BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002122
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putati...    79   1e-33
ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts...    79   3e-33
ref|XP_003517385.1| PREDICTED: regulator of nonsense transcripts...    73   5e-31
ref|XP_002326699.1| predicted protein [Populus trichocarpa] gi|2...    77   3e-28
gb|ABK96558.1| unknown [Populus trichocarpa x Populus deltoides]       77   3e-28

>ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
            gi|223531797|gb|EEF33616.1| nonsense-mediated mRNA decay
            protein, putative [Ricinus communis]
          Length = 1280

 Score = 79.0 bits (193), Expect(3) = 1e-33
 Identities = 39/59 (66%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
 Frame = -3

Query: 173  MPRVPIPPYHGGP--QPYAIPTRGAVHEXXXXXXXXXXXXXXGFGAGRGNAGTPIGSHL 3
            MPRVP+PP+HGGP  QPYAIPTRGAVH               GFGAGRGNAG PIGSHL
Sbjct: 1008 MPRVPVPPFHGGPPSQPYAIPTRGAVHGPVGAVPHVPSPGSRGFGAGRGNAGAPIGSHL 1066



 Score = 71.6 bits (174), Expect(3) = 1e-33
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -1

Query: 364  SQNADRRSSRSRGSFMPPGPPNGTHKPGLHTAGYPMPR 251
            S N+DRRSSR RGS+MPPGPPNGTHKP +H  G+PMPR
Sbjct: 973  SPNSDRRSSRGRGSYMPPGPPNGTHKPSVHPTGFPMPR 1010



 Score = 38.1 bits (87), Expect(3) = 1e-33
 Identities = 16/20 (80%), Positives = 19/20 (95%)
 Frame = -3

Query: 425  FFGGGPGIMSNDSFGSVASA 366
            FFGGGPGI+SND+FGS AS+
Sbjct: 953  FFGGGPGIVSNDNFGSGASS 972


>ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts 1 homolog [Vitis
            vinifera] gi|297742168|emb|CBI33955.3| unnamed protein
            product [Vitis vinifera]
          Length = 1267

 Score = 78.6 bits (192), Expect(3) = 3e-33
 Identities = 39/59 (66%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
 Frame = -3

Query: 173  MPRVPIPPYHGGP--QPYAIPTRGAVHEXXXXXXXXXXXXXXGFGAGRGNAGTPIGSHL 3
            MPRVP+PP+HGGP  QPYAIPTRGAVH               GFGAGRGNAG PIGSHL
Sbjct: 986  MPRVPLPPFHGGPPSQPYAIPTRGAVHGPVGAVPHVPPPGSRGFGAGRGNAGAPIGSHL 1044



 Score = 72.8 bits (177), Expect(3) = 3e-33
 Identities = 31/44 (70%), Positives = 36/44 (81%)
 Frame = -1

Query: 382  GLLPRPSQNADRRSSRSRGSFMPPGPPNGTHKPGLHTAGYPMPR 251
            G +   S +ADRRSSR RGS+MP GPPNGTHKPG+H AG+PMPR
Sbjct: 945  GTVTSSSPSADRRSSRGRGSYMPSGPPNGTHKPGVHPAGFPMPR 988



 Score = 36.2 bits (82), Expect(3) = 3e-33
 Identities = 14/20 (70%), Positives = 18/20 (90%)
 Frame = -3

Query: 425 FFGGGPGIMSNDSFGSVASA 366
           FFGGGPGI+ ND+FG+V S+
Sbjct: 931 FFGGGPGIVPNDNFGTVTSS 950


>ref|XP_003517385.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine max]
          Length = 1266

 Score = 73.2 bits (178), Expect(3) = 5e-31
 Identities = 35/59 (59%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
 Frame = -3

Query: 173  MPRVPIPPYHGGPQ--PYAIPTRGAVHEXXXXXXXXXXXXXXGFGAGRGNAGTPIGSHL 3
            +PRVP+PP+HGGPQ  PYAIP+RGAVH               GFGAGRGN+G PIG+HL
Sbjct: 996  VPRVPLPPFHGGPQSQPYAIPSRGAVHGPVGAVPHVPSPGSRGFGAGRGNSGAPIGNHL 1054



 Score = 70.9 bits (172), Expect(3) = 5e-31
 Identities = 28/36 (77%), Positives = 34/36 (94%)
 Frame = -1

Query: 358  NADRRSSRSRGSFMPPGPPNGTHKPGLHTAGYPMPR 251
            ++DRRSSR RGS++PPGPPNGTHKPG+H AGYP+PR
Sbjct: 963  SSDRRSSRGRGSYIPPGPPNGTHKPGVHPAGYPVPR 998



 Score = 35.8 bits (81), Expect(3) = 5e-31
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = -3

Query: 425 FFGGGPGIMSNDSFGSVAS 369
           F+GGGPGI +ND+FGSV S
Sbjct: 940 FYGGGPGIAANDNFGSVGS 958


>ref|XP_002326699.1| predicted protein [Populus trichocarpa] gi|222834021|gb|EEE72498.1|
            predicted protein [Populus trichocarpa]
          Length = 1256

 Score = 76.6 bits (187), Expect(2) = 3e-28
 Identities = 39/59 (66%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
 Frame = -3

Query: 173  MPRVPIPPYHGGP--QPYAIPTRGAVHEXXXXXXXXXXXXXXGFGAGRGNAGTPIGSHL 3
            MPRVPIPP+HG P  QPYAIPTRGAVH               GFGAGRGNAG PIGSHL
Sbjct: 985  MPRVPIPPFHGDPPSQPYAIPTRGAVHGPIGAVPQVPQPGIRGFGAGRGNAGAPIGSHL 1043



 Score = 73.6 bits (179), Expect(2) = 3e-28
 Identities = 31/44 (70%), Positives = 36/44 (81%)
 Frame = -1

Query: 382  GLLPRPSQNADRRSSRSRGSFMPPGPPNGTHKPGLHTAGYPMPR 251
            G +   S NADRR+SR+RGS+MPP PPNGTHKPG H AG+PMPR
Sbjct: 944  GSVASASPNADRRNSRARGSYMPPAPPNGTHKPGAHPAGFPMPR 987


>gb|ABK96558.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 582

 Score = 76.6 bits (187), Expect(2) = 3e-28
 Identities = 39/59 (66%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
 Frame = -3

Query: 173 MPRVPIPPYHGGP--QPYAIPTRGAVHEXXXXXXXXXXXXXXGFGAGRGNAGTPIGSHL 3
           MPRVPIPP+HG P  QPYAIPTRGAVH               GFGAGRGNAG PIGSHL
Sbjct: 311 MPRVPIPPFHGDPPSQPYAIPTRGAVHGPIGAVPQVPQPGSRGFGAGRGNAGAPIGSHL 369



 Score = 73.6 bits (179), Expect(2) = 3e-28
 Identities = 31/44 (70%), Positives = 36/44 (81%)
 Frame = -1

Query: 382 GLLPRPSQNADRRSSRSRGSFMPPGPPNGTHKPGLHTAGYPMPR 251
           G +   S NADRR+SR+RGS+MPP PPNGTHKPG H AG+PMPR
Sbjct: 270 GSVASASPNADRRNSRARGSYMPPAPPNGTHKPGAHPAGFPMPR 313