BLASTX nr result

ID: Panax21_contig00002227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002227
         (949 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617941.1| 40S ribosomal protein [Medicago truncatula] ...   145   1e-32
ref|XP_003524666.1| PREDICTED: 40S ribosomal protein S26-1-like ...   142   2e-31
gb|ACU18961.1| unknown [Glycine max]                                  142   2e-31
ref|NP_001237066.1| uncharacterized protein LOC100499862 [Glycin...   142   2e-31
ref|NP_001239976.1| uncharacterized protein LOC100784958 [Glycin...   142   2e-31

>ref|XP_003617941.1| 40S ribosomal protein [Medicago truncatula]
           gi|355519276|gb|AET00900.1| 40S ribosomal protein
           [Medicago truncatula]
          Length = 230

 Score =  145 bits (366), Expect = 1e-32
 Identities = 73/123 (59%), Positives = 81/123 (65%)
 Frame = +3

Query: 6   RERETERAVSKEKTTKMTFXXXXXXXXXXXXXXVKFIRCSNCGKCCPKDKSIKRFLVRNI 185
           RER  + A     +T MTF              VKFIRCSNCGKCCPKDK+IKRFLVRNI
Sbjct: 85  RERAKKTAKPWRASTTMTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNI 144

Query: 186 VEQAAVRDVQEACAFEAYTLPKLYVKMQYCVSCAIHSKXXXXXXXXXXXXXEPPKRFTRP 365
           VEQAAVRDVQEAC ++ YTLPKLYVKMQYCVSCAIHS              +PP+RF R 
Sbjct: 145 VEQAAVRDVQEACVYDQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRFIRR 204

Query: 366 KAD 374
           + D
Sbjct: 205 RDD 207


>ref|XP_003524666.1| PREDICTED: 40S ribosomal protein S26-1-like [Glycine max]
          Length = 129

 Score =  142 bits (357), Expect = 2e-31
 Identities = 70/107 (65%), Positives = 74/107 (69%)
 Frame = +3

Query: 54  MTFXXXXXXXXXXXXXXVKFIRCSNCGKCCPKDKSIKRFLVRNIVEQAAVRDVQEACAFE 233
           MTF              VKFIRCSNCGKCCPKDK+IKRFLVRNIVEQAAVRDVQEAC +E
Sbjct: 1   MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYE 60

Query: 234 AYTLPKLYVKMQYCVSCAIHSKXXXXXXXXXXXXXEPPKRFTRPKAD 374
            YTLPKLYVKMQYCVSCAIHS              EPP+RF R + D
Sbjct: 61  QYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKREPPQRFIRRRDD 107


>gb|ACU18961.1| unknown [Glycine max]
          Length = 129

 Score =  142 bits (357), Expect = 2e-31
 Identities = 70/107 (65%), Positives = 74/107 (69%)
 Frame = +3

Query: 54  MTFXXXXXXXXXXXXXXVKFIRCSNCGKCCPKDKSIKRFLVRNIVEQAAVRDVQEACAFE 233
           MTF              VKFIRCSNCGKCCPKDK+IKRFLVRNIVEQAAVRDVQEAC +E
Sbjct: 1   MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYE 60

Query: 234 AYTLPKLYVKMQYCVSCAIHSKXXXXXXXXXXXXXEPPKRFTRPKAD 374
            YTLPKLYVKMQYCVSCAIHS              EPP+RF R + D
Sbjct: 61  QYTLPKLYVKMQYCVSCAIHSHVVRVRSCTDRRKREPPQRFIRRRDD 107


>ref|NP_001237066.1| uncharacterized protein LOC100499862 [Glycine max]
           gi|255627229|gb|ACU13959.1| unknown [Glycine max]
          Length = 130

 Score =  142 bits (357), Expect = 2e-31
 Identities = 70/107 (65%), Positives = 74/107 (69%)
 Frame = +3

Query: 54  MTFXXXXXXXXXXXXXXVKFIRCSNCGKCCPKDKSIKRFLVRNIVEQAAVRDVQEACAFE 233
           MTF              VKFIRCSNCGKCCPKDK+IKRFLVRNIVEQAAVRDVQEAC +E
Sbjct: 1   MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYE 60

Query: 234 AYTLPKLYVKMQYCVSCAIHSKXXXXXXXXXXXXXEPPKRFTRPKAD 374
            YTLPKLYVKMQYCVSCAIHS              EPP+RF R + D
Sbjct: 61  QYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKREPPQRFIRRRDD 107


>ref|NP_001239976.1| uncharacterized protein LOC100784958 [Glycine max]
           gi|255627385|gb|ACU14037.1| unknown [Glycine max]
           gi|255642187|gb|ACU21358.1| unknown [Glycine max]
          Length = 129

 Score =  142 bits (357), Expect = 2e-31
 Identities = 70/107 (65%), Positives = 74/107 (69%)
 Frame = +3

Query: 54  MTFXXXXXXXXXXXXXXVKFIRCSNCGKCCPKDKSIKRFLVRNIVEQAAVRDVQEACAFE 233
           MTF              VKFIRCSNCGKCCPKDK+IKRFLVRNIVEQAAVRDVQEAC +E
Sbjct: 1   MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYE 60

Query: 234 AYTLPKLYVKMQYCVSCAIHSKXXXXXXXXXXXXXEPPKRFTRPKAD 374
            YTLPKLYVKMQYCVSCAIHS              EPP+RF R + D
Sbjct: 61  QYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKREPPQRFIRRRDD 107


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