [Gl...   497   e-138
ref|XP_003621025.1| Isocitrate lyase [Medicago truncatula] gi|35...   497   e-138

>ref|XP_002267641.1| PREDICTED: 2,3-dimethylmalate lyase [Vitis vinifera]
          Length = 505

 Score =  531 bits (1367), Expect = e-148
 Identities = 271/343 (79%), Positives = 301/343 (87%), Gaps = 4/343 (1%)
 Frame = -3

Query: 1677 GSPLQRLVL----SRSYTSLKLPYDNTSIIACYGDRNSPAIESPAKALRRILDSPGVHQG 1510
            GSPLQRL+L    S S+ S   P     + A YGD+ +P  E+PAK LRRILDSPGVHQG
Sbjct: 45   GSPLQRLLLLPKMSTSFHSSTEPRPIPPLSAAYGDQ-APLPEAPAKVLRRILDSPGVHQG 103

Query: 1509 PACFDALSAKLVERAGFELCFTSGFSISASRLGLPDTGFISYGEMVDQGLQITQAVSIPV 1330
            PACFDALSA+LVERAGF+ CFTSGFSISA+RLGLPD G ISYGEM+DQG QITQAVSIPV
Sbjct: 104  PACFDALSAQLVERAGFQYCFTSGFSISAARLGLPDVGLISYGEMLDQGRQITQAVSIPV 163

Query: 1329 IGDGDNGYGNAMNVKRTVKGYIKAGFAGILLEDQVSPKACGHTRGRKVVSSAEAVMRIKA 1150
            IGDGDNGYGNAMNVKRTVK +I+AGFAGI+LEDQVSPKACGHTRGRKVVS  EAVMRIKA
Sbjct: 164  IGDGDNGYGNAMNVKRTVKDFIRAGFAGIILEDQVSPKACGHTRGRKVVSREEAVMRIKA 223

Query: 1149 AVDARKESGSDIVIVARTDSRQAISLEESLWRSKAFADAGADVLFTDALASKEEMKTFCE 970
            A+DARKE+GSDIVIVARTDSRQA+S +ESLWRS+AFA AGADVLF DAL+S+EEMK FCE
Sbjct: 224  AIDARKETGSDIVIVARTDSRQAVSFDESLWRSRAFASAGADVLFIDALSSREEMKAFCE 283

Query: 969  ISPLVPKMANMLEGGGKTPILNPMELEDVGFKLVAYPLSLMGVSIRAIQDALAAIKGGRI 790
            I+P VPKMANMLEGGGKTPILNP+ELEDVG+K+V YPLSL+GVSIRA+QDAL AIKGGRI
Sbjct: 284  IAPFVPKMANMLEGGGKTPILNPIELEDVGYKIVVYPLSLIGVSIRAMQDALRAIKGGRI 343

Query: 789  PPPGSMPSFEELQEILGFNSYYEEEKRYATSDSQLSSQRGE*N 661
            P PGSMP+FEE++E LGFNSYYEEEKRYATS  Q+S QR   N
Sbjct: 344  PSPGSMPTFEEIKETLGFNSYYEEEKRYATSKGQVSWQRASSN 386


>emb|CBI39149.3| unnamed protein product [Vitis vinifera]
          Length = 449

 Score =  522 bits (1344), Expect = e-145
 Identities = 263/331 (79%), Positives = 293/331 (88%)
 Frame = -3

Query: 1653 LSRSYTSLKLPYDNTSIIACYGDRNSPAIESPAKALRRILDSPGVHQGPACFDALSAKLV 1474
            +S S+ S   P     + A YGD+ +P  E+PAK LRRILDSPGVHQGPACFDALSA+LV
Sbjct: 1    MSTSFHSSTEPRPIPPLSAAYGDQ-APLPEAPAKVLRRILDSPGVHQGPACFDALSAQLV 59

Query: 1473 ERAGFELCFTSGFSISASRLGLPDTGFISYGEMVDQGLQITQAVSIPVIGDGDNGYGNAM 1294
            ERAGF+ CFTSGFSISA+RLGLPD G ISYGEM+DQG QITQAVSIPVIGDGDNGYGNAM
Sbjct: 60   ERAGFQYCFTSGFSISAARLGLPDVGLISYGEMLDQGRQITQAVSIPVIGDGDNGYGNAM 119

Query: 1293 NVKRTVKGYIKAGFAGILLEDQVSPKACGHTRGRKVVSSAEAVMRIKAAVDARKESGSDI 1114
            NVKRTVK +I+AGFAGI+LEDQVSPKACGHTRGRKVVS  EAVMRIKAA+DARKE+GSDI
Sbjct: 120  NVKRTVKDFIRAGFAGIILEDQVSPKACGHTRGRKVVSREEAVMRIKAAIDARKETGSDI 179

Query: 1113 VIVARTDSRQAISLEESLWRSKAFADAGADVLFTDALASKEEMKTFCEISPLVPKMANML 934
            VIVARTDSRQA+S +ESLWRS+AFA AGADVLF DAL+S+EEMK FCEI+P VPKMANML
Sbjct: 180  VIVARTDSRQAVSFDESLWRSRAFASAGADVLFIDALSSREEMKAFCEIAPFVPKMANML 239

Query: 933  EGGGKTPILNPMELEDVGFKLVAYPLSLMGVSIRAIQDALAAIKGGRIPPPGSMPSFEEL 754
            EGGGKTPILNP+ELEDVG+K+V YPLSL+GVSIRA+QDAL AIKGGRIP PGSMP+FEE+
Sbjct: 240  EGGGKTPILNPIELEDVGYKIVVYPLSLIGVSIRAMQDALRAIKGGRIPSPGSMPTFEEI 299

Query: 753  QEILGFNSYYEEEKRYATSDSQLSSQRGE*N 661
            +E LGFNSYYEEEKRYATS  Q+S QR   N
Sbjct: 300  KETLGFNSYYEEEKRYATSKGQVSWQRASSN 330


>ref|XP_002301634.1| predicted protein [Populus trichocarpa] gi|222843360|gb|EEE80907.1|
            predicted protein [Populus trichocarpa]
          Length = 504

 Score =  513 bits (1322), Expect = e-143
 Identities = 254/302 (84%), Positives = 283/302 (93%)
 Frame = -3

Query: 1563 SPAKALRRILDSPGVHQGPACFDALSAKLVERAGFELCFTSGFSISASRLGLPDTGFISY 1384
            S AK LR ILDSPGVHQGPACFDALSA LV+RAGF+ CFTSGFSISA++LGLPDTGFISY
Sbjct: 83   SAAKKLRLILDSPGVHQGPACFDALSALLVQRAGFDYCFTSGFSISAAKLGLPDTGFISY 142

Query: 1383 GEMVDQGLQITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGILLEDQVSPKACGH 1204
            GEMVDQG QITQAVSIPVIGD DNGYGN MNVKRTVKGYI+AGFAGI+LEDQVSPKACGH
Sbjct: 143  GEMVDQGQQITQAVSIPVIGDADNGYGNPMNVKRTVKGYIRAGFAGIILEDQVSPKACGH 202

Query: 1203 TRGRKVVSSAEAVMRIKAAVDARKESGSDIVIVARTDSRQAISLEESLWRSKAFADAGAD 1024
            TRGRKVVS  EA+MRIKAAVDAR+E+GSDIVIV+RTDSRQA+SL+ESLWRS+AFADAGAD
Sbjct: 203  TRGRKVVSREEAIMRIKAAVDAREETGSDIVIVSRTDSRQAVSLDESLWRSRAFADAGAD 262

Query: 1023 VLFTDALASKEEMKTFCEISPLVPKMANMLEGGGKTPILNPMELEDVGFKLVAYPLSLMG 844
            VLF DALAS+EEMK+FCEISPLVPKMANMLEGGGKTPI+ P ELE+VG+KLVAYPLSL+G
Sbjct: 263  VLFIDALASREEMKSFCEISPLVPKMANMLEGGGKTPIVTPFELEEVGYKLVAYPLSLIG 322

Query: 843  VSIRAIQDALAAIKGGRIPPPGSMPSFEELQEILGFNSYYEEEKRYATSDSQLSSQRGE* 664
            VSIRA+QD+LAAIKGGRIPPPGSMPSFEE+++ILGFN+YYEEEK+YA S SQ++ QR   
Sbjct: 323  VSIRAMQDSLAAIKGGRIPPPGSMPSFEEIKDILGFNTYYEEEKQYAISSSQMARQRASS 382

Query: 663  NL 658
            N+
Sbjct: 383  NV 384


>ref|XP_003532329.1| PREDICTED: 2,3-dimethylmalate lyase-like [Glycine max]
          Length = 466

 Score =  497 bits (1280), Expect = e-138
 Identities = 248/312 (79%), Positives = 282/312 (90%)
 Frame = -3

Query: 1593 YGDRNSPAIESPAKALRRILDSPGVHQGPACFDALSAKLVERAGFELCFTSGFSISASRL 1414
            +G   S A  SPAKALRRILDSPGVHQGPACFDALSAKLVE AGF+ CF+SGFSISA+ L
Sbjct: 34   FGVACSLASSSPAKALRRILDSPGVHQGPACFDALSAKLVENAGFQFCFSSGFSISAASL 93

Query: 1413 GLPDTGFISYGEMVDQGLQITQAVSIPVIGDGDNGYGNAMNVKRTVKGYIKAGFAGILLE 1234
             LPDTG ISY EM+ QG  ITQ+VSIPVIGD DNGYGNAMN+KRT+KGYI AGFAGI+LE
Sbjct: 94   ALPDTGLISYAEMLHQGQLITQSVSIPVIGDADNGYGNAMNLKRTLKGYIAAGFAGIILE 153

Query: 1233 DQVSPKACGHTRGRKVVSSAEAVMRIKAAVDARKESGSDIVIVARTDSRQAISLEESLWR 1054
            DQVSPKACGHTRGR+VVS  EAVM+IKAAVDAR+ESGSDIVIVAR+D+RQA+SLEE+L R
Sbjct: 154  DQVSPKACGHTRGRRVVSREEAVMKIKAAVDARRESGSDIVIVARSDARQAVSLEEALVR 213

Query: 1053 SKAFADAGADVLFTDALASKEEMKTFCEISPLVPKMANMLEGGGKTPILNPMELEDVGFK 874
            S+AFADAGADVLF DALAS+EEMK FC++SPLVPKMANMLEGGGKTPILNPMEL+D+GFK
Sbjct: 214  SRAFADAGADVLFIDALASREEMKAFCDVSPLVPKMANMLEGGGKTPILNPMELQDIGFK 273

Query: 873  LVAYPLSLMGVSIRAIQDALAAIKGGRIPPPGSMPSFEELQEILGFNSYYEEEKRYATSD 694
            +VAYPLSL+GVSIRA+QD+L AI+GGRIPPPGSMPSFEE+++ILGFN+YYEEEKRYAT+ 
Sbjct: 274  IVAYPLSLIGVSIRAMQDSLTAIRGGRIPPPGSMPSFEEIKDILGFNAYYEEEKRYATTT 333

Query: 693  SQLSSQRGE*NL 658
            +   S+R   NL
Sbjct: 334  NPQLSKRESSNL 345


>ref|XP_003621025.1| Isocitrate lyase [Medicago truncatula] gi|355496040|gb|AES77243.1|
            Isocitrate lyase [Medicago truncatula]
          Length = 467

 Score =  497 bits (1279), Expect = e-138
 Identities = 252/337 (74%), Positives = 290/337 (86%)
 Frame = -3

Query: 1683 NFGSPLQRLVLSRSYTSLKLPYDNTSIIACYGDRNSPAIESPAKALRRILDSPGVHQGPA 1504
            +F SP Q     +S+ + K P   T  I+C  ++        AK LR ILDSPGVHQGPA
Sbjct: 31   SFSSPFQL----QSHRNSK-PLRATITISCSSNK--------AKQLREILDSPGVHQGPA 77

Query: 1503 CFDALSAKLVERAGFELCFTSGFSISASRLGLPDTGFISYGEMVDQGLQITQAVSIPVIG 1324
            CFDALSA LV+ AGF LCFTSGFSISASRLGLPDTG++SYGE+ DQGL ITQ+V IPVIG
Sbjct: 78   CFDALSANLVQSAGFPLCFTSGFSISASRLGLPDTGYLSYGEIFDQGLLITQSVDIPVIG 137

Query: 1323 DGDNGYGNAMNVKRTVKGYIKAGFAGILLEDQVSPKACGHTRGRKVVSSAEAVMRIKAAV 1144
            D DNGYGNAMNVKRTVKGY+ AGFAGI+LEDQVSPKACGHT+GRKVVS  EAVMRIKAAV
Sbjct: 138  DADNGYGNAMNVKRTVKGYVNAGFAGIILEDQVSPKACGHTQGRKVVSREEAVMRIKAAV 197

Query: 1143 DARKESGSDIVIVARTDSRQAISLEESLWRSKAFADAGADVLFTDALASKEEMKTFCEIS 964
            DAR ESGSDIVIVARTD+RQA+SL+E+L+RS+AFADAGADV+F DALAS++EM+ FC++S
Sbjct: 198  DARNESGSDIVIVARTDARQALSLDEALYRSRAFADAGADVVFIDALASRQEMEAFCQVS 257

Query: 963  PLVPKMANMLEGGGKTPILNPMELEDVGFKLVAYPLSLMGVSIRAIQDALAAIKGGRIPP 784
            PLVPKMANMLEGGGKTPIL P+ELED+G+K+VAYPLSL+GVSIRA+QDAL AIKGGRIPP
Sbjct: 258  PLVPKMANMLEGGGKTPILTPLELEDIGYKIVAYPLSLIGVSIRAMQDALTAIKGGRIPP 317

Query: 783  PGSMPSFEELQEILGFNSYYEEEKRYATSDSQLSSQR 673
            PGSMP+FEE+++ LGFN+YYEEEKRYATS  QL  QR
Sbjct: 318  PGSMPTFEEIKDTLGFNAYYEEEKRYATSTDQLIQQR 354


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