BLASTX nr result

ID: Panax21_contig00002145 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002145
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273082.1| PREDICTED: sorting and assembly machinery co...   141   5e-32
emb|CBI25445.3| unnamed protein product [Vitis vinifera]              141   5e-32
emb|CAN84130.1| hypothetical protein VITISV_041873 [Vitis vinifera]   141   5e-32
ref|XP_003564528.1| PREDICTED: sorting and assembly machinery co...   126   2e-27
gb|EAY98386.1| hypothetical protein OsI_20297 [Oryza sativa Indi...   124   1e-26

>ref|XP_002273082.1| PREDICTED: sorting and assembly machinery component 50 homolog
           B-like [Vitis vinifera]
          Length = 534

 Score =  141 bits (356), Expect = 5e-32
 Identities = 66/93 (70%), Positives = 76/93 (81%)
 Frame = +2

Query: 65  QARSWSLEGSVKLKNLFGYGDL*DGSLIYGWDQMSEVSAGVSLPRFNGLVTPMMARVSLI 244
           +AR+WSLEGS+KLKNLFGYGDL DGSL+YGWDQ SE+SAGVSLPRF G+VTPM+ARVSL+
Sbjct: 175 EARTWSLEGSLKLKNLFGYGDLWDGSLVYGWDQSSEISAGVSLPRFKGMVTPMLARVSLL 234

Query: 245 SQDWLKFSSYKEQXXXXXXXXXXXTNHDVAYNL 343
           SQDWLKFSSYKE+             HD+ YNL
Sbjct: 235 SQDWLKFSSYKERSLGLNLGLISTKRHDLTYNL 267


>emb|CBI25445.3| unnamed protein product [Vitis vinifera]
          Length = 464

 Score =  141 bits (356), Expect = 5e-32
 Identities = 66/93 (70%), Positives = 76/93 (81%)
 Frame = +2

Query: 65  QARSWSLEGSVKLKNLFGYGDL*DGSLIYGWDQMSEVSAGVSLPRFNGLVTPMMARVSLI 244
           +AR+WSLEGS+KLKNLFGYGDL DGSL+YGWDQ SE+SAGVSLPRF G+VTPM+ARVSL+
Sbjct: 105 EARTWSLEGSLKLKNLFGYGDLWDGSLVYGWDQSSEISAGVSLPRFKGMVTPMLARVSLL 164

Query: 245 SQDWLKFSSYKEQXXXXXXXXXXXTNHDVAYNL 343
           SQDWLKFSSYKE+             HD+ YNL
Sbjct: 165 SQDWLKFSSYKERSLGLNLGLISTKRHDLTYNL 197


>emb|CAN84130.1| hypothetical protein VITISV_041873 [Vitis vinifera]
          Length = 564

 Score =  141 bits (356), Expect = 5e-32
 Identities = 66/93 (70%), Positives = 76/93 (81%)
 Frame = +2

Query: 65  QARSWSLEGSVKLKNLFGYGDL*DGSLIYGWDQMSEVSAGVSLPRFNGLVTPMMARVSLI 244
           +AR+WSLEGS+KLKNLFGYGDL DGSL+YGWDQ SE+SAGVSLPRF G+VTPM+ARVSL+
Sbjct: 175 EARTWSLEGSLKLKNLFGYGDLWDGSLVYGWDQSSEISAGVSLPRFKGMVTPMLARVSLL 234

Query: 245 SQDWLKFSSYKEQXXXXXXXXXXXTNHDVAYNL 343
           SQDWLKFSSYKE+             HD+ YNL
Sbjct: 235 SQDWLKFSSYKERSLGLNLGLISTKRHDLTYNL 267


>ref|XP_003564528.1| PREDICTED: sorting and assembly machinery component 50 homolog
           [Brachypodium distachyon]
          Length = 531

 Score =  126 bits (317), Expect = 2e-27
 Identities = 61/98 (62%), Positives = 73/98 (74%)
 Frame = +2

Query: 65  QARSWSLEGSVKLKNLFGYGDL*DGSLIYGWDQMSEVSAGVSLPRFNGLVTPMMARVSLI 244
           +ARSWSLEGS+KLKNLFGYGD+ D S  YGWDQ SEV+ GVSLPRF  + TP+ AR SL+
Sbjct: 171 EARSWSLEGSLKLKNLFGYGDIWDASGAYGWDQSSEVAVGVSLPRFKSVPTPLTARASLL 230

Query: 245 SQDWLKFSSYKEQXXXXXXXXXXXTNHDVAYNLS*QKL 358
           SQDWLKFSSYKE+            +HD++YNL+ Q L
Sbjct: 231 SQDWLKFSSYKERLLGLSFGLLSTRHHDLSYNLTWQTL 268


>gb|EAY98386.1| hypothetical protein OsI_20297 [Oryza sativa Indica Group]
          Length = 520

 Score =  124 bits (310), Expect = 1e-26
 Identities = 60/94 (63%), Positives = 68/94 (72%)
 Frame = +2

Query: 65  QARSWSLEGSVKLKNLFGYGDL*DGSLIYGWDQMSEVSAGVSLPRFNGLVTPMMARVSLI 244
           +ARSWSLEGSVKLKNLFGYGD+ D S  Y WDQ SEV  GVSLPRF  + TP+MAR SL 
Sbjct: 161 EARSWSLEGSVKLKNLFGYGDIWDASGAYSWDQTSEVGIGVSLPRFKSISTPLMARASLS 220

Query: 245 SQDWLKFSSYKEQXXXXXXXXXXXTNHDVAYNLS 346
           SQDWLKFSSYKE+             HD++YNL+
Sbjct: 221 SQDWLKFSSYKERLLGLSFGLISTMQHDLSYNLT 254


Top