BLASTX nr result

ID: Panax21_contig00002202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002202
         (924 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530585.1| nascent polypeptide associated complex alpha...   140   8e-32

>ref|XP_002530585.1| nascent polypeptide associated complex alpha subunit, putative
           [Ricinus communis] gi|223529884|gb|EEF31815.1| nascent
           polypeptide associated complex alpha subunit, putative
           [Ricinus communis]
          Length = 687

 Score =  140 bits (352), Expect(2) = 8e-32
 Identities = 90/261 (34%), Positives = 130/261 (49%), Gaps = 2/261 (0%)
 Frame = -3

Query: 910 RGNWFSIHFMYQALHDEYKAIVHG*GFVMFFSILPRRC-PWGYLRALSERWFHQTQSLHL 734
           + NW     +      EYK ++   GF  F SI P R    GY+ AL ER+F +T +LHL
Sbjct: 223 QNNWTRAFKICSNAAVEYKRLLLDAGFGDFLSIQPFRINSGGYMSALVERYFSETHTLHL 282

Query: 733 LDCEVMMTPMDWRFITGMEFGGEPVPCTADITPTTVRSLLGVPAEVLKGRTVRTGPLSID 554
              E+  TP+ W  ITG+ FGG+P+    DITP     LLG+     +G     G L +D
Sbjct: 283 GTFEIGPTPLAWTMITGITFGGDPLN-PPDITPEECIKLLGLVGTESEG-FFSQGKLKLD 340

Query: 553 AMSGLLSEXXXXXXXXXXXXXXXXXXXXXRG-CFIADNSSTVSFALISATRHVDRIGEYD 377
            +  L  +                      G CF +     +   L+SA  ++ +I +YD
Sbjct: 341 VLCPLTLDFRKKPANSDLEWMFRRLILYLVGSCFFSGPDMMIPIRLVSAMSNIQKISQYD 400

Query: 376 WGSYTFAYFLRGMRM*SQGLTEAWL*FYPFLLFWAYERLPCLRPVSVLGLDTYPRGRRWH 197
           WG+ TF+ FLRGMR  +      +  FYPFLL WAYE +P  RP++    D +PR R+W 
Sbjct: 401 WGAATFSAFLRGMRHKTSECRGTFSGFYPFLLLWAYEHIPYQRPLTNFDPDIFPRARQWD 460

Query: 196 HSILAEVPVAEGFTHCRLQLK 134
            + + +VP +  FT  RL+L+
Sbjct: 461 LTKM-DVPNSNDFTWYRLELE 480



 Score = 23.9 bits (50), Expect(2) = 8e-32
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -1

Query: 42  WELYLGERAIR 10
           WELY+GER +R
Sbjct: 520 WELYMGERNLR 530


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