BLASTX nr result

ID: Panax21_contig00002075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002075
         (853 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606385.1| 60S ribosomal protein L12 [Medicago truncatu...   219   5e-55
ref|XP_002281255.1| PREDICTED: 60S ribosomal protein L12 [Vitis ...   218   1e-54
gb|AFK45138.1| unknown [Medicago truncatula]                          217   2e-54
gb|ADR71265.1| 60S ribosomal protein L12A [Hevea brasiliensis]        216   4e-54
ref|XP_004137822.1| PREDICTED: 60S ribosomal protein L12-1-like ...   216   5e-54

>ref|XP_003606385.1| 60S ribosomal protein L12 [Medicago truncatula]
           gi|217071520|gb|ACJ84120.1| unknown [Medicago
           truncatula] gi|217075190|gb|ACJ85955.1| unknown
           [Medicago truncatula] gi|355507440|gb|AES88582.1| 60S
           ribosomal protein L12 [Medicago truncatula]
           gi|388514003|gb|AFK45063.1| unknown [Medicago
           truncatula]
          Length = 166

 Score =  219 bits (559), Expect = 5e-55
 Identities = 109/118 (92%), Positives = 116/118 (98%)
 Frame = +1

Query: 1   ETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHTGNISLD 180
           ETAKDWKGLRVTVKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKKTKNIKH GNISLD
Sbjct: 49  ETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLD 108

Query: 181 DVIEIAKIMRPRSMAKELTGTVKEILGTCVSVGCSVDGKNPKDVQEEIDDGDVEIPQD 354
           DVIEIAKIM+PRSMAKEL GTVKEILGTCVSVGC+VDGK+PKD+Q+EI+DGDVEIPQD
Sbjct: 109 DVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEIPQD 166


>ref|XP_002281255.1| PREDICTED: 60S ribosomal protein L12 [Vitis vinifera]
           gi|147835636|emb|CAN66258.1| hypothetical protein
           VITISV_001237 [Vitis vinifera]
          Length = 166

 Score =  218 bits (556), Expect = 1e-54
 Identities = 109/118 (92%), Positives = 116/118 (98%)
 Frame = +1

Query: 1   ETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHTGNISLD 180
           ETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKH GNISLD
Sbjct: 49  ETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLD 108

Query: 181 DVIEIAKIMRPRSMAKELTGTVKEILGTCVSVGCSVDGKNPKDVQEEIDDGDVEIPQD 354
           DVIEIAKIMRPRSMAK+L+G+VKEILGTCVSVGC+VDGK+PKD+Q+EI DGDVEIPQD
Sbjct: 109 DVIEIAKIMRPRSMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEIADGDVEIPQD 166


>gb|AFK45138.1| unknown [Medicago truncatula]
          Length = 166

 Score =  217 bits (553), Expect = 2e-54
 Identities = 108/116 (93%), Positives = 114/116 (98%)
 Frame = +1

Query: 1   ETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHTGNISLD 180
           ETAKDWKGLRVTVKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKKTKNIKH GNISLD
Sbjct: 49  ETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLD 108

Query: 181 DVIEIAKIMRPRSMAKELTGTVKEILGTCVSVGCSVDGKNPKDVQEEIDDGDVEIP 348
           DVIEIAKIM+PRSMAKEL GTVKEILGTCVSVGC+VDGK+PKD+Q+EIDDGDVEIP
Sbjct: 109 DVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGKDPKDLQQEIDDGDVEIP 164


>gb|ADR71265.1| 60S ribosomal protein L12A [Hevea brasiliensis]
          Length = 166

 Score =  216 bits (551), Expect = 4e-54
 Identities = 106/118 (89%), Positives = 116/118 (98%)
 Frame = +1

Query: 1   ETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHTGNISLD 180
           ETAKDWKGLRVTVKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKKTKNIKH+GNISLD
Sbjct: 49  ETAKDWKGLRVTVKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKTKNIKHSGNISLD 108

Query: 181 DVIEIAKIMRPRSMAKELTGTVKEILGTCVSVGCSVDGKNPKDVQEEIDDGDVEIPQD 354
           DVIEIAK+MRPRSMAK+L+GTVKEILGTCVSVGC+VDGKNPKD+Q+EI DG+VE+P D
Sbjct: 109 DVIEIAKVMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKNPKDLQQEITDGEVEVPLD 166


>ref|XP_004137822.1| PREDICTED: 60S ribosomal protein L12-1-like [Cucumis sativus]
           gi|449513637|ref|XP_004164383.1| PREDICTED: 60S
           ribosomal protein L12-1-like [Cucumis sativus]
          Length = 166

 Score =  216 bits (550), Expect = 5e-54
 Identities = 106/118 (89%), Positives = 116/118 (98%)
 Frame = +1

Query: 1   ETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHTGNISLD 180
           ETAK+WKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKH GNISLD
Sbjct: 49  ETAKEWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLD 108

Query: 181 DVIEIAKIMRPRSMAKELTGTVKEILGTCVSVGCSVDGKNPKDVQEEIDDGDVEIPQD 354
           DVIEIA++MRPRSMAK+L+G+VKEILGTCVSVGC+VDGK+PKD+Q+EI DGDVEIPQD
Sbjct: 109 DVIEIARVMRPRSMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEISDGDVEIPQD 166


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