BLASTX nr result

ID: Panax21_contig00002035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002035
         (958 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34696.3| unnamed protein product [Vitis vinifera]              610   e-172
ref|XP_002271357.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   610   e-172
emb|CBI40324.3| unnamed protein product [Vitis vinifera]              606   e-171
ref|XP_002270379.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   606   e-171
ref|XP_003528863.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   605   e-171

>emb|CBI34696.3| unnamed protein product [Vitis vinifera]
          Length = 438

 Score =  610 bits (1572), Expect = e-172
 Identities = 300/314 (95%), Positives = 312/314 (99%)
 Frame = -3

Query: 956  EDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDIVARAKNGTGKTAAFCIPALEKI 777
            EDYFLKRELLMGIYEKGFE+PSPIQEESIPIALTGSDI+ARAKNGTGKTAAFCIPALEKI
Sbjct: 67   EDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI 126

Query: 776  DPDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLL 597
            DPDNNVIQVVILVPTRELALQTSQVCKELGKHLKI+VMVTTGGTSLKDDIMRLYQPVHLL
Sbjct: 127  DPDNNVIQVVILVPTRELALQTSQVCKELGKHLKIEVMVTTGGTSLKDDIMRLYQPVHLL 186

Query: 596  VGTPGRILDLSKKGVCLLNDCAMLVMDEADKLLSPEFQPSLEELIDFLPQNRQILMFSAT 417
            VGTPGRILDLSKKG+C+L DC++LVMDEADKLLSPEFQPS+E+LI FLPQNRQILMFSAT
Sbjct: 187  VGTPGRILDLSKKGICILKDCSVLVMDEADKLLSPEFQPSVEQLIRFLPQNRQILMFSAT 246

Query: 416  FPVSVKDFKDRYLEKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSII 237
            FPV+VKDFKDRYL+KPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSII
Sbjct: 247  FPVTVKDFKDRYLKKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSII 306

Query: 236  FCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGID 57
            FCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGID
Sbjct: 307  FCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGID 366

Query: 56   IQAVNVVINFDFPR 15
            IQAVNVVINFDFP+
Sbjct: 367  IQAVNVVINFDFPK 380


>ref|XP_002271357.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8 [Vitis vinifera]
          Length = 480

 Score =  610 bits (1572), Expect = e-172
 Identities = 300/314 (95%), Positives = 312/314 (99%)
 Frame = -3

Query: 956  EDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDIVARAKNGTGKTAAFCIPALEKI 777
            EDYFLKRELLMGIYEKGFE+PSPIQEESIPIALTGSDI+ARAKNGTGKTAAFCIPALEKI
Sbjct: 109  EDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI 168

Query: 776  DPDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLL 597
            DPDNNVIQVVILVPTRELALQTSQVCKELGKHLKI+VMVTTGGTSLKDDIMRLYQPVHLL
Sbjct: 169  DPDNNVIQVVILVPTRELALQTSQVCKELGKHLKIEVMVTTGGTSLKDDIMRLYQPVHLL 228

Query: 596  VGTPGRILDLSKKGVCLLNDCAMLVMDEADKLLSPEFQPSLEELIDFLPQNRQILMFSAT 417
            VGTPGRILDLSKKG+C+L DC++LVMDEADKLLSPEFQPS+E+LI FLPQNRQILMFSAT
Sbjct: 229  VGTPGRILDLSKKGICILKDCSVLVMDEADKLLSPEFQPSVEQLIRFLPQNRQILMFSAT 288

Query: 416  FPVSVKDFKDRYLEKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSII 237
            FPV+VKDFKDRYL+KPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSII
Sbjct: 289  FPVTVKDFKDRYLKKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSII 348

Query: 236  FCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGID 57
            FCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGID
Sbjct: 349  FCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGID 408

Query: 56   IQAVNVVINFDFPR 15
            IQAVNVVINFDFP+
Sbjct: 409  IQAVNVVINFDFPK 422


>emb|CBI40324.3| unnamed protein product [Vitis vinifera]
          Length = 472

 Score =  606 bits (1562), Expect = e-171
 Identities = 298/314 (94%), Positives = 310/314 (98%)
 Frame = -3

Query: 956  EDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDIVARAKNGTGKTAAFCIPALEKI 777
            EDYFLKRELLMGIYEKGFE+PSPIQEESIPIALTGSDI+ARAKNGTGKTAAFCIPALEKI
Sbjct: 101  EDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI 160

Query: 776  DPDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLL 597
            D DNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLL
Sbjct: 161  DQDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLL 220

Query: 596  VGTPGRILDLSKKGVCLLNDCAMLVMDEADKLLSPEFQPSLEELIDFLPQNRQILMFSAT 417
            VGTPGRILDLSKKGVC+L DC+MLVMDEADKLLSPEFQPS+E+LI F+P NRQIL+FSAT
Sbjct: 221  VGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIHFMPLNRQILLFSAT 280

Query: 416  FPVSVKDFKDRYLEKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSII 237
            FPV+VKDFKDRYL+KPY+INLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSII
Sbjct: 281  FPVTVKDFKDRYLQKPYIINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSII 340

Query: 236  FCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGID 57
            FCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGID
Sbjct: 341  FCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGID 400

Query: 56   IQAVNVVINFDFPR 15
            IQAVNVVINFDFP+
Sbjct: 401  IQAVNVVINFDFPK 414


>ref|XP_002270379.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8 [Vitis vinifera]
            gi|147785187|emb|CAN75439.1| hypothetical protein
            VITISV_000835 [Vitis vinifera]
          Length = 491

 Score =  606 bits (1562), Expect = e-171
 Identities = 298/314 (94%), Positives = 310/314 (98%)
 Frame = -3

Query: 956  EDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDIVARAKNGTGKTAAFCIPALEKI 777
            EDYFLKRELLMGIYEKGFE+PSPIQEESIPIALTGSDI+ARAKNGTGKTAAFCIPALEKI
Sbjct: 120  EDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI 179

Query: 776  DPDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLL 597
            D DNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLL
Sbjct: 180  DQDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLL 239

Query: 596  VGTPGRILDLSKKGVCLLNDCAMLVMDEADKLLSPEFQPSLEELIDFLPQNRQILMFSAT 417
            VGTPGRILDLSKKGVC+L DC+MLVMDEADKLLSPEFQPS+E+LI F+P NRQIL+FSAT
Sbjct: 240  VGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSIEQLIHFMPLNRQILLFSAT 299

Query: 416  FPVSVKDFKDRYLEKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSII 237
            FPV+VKDFKDRYL+KPY+INLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSII
Sbjct: 300  FPVTVKDFKDRYLQKPYIINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSII 359

Query: 236  FCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGID 57
            FCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGID
Sbjct: 360  FCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGID 419

Query: 56   IQAVNVVINFDFPR 15
            IQAVNVVINFDFP+
Sbjct: 420  IQAVNVVINFDFPK 433


>ref|XP_003528863.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 8-like [Glycine max]
          Length = 500

 Score =  605 bits (1559), Expect = e-171
 Identities = 299/314 (95%), Positives = 309/314 (98%)
 Frame = -3

Query: 956  EDYFLKRELLMGIYEKGFEKPSPIQEESIPIALTGSDIVARAKNGTGKTAAFCIPALEKI 777
            EDYFLKRELLMGIYEKGFE+PSPIQEESIPIALTGSDI+ARAKNGTGKTAAFCIPALEKI
Sbjct: 129  EDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI 188

Query: 776  DPDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLL 597
            D DNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLL
Sbjct: 189  DQDNNVIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLL 248

Query: 596  VGTPGRILDLSKKGVCLLNDCAMLVMDEADKLLSPEFQPSLEELIDFLPQNRQILMFSAT 417
            VGTPGRILDL+KKGVC+L DCAMLVMDEADKLLSPEFQPS+E+LI FLP  RQILMFSAT
Sbjct: 249  VGTPGRILDLAKKGVCILKDCAMLVMDEADKLLSPEFQPSIEQLIHFLPTTRQILMFSAT 308

Query: 416  FPVSVKDFKDRYLEKPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSII 237
            FPV+VKDFKDRYL+KPYVINLMDELTLKGITQ+YAFVEERQKVHCLNTLFSKLQINQSII
Sbjct: 309  FPVTVKDFKDRYLQKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSII 368

Query: 236  FCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGID 57
            FCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGID
Sbjct: 369  FCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGID 428

Query: 56   IQAVNVVINFDFPR 15
            IQAVNVVINFDFP+
Sbjct: 429  IQAVNVVINFDFPK 442


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