BLASTX nr result

ID: Panax21_contig00002041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002041
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618578.1| 30S ribosomal protein S28e [Medicago truncat...   103   1e-20
ref|XP_003520726.1| PREDICTED: 40S ribosomal protein S28-like [G...   100   9e-20
gb|AEC10961.1| ribosomal protein s28 [Camellia sinensis]              100   9e-20
ref|XP_002520788.1| ribosomal protein S28, putative [Ricinus com...   100   2e-19
ref|XP_004154925.1| PREDICTED: 40S ribosomal protein S28-like [C...   100   2e-19

>ref|XP_003618578.1| 30S ribosomal protein S28e [Medicago truncatula]
           gi|355493593|gb|AES74796.1| 30S ribosomal protein S28e
           [Medicago truncatula]
          Length = 75

 Score =  103 bits (257), Expect = 1e-20
 Identities = 49/56 (87%), Positives = 54/56 (96%)
 Frame = +3

Query: 60  KFRFRMESQLKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDV 227
           + R+RMESQ+KHA+VVKVMGRTGSRGQVTQVRVKFLDDQNR IMRNVKGPVREGD+
Sbjct: 6   EIRYRMESQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDI 61


>ref|XP_003520726.1| PREDICTED: 40S ribosomal protein S28-like [Glycine max]
          Length = 105

 Score =  100 bits (250), Expect = 9e-20
 Identities = 49/52 (94%), Positives = 51/52 (98%)
 Frame = +3

Query: 72  RMESQLKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDV 227
           RMESQ+KHALVVKVMGRTGSRGQVTQVRVKFLDDQNR IMRNVKGPVREGD+
Sbjct: 40  RMESQVKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDI 91


>gb|AEC10961.1| ribosomal protein s28 [Camellia sinensis]
          Length = 65

 Score =  100 bits (250), Expect = 9e-20
 Identities = 48/51 (94%), Positives = 51/51 (100%)
 Frame = +3

Query: 75  MESQLKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDV 227
           MESQ+KHA+VVKVMGRTGSRGQVTQVRVKF+DDQNRFIMRNVKGPVREGDV
Sbjct: 1   MESQIKHAIVVKVMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDV 51


>ref|XP_002520788.1| ribosomal protein S28, putative [Ricinus communis]
           gi|255581574|ref|XP_002531592.1| ribosomal protein S28,
           putative [Ricinus communis] gi|223528788|gb|EEF30795.1|
           ribosomal protein S28, putative [Ricinus communis]
           gi|223539919|gb|EEF41497.1| ribosomal protein S28,
           putative [Ricinus communis] gi|313586485|gb|ADR71253.1|
           40S ribosomal protein S28A [Hevea brasiliensis]
           gi|313586487|gb|ADR71254.1| 40S ribosomal protein S28B
           [Hevea brasiliensis]
          Length = 65

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/51 (94%), Positives = 51/51 (100%)
 Frame = +3

Query: 75  MESQLKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDV 227
           M+SQ+KHA+VVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDV
Sbjct: 1   MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDV 51


>ref|XP_004154925.1| PREDICTED: 40S ribosomal protein S28-like [Cucumis sativus]
          Length = 68

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 47/51 (92%), Positives = 51/51 (100%)
 Frame = +3

Query: 75  MESQLKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDV 227
           MESQ+KHA+VVKVMGRTGSRGQVTQVRVKFLDDQNR+IMRNVKGPVREGD+
Sbjct: 4   MESQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRYIMRNVKGPVREGDI 54


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