BLASTX nr result

ID: Panax21_contig00002077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002077
         (1885 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283852.1| PREDICTED: F-box-like/WD repeat-containing p...   665   0.0  
ref|XP_002306492.1| predicted protein [Populus trichocarpa] gi|2...   660   0.0  
emb|CBI33743.3| unnamed protein product [Vitis vinifera]              660   0.0  
ref|XP_002524944.1| Polyadenylation factor subunit, putative [Ri...   657   0.0  
ref|XP_002332225.1| predicted protein [Populus trichocarpa] gi|2...   654   0.0  

>ref|XP_002283852.1| PREDICTED: F-box-like/WD repeat-containing protein TBL1X-like isoform
            1 [Vitis vinifera]
          Length = 590

 Score =  665 bits (1717), Expect = 0.0
 Identities = 316/397 (79%), Positives = 347/397 (87%), Gaps = 2/397 (0%)
 Frame = +1

Query: 484  DKMNIEHEEN--IAGPEPMEIEAVDISTSSTTIPCVIPASDVMILEGHASEVFACAWSPS 657
            D + ++H+EN    GPEPM     DISTSST   C IP+SDV ILEGH SEV ACAWSP+
Sbjct: 199  DVVTVKHDENGVSGGPEPM-----DISTSSTFQACEIPSSDVTILEGHTSEVCACAWSPA 253

Query: 658  GPLLASGAGDSTARIWTIGDGPCSSNMQGGPLNSAVLKHSKGRTNEKSKDVTTLDWNGEG 837
            G LLASG+GDSTARIWTI DG C S++Q GP N  VLKH KGRTNEKSKDVTTLDWNG+G
Sbjct: 254  GSLLASGSGDSTARIWTIADGTCRSSVQNGPSNVLVLKHVKGRTNEKSKDVTTLDWNGDG 313

Query: 838  TFLATGSYDGQARIWNRDGELVSTLNKHKGPIFSLKWNKKGDYLLSGSVDKTAIVWDVKT 1017
            T LATGSYDGQARIW+ +GEL STL+KHKGPIFSLKWN+KGDYLL+GS DKTAIVWDVKT
Sbjct: 314  TLLATGSYDGQARIWSTNGELRSTLSKHKGPIFSLKWNRKGDYLLTGSCDKTAIVWDVKT 373

Query: 1018 GEWKQQFEFHSAPTLDVDWRNNVSFATCSTDTMIYVCKVGENRPIKTFAGHQGEVNAIKW 1197
             EWKQQFEFH+ PTLDVDWRNNVSFAT STD MIYVCK+GENRPIKTF+GHQGEVN +KW
Sbjct: 374  EEWKQQFEFHAGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFSGHQGEVNCVKW 433

Query: 1198 DPTGSLLASCSDDSTAKIWSMKQDTCLHDLKEHGKEIYTIKWSPTGPGTNNPNQQLVLAS 1377
            DPTG LLASCSDD TAKIWS+KQ+  LHDL+EH KEIYTI+WSPTG GTNNPNQ LVLAS
Sbjct: 434  DPTGQLLASCSDDITAKIWSIKQEKYLHDLREHAKEIYTIRWSPTGQGTNNPNQPLVLAS 493

Query: 1378 ASFDSTIKLWAVESGSLLYSLNGHRDPVYTVAFSPNGEYLASGSLDRCVHIWSIKEAKIV 1557
            ASFDST+KLW VE G LL SLNGHRDPVY+VAFSPNGEYLASGSLDR +HIWS+KE KIV
Sbjct: 494  ASFDSTVKLWDVEQGKLLCSLNGHRDPVYSVAFSPNGEYLASGSLDRSMHIWSLKERKIV 553

Query: 1558 RTYTGNGGIFEVCWNKEGDKLAACFADNVVCVMDFRM 1668
            +TYTGNGGIFEVCWNKEGDK+AACFA+N VCV+DFRM
Sbjct: 554  KTYTGNGGIFEVCWNKEGDKIAACFANNTVCVLDFRM 590


>ref|XP_002306492.1| predicted protein [Populus trichocarpa] gi|222855941|gb|EEE93488.1|
            predicted protein [Populus trichocarpa]
          Length = 517

 Score =  660 bits (1703), Expect = 0.0
 Identities = 314/390 (80%), Positives = 343/390 (87%)
 Frame = +1

Query: 499  EHEENIAGPEPMEIEAVDISTSSTTIPCVIPASDVMILEGHASEVFACAWSPSGPLLASG 678
            EHE  + GPEPM     DIS +ST+  C IP+SDVMILEGH SEV ACAWSP G LLASG
Sbjct: 134  EHEREL-GPEPM-----DISITSTSQTCEIPSSDVMILEGHTSEVCACAWSPIGQLLASG 187

Query: 679  AGDSTARIWTIGDGPCSSNMQGGPLNSAVLKHSKGRTNEKSKDVTTLDWNGEGTFLATGS 858
            +GDSTARIWTI +G   S +Q  PLN  VLKH KGRTNEKSKDVTTLDWNGEGT LATGS
Sbjct: 188  SGDSTARIWTITEGTSRSGVQNDPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 247

Query: 859  YDGQARIWNRDGELVSTLNKHKGPIFSLKWNKKGDYLLSGSVDKTAIVWDVKTGEWKQQF 1038
            YDGQARIW+ DGEL +TL+KHKGPIF+LKWNKKGDYLL+GS DKTAIVWDV+  EWKQQF
Sbjct: 248  YDGQARIWSTDGELKTTLSKHKGPIFTLKWNKKGDYLLTGSCDKTAIVWDVRAEEWKQQF 307

Query: 1039 EFHSAPTLDVDWRNNVSFATCSTDTMIYVCKVGENRPIKTFAGHQGEVNAIKWDPTGSLL 1218
            EFHS PTLDVDWRNNVSFAT STD MIYVCKVGE RPIK+FAGHQGEVN +KWDPTGSLL
Sbjct: 308  EFHSGPTLDVDWRNNVSFATSSTDNMIYVCKVGETRPIKSFAGHQGEVNCVKWDPTGSLL 367

Query: 1219 ASCSDDSTAKIWSMKQDTCLHDLKEHGKEIYTIKWSPTGPGTNNPNQQLVLASASFDSTI 1398
            ASCSDD +AKIWSMKQD  +HDL+EH KEIYTI+WSPTGPGTNNPNQQLVLASASFDST+
Sbjct: 368  ASCSDDISAKIWSMKQDKYVHDLREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFDSTV 427

Query: 1399 KLWAVESGSLLYSLNGHRDPVYTVAFSPNGEYLASGSLDRCVHIWSIKEAKIVRTYTGNG 1578
            KLW VE G LL SLNGHR+PVY+VAFSPNGEYLASGSLDRC++IWS+KE KIV+TYTGNG
Sbjct: 428  KLWDVEFGKLLSSLNGHREPVYSVAFSPNGEYLASGSLDRCINIWSLKEGKIVKTYTGNG 487

Query: 1579 GIFEVCWNKEGDKLAACFADNVVCVMDFRM 1668
            GIFEVCWNKEGDK+AACFA+N VCV+DFRM
Sbjct: 488  GIFEVCWNKEGDKIAACFANNTVCVLDFRM 517


>emb|CBI33743.3| unnamed protein product [Vitis vinifera]
          Length = 725

 Score =  660 bits (1702), Expect = 0.0
 Identities = 312/383 (81%), Positives = 339/383 (88%)
 Frame = +1

Query: 520  GPEPMEIEAVDISTSSTTIPCVIPASDVMILEGHASEVFACAWSPSGPLLASGAGDSTAR 699
            GPEPM     DISTSST   C IP+SDV ILEGH SEV ACAWSP+G LLASG+GDSTAR
Sbjct: 348  GPEPM-----DISTSSTFQACEIPSSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTAR 402

Query: 700  IWTIGDGPCSSNMQGGPLNSAVLKHSKGRTNEKSKDVTTLDWNGEGTFLATGSYDGQARI 879
            IWTI DG C S++Q GP N  VLKH KGRTNEKSKDVTTLDWNG+GT LATGSYDGQARI
Sbjct: 403  IWTIADGTCRSSVQNGPSNVLVLKHVKGRTNEKSKDVTTLDWNGDGTLLATGSYDGQARI 462

Query: 880  WNRDGELVSTLNKHKGPIFSLKWNKKGDYLLSGSVDKTAIVWDVKTGEWKQQFEFHSAPT 1059
            W+ +GEL STL+KHKGPIFSLKWN+KGDYLL+GS DKTAIVWDVKT EWKQQFEFH+ PT
Sbjct: 463  WSTNGELRSTLSKHKGPIFSLKWNRKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHAGPT 522

Query: 1060 LDVDWRNNVSFATCSTDTMIYVCKVGENRPIKTFAGHQGEVNAIKWDPTGSLLASCSDDS 1239
            LDVDWRNNVSFAT STD MIYVCK+GENRPIKTF+GHQGEVN +KWDPTG LLASCSDD 
Sbjct: 523  LDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFSGHQGEVNCVKWDPTGQLLASCSDDI 582

Query: 1240 TAKIWSMKQDTCLHDLKEHGKEIYTIKWSPTGPGTNNPNQQLVLASASFDSTIKLWAVES 1419
            TAKIWS+KQ+  LHDL+EH KEIYTI+WSPTG GTNNPNQ LVLASASFDST+KLW VE 
Sbjct: 583  TAKIWSIKQEKYLHDLREHAKEIYTIRWSPTGQGTNNPNQPLVLASASFDSTVKLWDVEQ 642

Query: 1420 GSLLYSLNGHRDPVYTVAFSPNGEYLASGSLDRCVHIWSIKEAKIVRTYTGNGGIFEVCW 1599
            G LL SLNGHRDPVY+VAFSPNGEYLASGSLDR +HIWS+KE KIV+TYTGNGGIFEVCW
Sbjct: 643  GKLLCSLNGHRDPVYSVAFSPNGEYLASGSLDRSMHIWSLKERKIVKTYTGNGGIFEVCW 702

Query: 1600 NKEGDKLAACFADNVVCVMDFRM 1668
            NKEGDK+AACFA+N VCV+DFRM
Sbjct: 703  NKEGDKIAACFANNTVCVLDFRM 725


>ref|XP_002524944.1| Polyadenylation factor subunit, putative [Ricinus communis]
            gi|223535779|gb|EEF37441.1| Polyadenylation factor
            subunit, putative [Ricinus communis]
          Length = 582

 Score =  657 bits (1696), Expect = 0.0
 Identities = 310/393 (78%), Positives = 343/393 (87%), Gaps = 1/393 (0%)
 Frame = +1

Query: 493  NIEHEEN-IAGPEPMEIEAVDISTSSTTIPCVIPASDVMILEGHASEVFACAWSPSGPLL 669
            N++HEEN   GPEPM     D+S +ST+  C IP+SDVMILEGH SEV ACAWSP+G LL
Sbjct: 195  NVKHEENGTGGPEPM-----DVSVTSTSQACEIPSSDVMILEGHTSEVCACAWSPTGSLL 249

Query: 670  ASGAGDSTARIWTIGDGPCSSNMQGGPLNSAVLKHSKGRTNEKSKDVTTLDWNGEGTFLA 849
            ASG+GDSTARIW I +G   S +Q GPLN  VLKH KGRTNEKSKDVTTLDWNGEGT LA
Sbjct: 250  ASGSGDSTARIWAIAEGTSRSGVQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA 309

Query: 850  TGSYDGQARIWNRDGELVSTLNKHKGPIFSLKWNKKGDYLLSGSVDKTAIVWDVKTGEWK 1029
            TGSYDGQARIWN  GEL +TL+KHKGPIFSLKWNKKGD+LL+GS DKTAIVWDVKT EWK
Sbjct: 310  TGSYDGQARIWNTSGELKTTLSKHKGPIFSLKWNKKGDFLLTGSCDKTAIVWDVKTEEWK 369

Query: 1030 QQFEFHSAPTLDVDWRNNVSFATCSTDTMIYVCKVGENRPIKTFAGHQGEVNAIKWDPTG 1209
            QQFEFHS P LDVDWRNN SFAT STD MIYVC+VG+NRP+KTFAGHQGEVN +KWDPTG
Sbjct: 370  QQFEFHSGPILDVDWRNNTSFATSSTDNMIYVCRVGDNRPVKTFAGHQGEVNCVKWDPTG 429

Query: 1210 SLLASCSDDSTAKIWSMKQDTCLHDLKEHGKEIYTIKWSPTGPGTNNPNQQLVLASASFD 1389
            SLLASCSDD +AKIWSMKQD  +HDL+EH KEIYTI+WSPTGPGTNNPNQQLVLASASFD
Sbjct: 430  SLLASCSDDISAKIWSMKQDKYVHDLREHSKEIYTIRWSPTGPGTNNPNQQLVLASASFD 489

Query: 1390 STIKLWAVESGSLLYSLNGHRDPVYTVAFSPNGEYLASGSLDRCVHIWSIKEAKIVRTYT 1569
            ST+KLW VE G LL +L+GHRDPVY+VAFSPNGEYLASGSLDR ++IWS+KE KIV+TYT
Sbjct: 490  STVKLWDVELGKLLCTLSGHRDPVYSVAFSPNGEYLASGSLDRSINIWSLKEVKIVKTYT 549

Query: 1570 GNGGIFEVCWNKEGDKLAACFADNVVCVMDFRM 1668
            G GGIFEVCWNKEGDK+AACFA+N VCV+D RM
Sbjct: 550  GQGGIFEVCWNKEGDKIAACFANNTVCVLDLRM 582


>ref|XP_002332225.1| predicted protein [Populus trichocarpa] gi|222831838|gb|EEE70315.1|
            predicted protein [Populus trichocarpa]
          Length = 532

 Score =  654 bits (1688), Expect = 0.0
 Identities = 309/383 (80%), Positives = 338/383 (88%)
 Frame = +1

Query: 520  GPEPMEIEAVDISTSSTTIPCVIPASDVMILEGHASEVFACAWSPSGPLLASGAGDSTAR 699
            GPEPM     DIST+ST+  C IP+SDVMILEGH SEV ACAWSP+G LLASG+GDSTAR
Sbjct: 155  GPEPM-----DISTASTSQTCEIPSSDVMILEGHTSEVCACAWSPTGSLLASGSGDSTAR 209

Query: 700  IWTIGDGPCSSNMQGGPLNSAVLKHSKGRTNEKSKDVTTLDWNGEGTFLATGSYDGQARI 879
            IWTI +G   S  Q GPLN  VLKH KGRTNEKSKDVTTLDWNGEGT LATGSYDGQARI
Sbjct: 210  IWTIAEGTSRSVAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARI 269

Query: 880  WNRDGELVSTLNKHKGPIFSLKWNKKGDYLLSGSVDKTAIVWDVKTGEWKQQFEFHSAPT 1059
            W+ DGEL +TL+KHKGPIF+LKWNKKGDYLL+GS DKTAIVWDV+  EWKQQFEFHS PT
Sbjct: 270  WSTDGELKTTLSKHKGPIFTLKWNKKGDYLLTGSCDKTAIVWDVRAEEWKQQFEFHSGPT 329

Query: 1060 LDVDWRNNVSFATCSTDTMIYVCKVGENRPIKTFAGHQGEVNAIKWDPTGSLLASCSDDS 1239
            LDVDWRNNVSFAT STD MIYVCKVGE RPIKTFAGHQGEVN +KWDPTGS LASCSDD 
Sbjct: 330  LDVDWRNNVSFATSSTDNMIYVCKVGETRPIKTFAGHQGEVNCVKWDPTGSWLASCSDDI 389

Query: 1240 TAKIWSMKQDTCLHDLKEHGKEIYTIKWSPTGPGTNNPNQQLVLASASFDSTIKLWAVES 1419
            +AKIWSMKQ+  +HDL+EH KEIYTI+WSPTGPGTNNPNQ LVLASASFDST+KLW VE 
Sbjct: 390  SAKIWSMKQEKYVHDLREHSKEIYTIRWSPTGPGTNNPNQPLVLASASFDSTVKLWDVEF 449

Query: 1420 GSLLYSLNGHRDPVYTVAFSPNGEYLASGSLDRCVHIWSIKEAKIVRTYTGNGGIFEVCW 1599
            G LL SLNGHR+PVY+VAFSPNGEYLASGSLDRC++IWS++E KIV+TY GNGGIFEVCW
Sbjct: 450  GKLLCSLNGHREPVYSVAFSPNGEYLASGSLDRCINIWSLREGKIVKTYAGNGGIFEVCW 509

Query: 1600 NKEGDKLAACFADNVVCVMDFRM 1668
            NKEGDK+AACFA+N VCV+DFRM
Sbjct: 510  NKEGDKIAACFANNTVCVLDFRM 532


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