BLASTX nr result

ID: Panax21_contig00002069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002069
         (1227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264...   100   1e-18
ref|XP_002285249.1| PREDICTED: EIN3-binding F-box protein 1-like...    97   6e-18
emb|CAN83761.1| hypothetical protein VITISV_043743 [Vitis vinifera]    97   6e-18
ref|NP_001234858.1| EIN3-binding F-box protein 1 [Solanum lycope...    96   2e-17
ref|XP_002325221.1| f-box family protein [Populus trichocarpa] g...    96   2e-17

>ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264243 [Vitis vinifera]
          Length = 1671

 Score = 99.8 bits (247), Expect = 1e-18
 Identities = 104/377 (27%), Positives = 167/377 (44%), Gaps = 62/377 (16%)
 Frame = +1

Query: 214  KASCCL*PQHHEEGISISNFLTXXXXXXXXXXXXNFLKNSTSSGSHSNANARLKLTTATS 393
            K S  + PQ H +G  +   L               ++ + +SG  S+A+    L++ TS
Sbjct: 433  KPSHSMQPQVHNQGQQLPVPLAPNQSQTRQQLLAQNIQTNIASGVPSSASLPSTLSSVTS 492

Query: 394  SSQT-LPNTFDQNSMLQSTL---QNPV------------------DSQQLQQVVPRHNEQ 507
             +QT + N   QNS +Q+     QN V                   SQ   QVVP+  +Q
Sbjct: 493  LNQTPMQNVVGQNSGMQNISGIPQNSVGNSMGQGVPSNMFANSQRQSQGRPQVVPQQQQQ 552

Query: 508  QPQISHQNTCNQELQHNQLQQTRMKEQRIEHTHMVSSA--EKQTSITQASSPVNAMRTAP 681
            Q Q S Q    Q+LQH+ L+Q + ++Q+ + T + S+     Q S+ Q SS    M++AP
Sbjct: 553  QSQSSQQYIYQQQLQHHLLKQ-KYQQQQQQQTLLQSNQFQSSQQSVMQTSS---GMQSAP 608

Query: 682  SLNLTHNQQCSVHQS---VSEENPLLVLRIXXXXXXXXXXXXKRASVPQRTL--AQQKQQ 846
               L  NQ  SV QS   V +++P  VLR             ++ S+ Q+ +  +QQ+QQ
Sbjct: 609  LSGLQQNQPSSVQQSSQSVLQQHPPAVLRQQQQPQQTPVMHQQQTSMTQQPILPSQQQQQ 668

Query: 847  LVRQLPICNNIEQDHQNRQQKGVTDAHQQQQ---------------------------VL 945
            L+ Q P    ++ +    QQ   +D  QQQQ                           + 
Sbjct: 669  LIGQPPNATTMQSNQLIGQQNSFSDLQQQQQQQQQRLLSQQNNLPNLQQQQQQQQHQLMA 728

Query: 946  VWNHHSSTQARQLGQQRNYPRLRGAQSCISS-SGN-----EEQNAYMLQQDDVAAQHQPE 1107
              ++ S+   +QLG Q N   L+  Q  + + SGN      +   ++LQQ  V  Q Q +
Sbjct: 729  QQSNLSNIHQQQLGHQSNVSALQQQQQMLGTQSGNPSMQTNQHPVHILQQSKVPVQQQTQ 788

Query: 1108 QIMATLLPTKGKKSEPQ 1158
            Q ++ LL T+G++S+ Q
Sbjct: 789  QGVSNLLATQGQQSQQQ 805


>ref|XP_002285249.1| PREDICTED: EIN3-binding F-box protein 1-like [Vitis vinifera]
          Length = 661

 Score = 97.4 bits (241), Expect = 6e-18
 Identities = 46/57 (80%), Positives = 51/57 (89%)
 Frame = +2

Query: 5   ISNKGVVAIAENCPNLTALTIESCTKIGNVSLQAIGRCCPKLQSITIKDCALVGDQG 175
           IS+KG++AIA+NCPNLTALTIESC  IGN SLQAIG  CPKLQSI+IKDC LVGDQG
Sbjct: 246 ISDKGLIAIAKNCPNLTALTIESCANIGNESLQAIGSLCPKLQSISIKDCPLVGDQG 302


>emb|CAN83761.1| hypothetical protein VITISV_043743 [Vitis vinifera]
          Length = 669

 Score = 97.4 bits (241), Expect = 6e-18
 Identities = 46/57 (80%), Positives = 51/57 (89%)
 Frame = +2

Query: 5   ISNKGVVAIAENCPNLTALTIESCTKIGNVSLQAIGRCCPKLQSITIKDCALVGDQG 175
           IS+KG++AIA+NCPNLTALTIESC  IGN SLQAIG  CPKLQSI+IKDC LVGDQG
Sbjct: 223 ISDKGLIAIAKNCPNLTALTIESCANIGNESLQAIGSLCPKLQSISIKDCPLVGDQG 279


>ref|NP_001234858.1| EIN3-binding F-box protein 1 [Solanum lycopersicum]
           gi|82734614|gb|ABB89717.1| EIN3-binding F-box protein 1
           [Solanum lycopersicum] gi|83584402|gb|ABC24971.1|
           EIN3-binding F-box protein 1 [Solanum lycopersicum]
           gi|240017777|gb|ACS44350.1| EIN3-binding F-box protein 2
           [Solanum lycopersicum]
          Length = 637

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 45/58 (77%), Positives = 51/58 (87%)
 Frame = +2

Query: 2   SISNKGVVAIAENCPNLTALTIESCTKIGNVSLQAIGRCCPKLQSITIKDCALVGDQG 175
           SISNKG+VAIAENCP+LT+LTIESC  IGN  LQA+G+ C KLQS+TIKDC LVGDQG
Sbjct: 224 SISNKGLVAIAENCPSLTSLTIESCPNIGNEGLQAVGKYCTKLQSLTIKDCPLVGDQG 281


>ref|XP_002325221.1| f-box family protein [Populus trichocarpa]
           gi|222866655|gb|EEF03786.1| f-box family protein
           [Populus trichocarpa]
          Length = 632

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 43/58 (74%), Positives = 51/58 (87%)
 Frame = +2

Query: 2   SISNKGVVAIAENCPNLTALTIESCTKIGNVSLQAIGRCCPKLQSITIKDCALVGDQG 175
           SISNKG++A+AENCPNL++L IESC+KIGN  LQ IG+ CPKLQSI+IKDC LVGD G
Sbjct: 216 SISNKGLIAVAENCPNLSSLNIESCSKIGNEGLQTIGKLCPKLQSISIKDCPLVGDHG 273


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