BLASTX nr result

ID: Panax21_contig00002215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002215
         (1203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282485.1| PREDICTED: uncharacterized protein LOC100267...   212   2e-74
ref|XP_003611747.1| Splicing factor, arginine/serine-rich [Medic...   209   5e-73
ref|XP_004149706.1| PREDICTED: uncharacterized protein LOC101213...   207   6e-73
ref|XP_003517297.1| PREDICTED: uncharacterized protein LOC100792...   204   3e-71
ref|XP_003611746.1| Splicing factor, arginine/serine-rich [Medic...   200   2e-70

>ref|XP_002282485.1| PREDICTED: uncharacterized protein LOC100267903 [Vitis vinifera]
           gi|296082422|emb|CBI21427.3| unnamed protein product
           [Vitis vinifera]
          Length = 552

 Score =  212 bits (539), Expect(2) = 2e-74
 Identities = 126/248 (50%), Positives = 139/248 (56%), Gaps = 2/248 (0%)
 Frame = +1

Query: 247 DEEGLQHVNQEMEAKHVALFGLDRSHPAQPPPAASKGAYSQVGFSYDGDGKQETYYXXXX 426
           DEEGLQHVN+EMEAK VA F  DRS   QPP  ASKG+YSQVGFSYDGDGK+ET++    
Sbjct: 131 DEEGLQHVNEEMEAKTVAPFTSDRSQLPQPP--ASKGSYSQVGFSYDGDGKEETHFSDGD 188

Query: 427 XXXXXXXXXXXXXXXXXXXXXXXXGMDLIAKEFGVKRYGWLVYMDXXXXXXXXXXXXXXX 606
                                   GMD IAKEFGVKRYGWLVYMD               
Sbjct: 189 NDDDDEDDEDDEDFNSDDSNDE--GMDTIAKEFGVKRYGWLVYMDKKAKEEEKRQKEVIK 246

Query: 607 GDPAIRKLSRKERRKASQIXXXXXXXXXXXXXXXVLHHDPYRESRRSPTYEA--XXXXXX 780
           GDPAIRKLSRKERRKASQI               +L HDPYRE RRSPTY+A        
Sbjct: 247 GDPAIRKLSRKERRKASQIEREREREATRVTGTRMLQHDPYREPRRSPTYDAYPRSRRSR 306

Query: 781 XXXXXXXXXXXXXHGRGVHADDVPRSKSKAPKIEYITEFGGAGEGDEPKIAGYXXXXXXX 960
                        + RG H DDV RSKSK PKIEYITEFGG+ +GD+PK  G+       
Sbjct: 307 SRSRSYSPSYSRRYARGGH-DDVHRSKSKTPKIEYITEFGGSADGDDPKFEGFSPPPSPP 365

Query: 961 XEAGSLNR 984
             A +LNR
Sbjct: 366 SHADALNR 373



 Score = 95.1 bits (235), Expect(2) = 2e-74
 Identities = 48/74 (64%), Positives = 49/74 (66%)
 Frame = +3

Query: 3   YRDDGLYQATQDQQGLIPWNGKQDILIDRFDGRALLXXXXXXXXXXXXVQXXXXXXXXXX 182
           YRDDGLYQAT DQQGLIPWNGKQ+ILIDRFDGRALL             Q          
Sbjct: 51  YRDDGLYQATLDQQGLIPWNGKQNILIDRFDGRALLDFIRDSDSRHFRAQQKTEEEEELE 110

Query: 183 XFVNFERYRDLIKH 224
            FVNFERYRDLIKH
Sbjct: 111 EFVNFERYRDLIKH 124


>ref|XP_003611747.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
            gi|355513082|gb|AES94705.1| Splicing factor,
            arginine/serine-rich [Medicago truncatula]
          Length = 382

 Score =  209 bits (531), Expect(2) = 5e-73
 Identities = 121/259 (46%), Positives = 144/259 (55%), Gaps = 2/259 (0%)
 Frame = +1

Query: 247  DEEGLQHVNQEMEAKHVALFGLDRSHPAQPPPAASKGAYSQVGFSYDGDGKQETYYXXXX 426
            DE+ LQHVN EMEAK  A F  DRS+ +QP  AA+KG+YSQVGFSYDG+GK+E+      
Sbjct: 129  DEDALQHVNLEMEAKAAAPFASDRSNVSQP--AATKGSYSQVGFSYDGNGKEESQISDDD 186

Query: 427  XXXXXXXXXXXXXXXXXXXXXXXXGMDLIAKEFGVKRYGWLVYMDXXXXXXXXXXXXXXX 606
                                    GM++IAKE+GVKRYGWLVYMD               
Sbjct: 187  DEEDEDDEDDEDFNSDDSNDE---GMEIIAKEYGVKRYGWLVYMDKKAKEEQKRQKEIIK 243

Query: 607  GDPAIRKLSRKERRKASQIXXXXXXXXXXXXXXXVLHHDPYRESRRSPTYEA--XXXXXX 780
            GDPAIRKLSRKERRKASQ+               VLHHDPYRESR+SPTYEA        
Sbjct: 244  GDPAIRKLSRKERRKASQVEREREREATRIPGTRVLHHDPYRESRQSPTYEAYSRSRRSR 303

Query: 781  XXXXXXXXXXXXXHGRGVHADDVPRSKSKAPKIEYITEFGGAGEGDEPKIAGYXXXXXXX 960
                         + R  H DD+ R+KSK PKIEYITEFGG+GE D  +  G+       
Sbjct: 304  SRSRSYSPSYARRYSRSSHFDDILRNKSKTPKIEYITEFGGSGEADGTRREGFSPPRSPT 363

Query: 961  XEAGSLNRSENLTFHSCKD 1017
                +LNRSE+ TF+ C+D
Sbjct: 364  SRVDTLNRSEHWTFNYCQD 382



 Score = 93.6 bits (231), Expect(2) = 5e-73
 Identities = 49/74 (66%), Positives = 50/74 (67%)
 Frame = +3

Query: 3   YRDDGLYQATQDQQGLIPWNGKQDILIDRFDGRALLXXXXXXXXXXXXVQXXXXXXXXXX 182
           YRDD LYQAT+DQQGLIPWNGKQDILIDRFDGRALL            VQ          
Sbjct: 51  YRDDALYQATEDQQGLIPWNGKQDILIDRFDGRALL--DFIRDSSFRRVQEKSEEEEELE 108

Query: 183 XFVNFERYRDLIKH 224
            FVNFERYRDLIKH
Sbjct: 109 EFVNFERYRDLIKH 122


>ref|XP_004149706.1| PREDICTED: uncharacterized protein LOC101213620 [Cucumis sativus]
          Length = 557

 Score =  207 bits (528), Expect(2) = 6e-73
 Identities = 119/246 (48%), Positives = 135/246 (54%)
 Frame = +1

Query: 247 DEEGLQHVNQEMEAKHVALFGLDRSHPAQPPPAASKGAYSQVGFSYDGDGKQETYYXXXX 426
           DE+GLQHVNQEMEAK  A F  DRS   QPP +ASKG+YSQVGFSY+ DGK+E+      
Sbjct: 131 DEDGLQHVNQEMEAKMSAPFVSDRSQQPQPP-SASKGSYSQVGFSYEADGKEESNSDADD 189

Query: 427 XXXXXXXXXXXXXXXXXXXXXXXXGMDLIAKEFGVKRYGWLVYMDXXXXXXXXXXXXXXX 606
                                   GM++IAKEFGVKRYGWLVYMD               
Sbjct: 190 NASDDEDDEDDEYEDFHSDDSNDEGMEVIAKEFGVKRYGWLVYMDKKAKEEEKRQKEIIK 249

Query: 607 GDPAIRKLSRKERRKASQIXXXXXXXXXXXXXXXVLHHDPYRESRRSPTYEAXXXXXXXX 786
           GDPAIRKLSRKERRKASQ+               VLHHDPYRESRRSPTY+A        
Sbjct: 250 GDPAIRKLSRKERRKASQMEREREREAARITGTRVLHHDPYRESRRSPTYDAYPRSRRSR 309

Query: 787 XXXXXXXXXXXHGRGVHADDVPRSKSKAPKIEYITEFGGAGEGDEPKIAGYXXXXXXXXE 966
                      H  G H DDV RSK K PKIE+ITEFGG+GE  EP++ G         +
Sbjct: 310 SRSHSPSHSRHHSHG-HFDDVHRSKPKTPKIEFITEFGGSGESKEPRLEGLSPPQSPPSQ 368

Query: 967 AGSLNR 984
              +NR
Sbjct: 369 PDMINR 374



 Score = 94.4 bits (233), Expect(2) = 6e-73
 Identities = 45/74 (60%), Positives = 49/74 (66%)
 Frame = +3

Query: 3   YRDDGLYQATQDQQGLIPWNGKQDILIDRFDGRALLXXXXXXXXXXXXVQXXXXXXXXXX 182
           YRDDGLYQAT+DQQGLIPWNGKQD++IDRFDGRALL                        
Sbjct: 51  YRDDGLYQATEDQQGLIPWNGKQDVMIDRFDGRALLDFIREPGSRHIRTHEKSEEEEELE 110

Query: 183 XFVNFERYRDLIKH 224
            FVNF+RYRDLIKH
Sbjct: 111 EFVNFQRYRDLIKH 124


>ref|XP_003517297.1| PREDICTED: uncharacterized protein LOC100792600 [Glycine max]
          Length = 544

 Score =  204 bits (520), Expect(2) = 3e-71
 Identities = 118/248 (47%), Positives = 137/248 (55%), Gaps = 2/248 (0%)
 Frame = +1

Query: 247 DEEGLQHVNQEMEAKHVALFGLDRSHPAQPPPAASKGAYSQVGFSYDGDGKQETYYXXXX 426
           DEE LQHVNQEMEAK  A F  DRS+ +QP  AASKG+YSQVGFSYDG+GK+ET+     
Sbjct: 129 DEEALQHVNQEMEAKAAAPFTSDRSNLSQP--AASKGSYSQVGFSYDGNGKEETHISDDD 186

Query: 427 XXXXXXXXXXXXXXXXXXXXXXXXGMDLIAKEFGVKRYGWLVYMDXXXXXXXXXXXXXXX 606
                                   GM++IAKE+GVKRYGWLVYMD               
Sbjct: 187 DNDNEEEEDDEDDEDFNSDDSNDEGMEIIAKEYGVKRYGWLVYMDKKAKEEEKRQKELIK 246

Query: 607 GDPAIRKLSRKERRKASQIXXXXXXXXXXXXXXXVLHHDPYRESRRSPTYEA--XXXXXX 780
           GDPAIRKLSRKERRKASQI               VLHHDPYRE+R+SPTYEA        
Sbjct: 247 GDPAIRKLSRKERRKASQIEREREREATRISGTRVLHHDPYRETRQSPTYEAYSRSRRSR 306

Query: 781 XXXXXXXXXXXXXHGRGVHADDVPRSKSKAPKIEYITEFGGAGEGDEPKIAGYXXXXXXX 960
                        + R  H+DD+ RSK + PKIEYITEFGG+G  DE +  G+       
Sbjct: 307 SPLRSYSPSHSRRYSRSGHSDDIHRSKPRTPKIEYITEFGGSGAADERRPEGFSPPRSPT 366

Query: 961 XEAGSLNR 984
            +   LNR
Sbjct: 367 SQVDLLNR 374



 Score = 92.0 bits (227), Expect(2) = 3e-71
 Identities = 48/74 (64%), Positives = 49/74 (66%)
 Frame = +3

Query: 3   YRDDGLYQATQDQQGLIPWNGKQDILIDRFDGRALLXXXXXXXXXXXXVQXXXXXXXXXX 182
           YRDD LYQATQDQQGLIPWNGKQD+LIDRFDGRALL            V           
Sbjct: 51  YRDDALYQATQDQQGLIPWNGKQDVLIDRFDGRALL--DFIRDSSHRRVPEKSEEEEELE 108

Query: 183 XFVNFERYRDLIKH 224
            FVNFERYRDLIKH
Sbjct: 109 EFVNFERYRDLIKH 122


>ref|XP_003611746.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
            gi|355513081|gb|AES94704.1| Splicing factor,
            arginine/serine-rich [Medicago truncatula]
          Length = 641

 Score =  200 bits (509), Expect(2) = 2e-70
 Identities = 119/265 (44%), Positives = 143/265 (53%), Gaps = 2/265 (0%)
 Frame = +1

Query: 247  DEEGLQHVNQEMEAKHVALFGLDRSHPAQPPPAASKGAYSQVGFSYDGDGKQETYYXXXX 426
            DE+ LQHVN EMEAK  A F  DRS+ +QP  AA+KG+YSQVGFSYDG+GK+E+      
Sbjct: 129  DEDALQHVNLEMEAKAAAPFASDRSNVSQP--AATKGSYSQVGFSYDGNGKEESQISDDD 186

Query: 427  XXXXXXXXXXXXXXXXXXXXXXXXGMDLIAKEFGVKRYGWLVYMDXXXXXXXXXXXXXXX 606
                                    GM++IAKE+GVKRYGWLVYMD               
Sbjct: 187  DEEDEDDEDDEDFNSDDSNDE---GMEIIAKEYGVKRYGWLVYMDKKAKEEQKRQKEIIK 243

Query: 607  GDPAIRKLSRKERRKASQIXXXXXXXXXXXXXXXVLHHDPYRESRRSPTYEA--XXXXXX 780
            GDPAIRKLSRKERRKASQ+               VLHHDPYRESR+SPTYEA        
Sbjct: 244  GDPAIRKLSRKERRKASQVEREREREATRIPGTRVLHHDPYRESRQSPTYEAYSRSRRSR 303

Query: 781  XXXXXXXXXXXXXHGRGVHADDVPRSKSKAPKIEYITEFGGAGEGDEPKIAGYXXXXXXX 960
                         + R  H DD+ R+KSK PKIEYITEFGG+GE D  +  G+       
Sbjct: 304  SRSRSYSPSYARRYSRSSHFDDILRNKSKTPKIEYITEFGGSGEADGTRREGFSPPRSPT 363

Query: 961  XEAGSLNRSENLTFHSCKDRLDSQY 1035
                +LNRSE +   + +   D+ Y
Sbjct: 364  SRVDTLNRSEIVRVTAKRKMEDTSY 388



 Score = 93.6 bits (231), Expect(2) = 2e-70
 Identities = 49/74 (66%), Positives = 50/74 (67%)
 Frame = +3

Query: 3   YRDDGLYQATQDQQGLIPWNGKQDILIDRFDGRALLXXXXXXXXXXXXVQXXXXXXXXXX 182
           YRDD LYQAT+DQQGLIPWNGKQDILIDRFDGRALL            VQ          
Sbjct: 51  YRDDALYQATEDQQGLIPWNGKQDILIDRFDGRALL--DFIRDSSFRRVQEKSEEEEELE 108

Query: 183 XFVNFERYRDLIKH 224
            FVNFERYRDLIKH
Sbjct: 109 EFVNFERYRDLIKH 122


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