BLASTX nr result

ID: Panax21_contig00002063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002063
         (2042 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29257.3| unnamed protein product [Vitis vinifera]              105   3e-22
ref|XP_002267714.2| PREDICTED: protein MEI2-like 4-like [Vitis v...   105   3e-22
emb|CAN72509.1| hypothetical protein VITISV_040729 [Vitis vinifera]   105   3e-22
ref|NP_001234547.1| AML1 [Solanum lycopersicum] gi|47834703|gb|A...    89   1e-16
ref|XP_002304641.1| predicted protein [Populus trichocarpa] gi|2...    77   5e-14

>emb|CBI29257.3| unnamed protein product [Vitis vinifera]
          Length = 986

 Score =  105 bits (261), Expect(2) = 3e-22
 Identities = 58/124 (46%), Positives = 73/124 (58%)
 Frame = -1

Query: 854 FTGTTSHGKITSCSIDDGTIVGVQSSTGAPISRYLDNPFHHGIXXXXXXXXXXXXXVEAV 675
           F G  S G ITS S+++GTI+GV S    PI  +L+N  HHGI             VE+V
Sbjct: 465 FPGPASLGAITSSSMENGTIMGVHSGIPFPIRPFLENVSHHGISSSVPNTLPSLLSVESV 524

Query: 674 GNQSSVADSGQSSDQLKFKLLNTPNFYPHSLPNYHDNFGNVTPCISQGNMAANISVSPSE 495
           G+QS +A+S +S  QLKF    T + +PHSLP Y+D   N  PC   G MAANI+  P E
Sbjct: 525 GSQSGLAESSRSQGQLKFDFRGTQSLHPHSLPEYNDGLANGAPCNPVGTMAANINPRP-E 583

Query: 494 RIEN 483
           RIEN
Sbjct: 584 RIEN 587



 Score = 28.5 bits (62), Expect(2) = 3e-22
 Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
 Frame = -2

Query: 925 LMQSF-SELEQDELSPYLQQSSSNN 854
           LMQ F SELE+DE   YLQQ+++ N
Sbjct: 435 LMQQFPSELEEDESGLYLQQNNTPN 459


>ref|XP_002267714.2| PREDICTED: protein MEI2-like 4-like [Vitis vinifera]
          Length = 965

 Score =  105 bits (261), Expect(2) = 3e-22
 Identities = 58/124 (46%), Positives = 73/124 (58%)
 Frame = -1

Query: 854 FTGTTSHGKITSCSIDDGTIVGVQSSTGAPISRYLDNPFHHGIXXXXXXXXXXXXXVEAV 675
           F G  S G ITS S+++GTI+GV S    PI  +L+N  HHGI             VE+V
Sbjct: 444 FPGPASLGAITSSSMENGTIMGVHSGIPFPIRPFLENVSHHGISSSVPNTLPSLLSVESV 503

Query: 674 GNQSSVADSGQSSDQLKFKLLNTPNFYPHSLPNYHDNFGNVTPCISQGNMAANISVSPSE 495
           G+QS +A+S +S  QLKF    T + +PHSLP Y+D   N  PC   G MAANI+  P E
Sbjct: 504 GSQSGLAESSRSQGQLKFDFRGTQSLHPHSLPEYNDGLANGAPCNPVGTMAANINPRP-E 562

Query: 494 RIEN 483
           RIEN
Sbjct: 563 RIEN 566



 Score = 28.5 bits (62), Expect(2) = 3e-22
 Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
 Frame = -2

Query: 925 LMQSF-SELEQDELSPYLQQSSSNN 854
           LMQ F SELE+DE   YLQQ+++ N
Sbjct: 414 LMQQFPSELEEDESGLYLQQNNTPN 438


>emb|CAN72509.1| hypothetical protein VITISV_040729 [Vitis vinifera]
          Length = 932

 Score =  105 bits (261), Expect(2) = 3e-22
 Identities = 58/123 (47%), Positives = 73/123 (59%)
 Frame = -1

Query: 851 TGTTSHGKITSCSIDDGTIVGVQSSTGAPISRYLDNPFHHGIXXXXXXXXXXXXXVEAVG 672
           TG  S G ITS S+++GTI+GV S    PI  +L+N  HHGI             VE+VG
Sbjct: 423 TGPASLGAITSSSMENGTIMGVHSGIPFPIRPFLENVSHHGISSSVPNTLPSLLSVESVG 482

Query: 671 NQSSVADSGQSSDQLKFKLLNTPNFYPHSLPNYHDNFGNVTPCISQGNMAANISVSPSER 492
           +QS +A+S +S  QLKF    T + +PHSLP Y+D   N  PC   G MAANI+  P ER
Sbjct: 483 SQSGLAESSRSQGQLKFDFRGTQSLHPHSLPEYNDGLANGAPCNPVGTMAANINPRP-ER 541

Query: 491 IEN 483
           IEN
Sbjct: 542 IEN 544



 Score = 28.5 bits (62), Expect(2) = 3e-22
 Identities = 15/25 (60%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
 Frame = -2

Query: 925 LMQSF-SELEQDELSPYLQQSSSNN 854
           LMQ F SELE+DE   YLQQ+++ N
Sbjct: 388 LMQQFPSELEEDESGLYLQQNNTPN 412


>ref|NP_001234547.1| AML1 [Solanum lycopersicum] gi|47834703|gb|AAT39005.1| AML1
           [Solanum lycopersicum]
          Length = 971

 Score = 88.6 bits (218), Expect(2) = 1e-16
 Identities = 48/128 (37%), Positives = 71/128 (55%)
 Frame = -1

Query: 854 FTGTTSHGKITSCSIDDGTIVGVQSSTGAPISRYLDNPFHHGIXXXXXXXXXXXXXVEAV 675
           F+G   HG     S+++G+I+G QS++G+ ++ YLDN F  G+                 
Sbjct: 466 FSGALPHGG-HGLSMENGSILGRQSASGSAMNSYLDNAFDCGLSFSVPNSLLRLESKG-- 522

Query: 674 GNQSSVADSGQSSDQLKFKLLNTPNFYPHSLPNYHDNFGNVTPCISQGNMAANISVSPSE 495
           GNQ++V ++G    Q  F L  T   +PHSLP YHD   N T  IS G ++AN+++ P E
Sbjct: 523 GNQANVGETGHLQSQFNFDLRGTSGLHPHSLPEYHDGLSNGTTSISPGGISANMNIRPLE 582

Query: 494 RIEN*KYS 471
            IEN K+S
Sbjct: 583 AIENRKFS 590



 Score = 26.2 bits (56), Expect(2) = 1e-16
 Identities = 15/26 (57%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = -2

Query: 925 LMQSF-SELEQDELSPYLQQSSSNNL 851
           L Q F SELEQDE   YL Q+S ++L
Sbjct: 437 LSQQFPSELEQDEPGLYLHQNSPSSL 462


>ref|XP_002304641.1| predicted protein [Populus trichocarpa] gi|222842073|gb|EEE79620.1|
           predicted protein [Populus trichocarpa]
          Length = 976

 Score = 77.4 bits (189), Expect(2) = 5e-14
 Identities = 46/120 (38%), Positives = 63/120 (52%)
 Frame = -1

Query: 845 TTSHGKITSCSIDDGTIVGVQSSTGAPISRYLDNPFHHGIXXXXXXXXXXXXXVEAVGNQ 666
           T   G + S  +D+G I+G  S+T AP   + ++  HHGI             VE+ GNQ
Sbjct: 470 TEFSGTVISTGMDNGPILGAHSATQAP---FFESALHHGISSSVPNSMSSLSRVESAGNQ 526

Query: 665 SSVADSGQSSDQLKFKLLNTPNFYPHSLPNYHDNFGNVTPCISQGNMAANISVSPSERIE 486
           +  A+   S   LKF + +T NF+PHSLP Y D   +   C S G MAANI+    ERI+
Sbjct: 527 TGFAELSHSPGHLKFDIQSTLNFHPHSLPEY-DGLNSGVHCNSPGAMAANINPRLLERID 585



 Score = 28.5 bits (62), Expect(2) = 5e-14
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = -2

Query: 907 ELEQDELSPYLQQSSSNN 854
           ELEQDE  P++QQSS  N
Sbjct: 449 ELEQDEFGPFVQQSSPPN 466


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