BLASTX nr result
ID: Panax21_contig00002041
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00002041 (509 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003618578.1| 30S ribosomal protein S28e [Medicago truncat... 103 1e-20 ref|XP_003520726.1| PREDICTED: 40S ribosomal protein S28-like [G... 100 9e-20 gb|AEC10961.1| ribosomal protein s28 [Camellia sinensis] 100 9e-20 ref|XP_002520788.1| ribosomal protein S28, putative [Ricinus com... 100 2e-19 ref|XP_004154925.1| PREDICTED: 40S ribosomal protein S28-like [C... 100 2e-19 >ref|XP_003618578.1| 30S ribosomal protein S28e [Medicago truncatula] gi|355493593|gb|AES74796.1| 30S ribosomal protein S28e [Medicago truncatula] Length = 75 Score = 103 bits (257), Expect = 1e-20 Identities = 49/56 (87%), Positives = 54/56 (96%) Frame = +3 Query: 60 KFRFRMESQLKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDV 227 + R+RMESQ+KHA+VVKVMGRTGSRGQVTQVRVKFLDDQNR IMRNVKGPVREGD+ Sbjct: 6 EIRYRMESQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDI 61 >ref|XP_003520726.1| PREDICTED: 40S ribosomal protein S28-like [Glycine max] Length = 105 Score = 100 bits (250), Expect = 9e-20 Identities = 49/52 (94%), Positives = 51/52 (98%) Frame = +3 Query: 72 RMESQLKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDV 227 RMESQ+KHALVVKVMGRTGSRGQVTQVRVKFLDDQNR IMRNVKGPVREGD+ Sbjct: 40 RMESQVKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDI 91 >gb|AEC10961.1| ribosomal protein s28 [Camellia sinensis] Length = 65 Score = 100 bits (250), Expect = 9e-20 Identities = 48/51 (94%), Positives = 51/51 (100%) Frame = +3 Query: 75 MESQLKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDV 227 MESQ+KHA+VVKVMGRTGSRGQVTQVRVKF+DDQNRFIMRNVKGPVREGDV Sbjct: 1 MESQIKHAIVVKVMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDV 51 >ref|XP_002520788.1| ribosomal protein S28, putative [Ricinus communis] gi|255581574|ref|XP_002531592.1| ribosomal protein S28, putative [Ricinus communis] gi|223528788|gb|EEF30795.1| ribosomal protein S28, putative [Ricinus communis] gi|223539919|gb|EEF41497.1| ribosomal protein S28, putative [Ricinus communis] gi|313586485|gb|ADR71253.1| 40S ribosomal protein S28A [Hevea brasiliensis] gi|313586487|gb|ADR71254.1| 40S ribosomal protein S28B [Hevea brasiliensis] Length = 65 Score = 100 bits (248), Expect = 2e-19 Identities = 48/51 (94%), Positives = 51/51 (100%) Frame = +3 Query: 75 MESQLKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDV 227 M+SQ+KHA+VVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDV Sbjct: 1 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDV 51 >ref|XP_004154925.1| PREDICTED: 40S ribosomal protein S28-like [Cucumis sativus] Length = 68 Score = 99.8 bits (247), Expect = 2e-19 Identities = 47/51 (92%), Positives = 51/51 (100%) Frame = +3 Query: 75 MESQLKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDV 227 MESQ+KHA+VVKVMGRTGSRGQVTQVRVKFLDDQNR+IMRNVKGPVREGD+ Sbjct: 4 MESQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRYIMRNVKGPVREGDI 54