BLASTX nr result

ID: Panax21_contig00002066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002066
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269412.2| PREDICTED: uncharacterized protein LOC100254...   114   6e-24
emb|CAN74679.1| hypothetical protein VITISV_006858 [Vitis vinifera]   114   6e-24
ref|XP_002520661.1| hypothetical protein RCOM_0555330 [Ricinus c...    77   2e-12
ref|XP_002321024.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
gb|ADV56699.1| CW-type zinc finger protein [Phaseolus vulgaris]        59   3e-07

>ref|XP_002269412.2| PREDICTED: uncharacterized protein LOC100254466 [Vitis vinifera]
          Length = 1730

 Score =  114 bits (286), Expect = 6e-24
 Identities = 64/137 (46%), Positives = 83/137 (60%), Gaps = 5/137 (3%)
 Frame = -1

Query: 402  SPLRVFNPDKITSARRNLGGNSDFQDMVSLATTSPRKCSDGEDCGGSDRSGMVRKDATIT 223
            SPLR+ NP+K TS RRNL G  D +D V     SPR+CSDGED GGS+RSG +RK+   T
Sbjct: 1107 SPLRISNPEKHTSVRRNLMGKDDSRD-VGFFAMSPRRCSDGEDDGGSERSGAMRKNKIFT 1165

Query: 222  AINRGSVECSGHDFQDKGLAHISSRKAVAKPVHSPEFETLHV----TDTL-QGERYSCKP 58
              +RGS++ S  DFQ++  +H+S  K   +PV SPEF   H      DTL Q  RY  +P
Sbjct: 1166 VTHRGSLDSSVLDFQERDFSHLSGSKVQVQPVPSPEFTNRHFLDAGADTLGQVPRYPSEP 1225

Query: 57   LISGQCHNDESEKGNQY 7
              S +  N+E +  N Y
Sbjct: 1226 QASDRGRNEERKDNNHY 1242


>emb|CAN74679.1| hypothetical protein VITISV_006858 [Vitis vinifera]
          Length = 1671

 Score =  114 bits (286), Expect = 6e-24
 Identities = 64/137 (46%), Positives = 83/137 (60%), Gaps = 5/137 (3%)
 Frame = -1

Query: 402  SPLRVFNPDKITSARRNLGGNSDFQDMVSLATTSPRKCSDGEDCGGSDRSGMVRKDATIT 223
            SPLR+ NP+K TS RRNL G  D +D V     SPR+CSDGED GGS+RSG +RK+   T
Sbjct: 1097 SPLRISNPEKHTSVRRNLMGKDDSRD-VGFFAMSPRRCSDGEDDGGSERSGAMRKNKIFT 1155

Query: 222  AINRGSVECSGHDFQDKGLAHISSRKAVAKPVHSPEFETLHV----TDTL-QGERYSCKP 58
              +RGS++ S  DFQ++  +H+S  K   +PV SPEF   H      DTL Q  RY  +P
Sbjct: 1156 VTHRGSLDSSVLDFQERDFSHLSGSKVQVQPVPSPEFTNRHFLDAGADTLGQVPRYPSEP 1215

Query: 57   LISGQCHNDESEKGNQY 7
              S +  N+E +  N Y
Sbjct: 1216 QASDRGRNEERKDNNHY 1232


>ref|XP_002520661.1| hypothetical protein RCOM_0555330 [Ricinus communis]
            gi|223540046|gb|EEF41623.1| hypothetical protein
            RCOM_0555330 [Ricinus communis]
          Length = 1670

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 50/137 (36%), Positives = 69/137 (50%), Gaps = 5/137 (3%)
 Frame = -1

Query: 402  SPLRVFNPDKITSARRNLGGNSDFQDMVSLATTSPRKCSDGEDCGGSDRSGMVRKDATIT 223
            SPLRV   DK+ S +RN     D  D    +    RK SDGED GGSDRSG  +K+  + 
Sbjct: 1072 SPLRVSKQDKLMSGQRNFTEKDDSSDAGLFSLGGRRKISDGEDDGGSDRSGAAKKEKVLE 1131

Query: 222  AINRGSVECSGHDFQDKGLAHISSRKAVAKPVHSPEFETLHV----TDTL-QGERYSCKP 58
              +  S E S  DFQ+K ++ +S  K   + V SP+    H+    +D L Q  R S K 
Sbjct: 1132 VAHHASHESSVLDFQEKDISRVSGGKFKQQIVPSPDITNHHLANGSSDYLGQENRCSSKT 1191

Query: 57   LISGQCHNDESEKGNQY 7
              S + H D+ +  + Y
Sbjct: 1192 TTSERGHVDDRQHESHY 1208


>ref|XP_002321024.1| predicted protein [Populus trichocarpa] gi|222861797|gb|EEE99339.1|
           predicted protein [Populus trichocarpa]
          Length = 708

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
 Frame = -1

Query: 402 SPLRVFNPDKITSARRNLGGNSDFQDMVSLATTSPRKCSDGEDCGGSDRSGMVRKDATIT 223
           SP+RV  P+K+ SAR+N+       D    A   PR+ SDGED GG+D+SG  RK  T+ 
Sbjct: 196 SPMRVSKPEKLASARKNVTKKDASVDAGFFAPGGPRRFSDGEDDGGNDQSGTARKAKTLV 255

Query: 222 AINRGSVECSGH-----DFQDKGLAHISSRKAVAKPVHSPE 115
            I        GH     DF  +   H  S+ A   P H  E
Sbjct: 256 HIVPSPDIADGHLSNDVDFLSQNTPH-RSKPAALDPCHDNE 295


>gb|ADV56699.1| CW-type zinc finger protein [Phaseolus vulgaris]
          Length = 1605

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/92 (35%), Positives = 53/92 (57%)
 Frame = -1

Query: 402  SPLRVFNPDKITSARRNLGGNSDFQDMVSLATTSPRKCSDGEDCGGSDRSGMVRKDATIT 223
            SP+R+ N DK ++  + + G  D  ++      SPR+CS+ ++ GG DRSG  RK+ ++T
Sbjct: 967  SPIRISNADKFSN--KEITGKDDSHEIA--VVDSPRRCSNRDNDGGIDRSGTARKEKSLT 1022

Query: 222  AINRGSVECSGHDFQDKGLAHISSRKAVAKPV 127
              NR        DFQDKG+ ++S  K  A+ +
Sbjct: 1023 VANR-------PDFQDKGVNYMSDTKIKAETI 1047


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