BLASTX nr result

ID: Panax21_contig00002174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002174
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera]    97   3e-18
ref|XP_002306660.1| predicted protein [Populus trichocarpa] gi|2...    97   3e-18
ref|XP_003580687.1| PREDICTED: pseudouridine-5'-monophosphatase-...    96   6e-18
ref|XP_004146584.1| PREDICTED: pseudouridine-5'-monophosphatase-...    95   1e-17
dbj|BAK06109.1| predicted protein [Hordeum vulgare subsp. vulgar...    94   2e-17

>emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera]
          Length = 891

 Score = 97.1 bits (240), Expect = 3e-18
 Identities = 46/59 (77%), Positives = 51/59 (86%)
 Frame = -2

Query: 184 SANLSTESYSTILSEHVSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNTIKTIVSVLSTL 8
           +ANLSTE YST+LSE  SGVYFGWAGLS +GVYKMVMSIGWNPYF+NT KTIVS   T+
Sbjct: 755 TANLSTEGYSTLLSEQSSGVYFGWAGLSKQGVYKMVMSIGWNPYFNNTEKTIVSATWTV 813


>ref|XP_002306660.1| predicted protein [Populus trichocarpa] gi|222856109|gb|EEE93656.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 44/52 (84%), Positives = 48/52 (92%)
 Frame = -2

Query: 184 SANLSTESYSTILSEHVSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNTIKTI 29
           +ANLST+ YS +LSEH SGVYFGWAGLSTRGVYKMVMSIGWNPYF+NT KTI
Sbjct: 260 TANLSTKGYSALLSEHPSGVYFGWAGLSTRGVYKMVMSIGWNPYFNNTEKTI 311


>ref|XP_003580687.1| PREDICTED: pseudouridine-5'-monophosphatase-like [Brachypodium
           distachyon]
          Length = 397

 Score = 95.9 bits (237), Expect = 6e-18
 Identities = 43/52 (82%), Positives = 47/52 (90%)
 Frame = -2

Query: 184 SANLSTESYSTILSEHVSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNTIKTI 29
           +ANL  E++S ILSEH SGVYFGWAGLSTRG+YKMVMSIGWNPYFDNT KTI
Sbjct: 260 TANLPAENFSDILSEHTSGVYFGWAGLSTRGIYKMVMSIGWNPYFDNTEKTI 311


>ref|XP_004146584.1| PREDICTED: pseudouridine-5'-monophosphatase-like [Cucumis sativus]
           gi|449488415|ref|XP_004158027.1| PREDICTED:
           pseudouridine-5'-monophosphatase-like [Cucumis sativus]
          Length = 386

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 42/52 (80%), Positives = 47/52 (90%)
 Frame = -2

Query: 184 SANLSTESYSTILSEHVSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNTIKTI 29
           +ANLSTE YS +LSEH SGVYFGWAGLSTRG++KMVMSIGWNP+FDN  KTI
Sbjct: 264 TANLSTEGYSDVLSEHPSGVYFGWAGLSTRGIFKMVMSIGWNPFFDNVEKTI 315


>dbj|BAK06109.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326525355|dbj|BAK07947.1| predicted protein [Hordeum
           vulgare subsp. vulgare] gi|326530464|dbj|BAJ97658.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326530718|dbj|BAK01157.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 397

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 42/52 (80%), Positives = 47/52 (90%)
 Frame = -2

Query: 184 SANLSTESYSTILSEHVSGVYFGWAGLSTRGVYKMVMSIGWNPYFDNTIKTI 29
           +ANL+ E++S ILSEH SGVYFGWAGLS RG+YKMVMSIGWNPYFDNT KTI
Sbjct: 260 TANLAAENFSDILSEHTSGVYFGWAGLSKRGIYKMVMSIGWNPYFDNTEKTI 311


Top