BLASTX nr result

ID: Panax21_contig00002155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002155
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274917.2| PREDICTED: dihydroorotase, mitochondrial-lik...   235   3e-60
emb|CBI21866.3| unnamed protein product [Vitis vinifera]              218   5e-55
ref|XP_002517898.1| Dihydroorotase, mitochondrial precursor, put...   218   5e-55
ref|XP_002310399.1| predicted protein [Populus trichocarpa] gi|2...   216   2e-54
dbj|BAF00239.1| dihydroorotase [Arabidopsis thaliana]                 213   1e-53

>ref|XP_002274917.2| PREDICTED: dihydroorotase, mitochondrial-like [Vitis vinifera]
          Length = 377

 Score =  235 bits (599), Expect = 3e-60
 Identities = 117/155 (75%), Positives = 130/155 (83%)
 Frame = -1

Query: 467 ASNLPFGKVRRSNQVKAGRAKMELSITKPDDWHLHLRDGDLLEAVVSHSAHNFGRAVIMP 288
           AS LPF ++   NQVK   A+MELS+T+PDDWHLHLRDGDLLEAVVSHSA +FGR ++MP
Sbjct: 11  ASILPFARIEVPNQVKVKGARMELSLTQPDDWHLHLRDGDLLEAVVSHSASHFGRGIVMP 70

Query: 287 NLRPPIXXXXXXXAYHESILKVLPNDSNFIPLMTLYLTDSTSPHEIKLARESGVVFAVKL 108
           NL+PPI       AY ESILK LP + +F PLMTLYLTD TSP+EIKLAR SGVVFAVKL
Sbjct: 71  NLKPPITTTAAAVAYRESILKALPANCDFTPLMTLYLTDKTSPNEIKLARNSGVVFAVKL 130

Query: 107 YPAGATTNSQDGVTDLFGKCVTVLEEMVEQNMPLL 3
           YPAGATTNSQDGVTDLFGKC+ VLEEMVEQNMPLL
Sbjct: 131 YPAGATTNSQDGVTDLFGKCLPVLEEMVEQNMPLL 165


>emb|CBI21866.3| unnamed protein product [Vitis vinifera]
          Length = 346

 Score =  218 bits (554), Expect = 5e-55
 Identities = 107/134 (79%), Positives = 117/134 (87%)
 Frame = -1

Query: 404 MELSITKPDDWHLHLRDGDLLEAVVSHSAHNFGRAVIMPNLRPPIXXXXXXXAYHESILK 225
           MELS+T+PDDWHLHLRDGDLLEAVVSHSA +FGR ++MPNL+PPI       AY ESILK
Sbjct: 1   MELSLTQPDDWHLHLRDGDLLEAVVSHSASHFGRGIVMPNLKPPITTTAAAVAYRESILK 60

Query: 224 VLPNDSNFIPLMTLYLTDSTSPHEIKLARESGVVFAVKLYPAGATTNSQDGVTDLFGKCV 45
            LP + +F PLMTLYLTD TSP+EIKLAR SGVVFAVKLYPAGATTNSQDGVTDLFGKC+
Sbjct: 61  ALPANCDFTPLMTLYLTDKTSPNEIKLARNSGVVFAVKLYPAGATTNSQDGVTDLFGKCL 120

Query: 44  TVLEEMVEQNMPLL 3
            VLEEMVEQNMPLL
Sbjct: 121 PVLEEMVEQNMPLL 134


>ref|XP_002517898.1| Dihydroorotase, mitochondrial precursor, putative [Ricinus
           communis] gi|223542880|gb|EEF44416.1| Dihydroorotase,
           mitochondrial precursor, putative [Ricinus communis]
          Length = 398

 Score =  218 bits (554), Expect = 5e-55
 Identities = 107/136 (78%), Positives = 120/136 (88%)
 Frame = -1

Query: 410 AKMELSITKPDDWHLHLRDGDLLEAVVSHSAHNFGRAVIMPNLRPPIXXXXXXXAYHESI 231
           + MEL+IT+PDDWHLHLRDG++LEAVV HSA +FGRA+IMPNL+PPI       AY ESI
Sbjct: 51  SNMELTITRPDDWHLHLRDGEMLEAVVPHSASHFGRAIIMPNLKPPITTAVAALAYRESI 110

Query: 230 LKVLPNDSNFIPLMTLYLTDSTSPHEIKLARESGVVFAVKLYPAGATTNSQDGVTDLFGK 51
           LK LP +S+F PLMTLYLTD+TSP+EIKLAR SGVVFAVKLYPAGATTNSQDGVTDLFGK
Sbjct: 111 LKALPANSDFSPLMTLYLTDTTSPNEIKLARRSGVVFAVKLYPAGATTNSQDGVTDLFGK 170

Query: 50  CVTVLEEMVEQNMPLL 3
           C+ VLEEMVEQNMPLL
Sbjct: 171 CLPVLEEMVEQNMPLL 186


>ref|XP_002310399.1| predicted protein [Populus trichocarpa] gi|222853302|gb|EEE90849.1|
           predicted protein [Populus trichocarpa]
          Length = 346

 Score =  216 bits (549), Expect = 2e-54
 Identities = 106/134 (79%), Positives = 117/134 (87%)
 Frame = -1

Query: 404 MELSITKPDDWHLHLRDGDLLEAVVSHSAHNFGRAVIMPNLRPPIXXXXXXXAYHESILK 225
           MEL+IT+PDDWHLHLRDG+LL+AV  HSA+ FGRA++MPNL+PPI       AY ESILK
Sbjct: 1   MELTITQPDDWHLHLRDGELLQAVAPHSANFFGRAIVMPNLKPPITSTAVAAAYRESILK 60

Query: 224 VLPNDSNFIPLMTLYLTDSTSPHEIKLARESGVVFAVKLYPAGATTNSQDGVTDLFGKCV 45
            LP DS+F PLMTLYLTD+TSP EIKLARESGVVFAVKLYPAGATTNSQDGVTDLFGKC+
Sbjct: 61  ALPADSDFSPLMTLYLTDTTSPREIKLARESGVVFAVKLYPAGATTNSQDGVTDLFGKCL 120

Query: 44  TVLEEMVEQNMPLL 3
            VLEEM EQNMPLL
Sbjct: 121 PVLEEMAEQNMPLL 134


>dbj|BAF00239.1| dihydroorotase [Arabidopsis thaliana]
          Length = 366

 Score =  213 bits (543), Expect = 1e-53
 Identities = 103/146 (70%), Positives = 120/146 (82%)
 Frame = -1

Query: 440 RRSNQVKAGRAKMELSITKPDDWHLHLRDGDLLEAVVSHSAHNFGRAVIMPNLRPPIXXX 261
           R S +VK    +MEL+IT+PDDWHLHLRDGDLL AVV HSA NF RA++MPNL+PP+   
Sbjct: 10  RSSEKVKTRAVRMELTITQPDDWHLHLRDGDLLHAVVPHSASNFKRAIVMPNLKPPVTST 69

Query: 260 XXXXAYHESILKVLPNDSNFIPLMTLYLTDSTSPHEIKLARESGVVFAVKLYPAGATTNS 81
                Y + I+K LP++S+F PLMTLYLTD T P EI+LARESGVV+AVKLYPAGATTNS
Sbjct: 70  AAAIIYRKFIMKALPSESSFDPLMTLYLTDKTLPEEIRLARESGVVYAVKLYPAGATTNS 129

Query: 80  QDGVTDLFGKCVTVLEEMVEQNMPLL 3
           QDGVTDLFGKC+ VLEEMV+QNMPLL
Sbjct: 130 QDGVTDLFGKCLPVLEEMVKQNMPLL 155


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