BLASTX nr result

ID: Panax21_contig00002196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002196
         (603 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267490.2| PREDICTED: probable ubiquitin-conjugating en...   131   8e-29
ref|XP_002519066.1| ubiquitin conjugating enzyme, putative [Rici...   110   2e-22
ref|XP_002329823.1| predicted protein [Populus trichocarpa] gi|2...   106   3e-21
ref|XP_002305135.1| predicted protein [Populus trichocarpa] gi|2...   105   6e-21
gb|ACB12194.1| PHO2 [Nicotiana benthamiana]                           101   9e-20

>ref|XP_002267490.2| PREDICTED: probable ubiquitin-conjugating enzyme E2 24-like [Vitis
            vinifera] gi|297735992|emb|CBI23966.3| unnamed protein
            product [Vitis vinifera]
          Length = 944

 Score =  131 bits (330), Expect = 8e-29
 Identities = 76/200 (38%), Positives = 107/200 (53%), Gaps = 1/200 (0%)
 Frame = +3

Query: 6    IGIIAGFNNGNVEVKWGTGLKTKVAPNEIIRVDKYEGSSVTPELHDXXXXXXXXXXXXXX 185
            IG + GF +G V+VKW TGL T+VAPNEI R+DK+EGSS TPE  +              
Sbjct: 468  IGNVVGFKDGGVKVKWATGLTTQVAPNEIFRIDKFEGSSTTPE--ENIEELNHELIEDDN 525

Query: 186  XSMVNEGKDLVDSNIDGKDCLQKSVDSSSLSLPRVAIGFFSNIATNLFXXXXXXXXXXXX 365
             S   + KD+ D NI  KDC +    S+S  LPR  IGFF +IA +LF            
Sbjct: 526  QSSPGKEKDVSDLNIVDKDCTKYPWQSTSSLLPRAVIGFFLSIAASLFGSPDSALLSGQL 585

Query: 366  XHVQYCQPRSKMPSEME-VLELCNLCTAEQSLEAGDFETFAERNSEQKVEAIQKREDFLS 542
                  +  ++  + ++ VL  CN CT EQ +   D +   E + +++++ I   +D   
Sbjct: 586  SSSHCSEDENESGTHLKGVLNSCNPCTEEQHIVVDDLQASGETSVKEEIKEIGGDKDLPF 645

Query: 543  PSGSKSPEIFLKFDMISDCS 602
             SGSK+PE F +FDM+ DCS
Sbjct: 646  SSGSKNPEQFSQFDMVCDCS 665


>ref|XP_002519066.1| ubiquitin conjugating enzyme, putative [Ricinus communis]
            gi|223541729|gb|EEF43277.1| ubiquitin conjugating enzyme,
            putative [Ricinus communis]
          Length = 925

 Score =  110 bits (275), Expect = 2e-22
 Identities = 74/207 (35%), Positives = 104/207 (50%), Gaps = 8/207 (3%)
 Frame = +3

Query: 6    IGIIAGFNNGNVEVKWGTGLKTKVAPNEIIRVDKYEGSSVTPELH-------DXXXXXXX 164
            IG ++GF +G VEV W +GL+TKVAPN+I R+DKY+ S     L+       D       
Sbjct: 454  IGYVSGFKDGAVEVTWASGLQTKVAPNDIFRIDKYQSSPANSVLNVNEQNIDDVNLNQEM 513

Query: 165  XXXXXXXXSMVNEGKDLVDSNIDGKDCLQKSVDSSSLSLPRVAIGFFSNIATNLFXXXXX 344
                    S+  +GKDL  S+    +C Q S  +SS  LPR  IGFF +IA ++F     
Sbjct: 514  IGLDKQSSSL--KGKDL-QSSSSNSECKQGSWKASSFFLPRSTIGFFRSIAASIFESFGS 570

Query: 345  XXXXXXXXHVQYCQPRS-KMPSEMEVLELCNLCTAEQSLEAGDFETFAERNSEQKVEAIQ 521
                       +      K   E E +E  +LCT  QSL  G  ++F   +  Q+V  IQ
Sbjct: 571  TSSCSVSSGPVFKDGNQLKSVEEKENMENNDLCTEMQSLIPGGMQSFENASLNQEVNDIQ 630

Query: 522  KREDFLSPSGSKSPEIFLKFDMISDCS 602
            + ++  S  GSKS E F +F+M+ DCS
Sbjct: 631  ENKEVQSLFGSKSEERFRQFEMVDDCS 657


>ref|XP_002329823.1| predicted protein [Populus trichocarpa] gi|222870885|gb|EEF08016.1|
            predicted protein [Populus trichocarpa]
          Length = 924

 Score =  106 bits (265), Expect = 3e-21
 Identities = 72/203 (35%), Positives = 102/203 (50%), Gaps = 4/203 (1%)
 Frame = +3

Query: 6    IGIIAGFNNGNVEVKWGTGLKTKVAPNEIIRVDKYEGSSVTPELHDXXXXXXXXXXXXXX 185
            IG + GF +G+VEV W + LKTKV+PN+I R+DK E S+ T   H+              
Sbjct: 453  IGYVTGFEDGSVEVTWASSLKTKVSPNDIFRIDKNEVSAETMVQHEQREEEVNQETVDHD 512

Query: 186  XSM-VNEGKDLVDSNIDGKDCLQKSVDSSSLS-LPRVAIGFFSNIATNLFXXXXXXXXXX 359
                V +GKDL++S   G +  +   +SSS S LP+ A+GFFS I   +F          
Sbjct: 513  KQFSVLKGKDLLNSISIGDESTKCPWESSSFSLLPQSALGFFSRITGGIFGPFGSTSVSG 572

Query: 360  XXXHVQYCQPRS--KMPSEMEVLELCNLCTAEQSLEAGDFETFAERNSEQKVEAIQKRED 533
                    +  +  K P E E  E C+LC   Q L AGD   F   N + ++   Q+ ++
Sbjct: 573  PVASDLISEDGNEFKTPEEKENPEACDLCMEMQPLVAGDMLRFEGTNLKLEINDDQESKE 632

Query: 534  FLSPSGSKSPEIFLKFDMISDCS 602
              S S SK PE F +FDM++ CS
Sbjct: 633  HRSSSASKRPEPFDQFDMVAVCS 655


>ref|XP_002305135.1| predicted protein [Populus trichocarpa] gi|222848099|gb|EEE85646.1|
            predicted protein [Populus trichocarpa]
          Length = 925

 Score =  105 bits (262), Expect = 6e-21
 Identities = 68/202 (33%), Positives = 96/202 (47%), Gaps = 3/202 (1%)
 Frame = +3

Query: 6    IGIIAGFNNGNVEVKWGTGLKTKVAPNEIIRVDKYEGSSVTPELHDXXXXXXXXXXXXXX 185
            IG + GF +G+VEV W + LKTKV+PN I R+D+ E S+ T   H+              
Sbjct: 455  IGCVTGFEDGDVEVTWASSLKTKVSPNHIFRIDRCEVSAETIMQHEQREEEVNKETVDHD 514

Query: 186  XSM-VNEGKDLVDSNIDGKDCLQKSVDSSSLSLPRVAIGFFSNIATNLFXXXXXXXXXXX 362
                + +GKD ++S   G +  +   +SSS SLP   +GFFS I   +F           
Sbjct: 515  EQFSILKGKDSLNSISFGNENAKCPWESSSFSLPEFTLGFFSRITEGIFGSFGSTSVSGP 574

Query: 363  XXHVQYCQP--RSKMPSEMEVLELCNLCTAEQSLEAGDFETFAERNSEQKVEAIQKREDF 536
                   +   RSK P E E LE C+LC   Q    GD   F   N + +    ++ ++ 
Sbjct: 575  ISSDSISEDGNRSKTPEEKEKLETCDLCMELQPSVVGDILRFEGTNLKPEANDDKESKEH 634

Query: 537  LSPSGSKSPEIFLKFDMISDCS 602
             S S S S E F +FDM+ DCS
Sbjct: 635  RSLSASNSSEQFKRFDMVVDCS 656


>gb|ACB12194.1| PHO2 [Nicotiana benthamiana]
          Length = 921

 Score =  101 bits (252), Expect = 9e-20
 Identities = 69/200 (34%), Positives = 100/200 (50%), Gaps = 1/200 (0%)
 Frame = +3

Query: 6    IGIIAGFNNGNVEVKWGTGLKTKVAPNEIIRVDKYE-GSSVTPELHDXXXXXXXXXXXXX 182
            IGII GF +GN+EVKW TG+ + VAP EI R+DK E  +++     +             
Sbjct: 458  IGIIVGFEDGNIEVKWATGITSTVAPFEIYRMDKCEAAAAINVPSGENAEPSGAEMSSEE 517

Query: 183  XXSMVNEGKDLVDSNIDGKDCLQKSVDSSSLSLPRVAIGFFSNIATNLFXXXXXXXXXXX 362
                  E KDL     D + C +   +SSS  L + AIG FS+I ++LF           
Sbjct: 518  NQLPKPEEKDLPKFCADSESCNRSLWNSSSCLLSQAAIGSFSSITSSLFGSLSTSLFGTY 577

Query: 363  XXHVQYCQPRSKMPSEMEVLELCNLCTAEQSLEAGDFETFAERNSEQKVEAIQKREDFLS 542
                +  Q  S++P+E EV+EL NL     +LE G  +   E   EQ+ E  + ++ +  
Sbjct: 578  QAISEEGQ-ESRIPNEEEVIELSNLNAGIPTLEVGYVKASLEMELEQEQETTEDQKHYAL 636

Query: 543  PSGSKSPEIFLKFDMISDCS 602
            PS SK PE F +FDM++  S
Sbjct: 637  PSSSKLPEDFRQFDMVTGFS 656


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