BLASTX nr result

ID: Panax21_contig00002027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002027
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK93596.1| unknown [Populus trichocarpa]                          273   6e-81
ref|XP_002321226.1| predicted protein [Populus trichocarpa] gi|2...   270   5e-80
gb|ADR71226.1| 60S ribosomal protein L5B [Hevea brasiliensis]         270   1e-79
emb|CBI24704.3| unnamed protein product [Vitis vinifera]              270   2e-79
ref|XP_002277846.1| PREDICTED: 60S ribosomal protein L5-like iso...   270   2e-79

>gb|ABK93596.1| unknown [Populus trichocarpa]
          Length = 298

 Score =  273 bits (698), Expect(2) = 6e-81
 Identities = 131/170 (77%), Positives = 147/170 (86%)
 Frame = +2

Query: 2   IAGDMVLAAAYSHELPHYGLEVGLTNYSAAYCVGLLLARRVLKKLEMDDEYEGNVEATGE 181
           +AGD+V+AAAYSHELPHYGLEVGLTNY+AAYC GLLLARRVLKKLEMD+EYEGNVEATGE
Sbjct: 69  MAGDIVVAAAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDEEYEGNVEATGE 128

Query: 182 DYSVEPAESRRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQ 361
           DYSVEPA+SRRPFRALLDVGL+RTTTGNRVF            IPHS+KRFAGF+KD KQ
Sbjct: 129 DYSVEPADSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFNKDGKQ 188

Query: 362 LDPELHRKYIYGGHVAAYMRTLKEDEPKKYWTHFSRYVRKAISADVVEEL 511
           LD E+HRKYIYGGHVAAYMR L EDEP+KY +HFS Y+++ I  D +EEL
Sbjct: 189 LDAEVHRKYIYGGHVAAYMRNLMEDEPEKYQSHFSEYIKRGIEPDNMEEL 238



 Score = 53.9 bits (128), Expect(2) = 6e-81
 Identities = 27/43 (62%), Positives = 29/43 (67%)
 Frame = +3

Query: 513 KKVHAAIRADXXXXXXXXXXXXXHKRFNLKKLTYEERKNKLIE 641
           KKVHAAIRAD             HKR+NLKKLTYEERK KL+E
Sbjct: 240 KKVHAAIRADPTAKKSEKQLPKEHKRYNLKKLTYEERKAKLVE 282


>ref|XP_002321226.1| predicted protein [Populus trichocarpa] gi|222861999|gb|EEE99541.1|
           predicted protein [Populus trichocarpa]
          Length = 298

 Score =  270 bits (690), Expect(2) = 5e-80
 Identities = 130/170 (76%), Positives = 146/170 (85%)
 Frame = +2

Query: 2   IAGDMVLAAAYSHELPHYGLEVGLTNYSAAYCVGLLLARRVLKKLEMDDEYEGNVEATGE 181
           +AGD+V+AAAYSHELP YGLEVGLTNY+AAYC GLLLARRVLKKLEMD+EYEGNVEATGE
Sbjct: 69  MAGDIVVAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDEEYEGNVEATGE 128

Query: 182 DYSVEPAESRRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQ 361
           DYSVEPA+SRRPFRALLDVGL+RTTTGNRVF            IPHS+KRFAGF+KD KQ
Sbjct: 129 DYSVEPADSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFNKDGKQ 188

Query: 362 LDPELHRKYIYGGHVAAYMRTLKEDEPKKYWTHFSRYVRKAISADVVEEL 511
           LD E+HRKYIYGGHVAAYMR L EDEP+KY +HFS Y+++ I  D +EEL
Sbjct: 189 LDAEVHRKYIYGGHVAAYMRNLMEDEPEKYQSHFSEYIKRGIEPDNMEEL 238



 Score = 53.9 bits (128), Expect(2) = 5e-80
 Identities = 27/43 (62%), Positives = 29/43 (67%)
 Frame = +3

Query: 513 KKVHAAIRADXXXXXXXXXXXXXHKRFNLKKLTYEERKNKLIE 641
           KKVHAAIRAD             HKR+NLKKLTYEERK KL+E
Sbjct: 240 KKVHAAIRADPTAKKSEKQLPKEHKRYNLKKLTYEERKAKLVE 282


>gb|ADR71226.1| 60S ribosomal protein L5B [Hevea brasiliensis]
          Length = 298

 Score =  270 bits (691), Expect(2) = 1e-79
 Identities = 132/170 (77%), Positives = 144/170 (84%)
 Frame = +2

Query: 2   IAGDMVLAAAYSHELPHYGLEVGLTNYSAAYCVGLLLARRVLKKLEMDDEYEGNVEATGE 181
           IAGDMVLAAAYSHELP +GLEVGLTNY+AAYC GLLLARR LKKLEMD+EYEGN EATGE
Sbjct: 69  IAGDMVLAAAYSHELPQFGLEVGLTNYAAAYCTGLLLARRTLKKLEMDEEYEGNEEATGE 128

Query: 182 DYSVEPAESRRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQ 361
           DYSVEPAE+RRPFRALLDVGL+RTTTGN VF            IPHS+KRFAGFSKDSKQ
Sbjct: 129 DYSVEPAETRRPFRALLDVGLVRTTTGNHVFGALKGALDGGLDIPHSDKRFAGFSKDSKQ 188

Query: 362 LDPELHRKYIYGGHVAAYMRTLKEDEPKKYWTHFSRYVRKAISADVVEEL 511
           LD E+HRKYIYGGHVAAYMRTL EDEP+KY  HFS Y+++ I  D +EEL
Sbjct: 189 LDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQLHFSEYIKRGIEPDDMEEL 238



 Score = 52.4 bits (124), Expect(2) = 1e-79
 Identities = 26/43 (60%), Positives = 29/43 (67%)
 Frame = +3

Query: 513 KKVHAAIRADXXXXXXXXXXXXXHKRFNLKKLTYEERKNKLIE 641
           KKVHAAIRAD             HKR+NL+K+TYEERK KLIE
Sbjct: 240 KKVHAAIRADPTAKKSEKQPPKEHKRYNLRKMTYEERKAKLIE 282


>emb|CBI24704.3| unnamed protein product [Vitis vinifera]
          Length = 333

 Score =  270 bits (690), Expect(2) = 2e-79
 Identities = 130/170 (76%), Positives = 145/170 (85%)
 Frame = +2

Query: 2   IAGDMVLAAAYSHELPHYGLEVGLTNYSAAYCVGLLLARRVLKKLEMDDEYEGNVEATGE 181
           IAGD+VLA+AYSHELPHYGLEVGLTNY+AAYC GLLLARRVLK LEMD EYEGNVEATGE
Sbjct: 101 IAGDIVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDGEYEGNVEATGE 160

Query: 182 DYSVEPAESRRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQ 361
           DYSVEP +SRRPFRALLDVGL+RTTTGNRVF            IPHS+KRFAGFSKDSKQ
Sbjct: 161 DYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFSKDSKQ 220

Query: 362 LDPELHRKYIYGGHVAAYMRTLKEDEPKKYWTHFSRYVRKAISADVVEEL 511
           LD E+HRKYIYGGHV+AYM TL EDEP+KY +HFS Y++K +  D +EE+
Sbjct: 221 LDAEVHRKYIYGGHVSAYMGTLIEDEPEKYQSHFSEYIKKGVEPDDIEEM 270



 Score = 52.4 bits (124), Expect(2) = 2e-79
 Identities = 27/43 (62%), Positives = 29/43 (67%)
 Frame = +3

Query: 513 KKVHAAIRADXXXXXXXXXXXXXHKRFNLKKLTYEERKNKLIE 641
           KKVHAAIRA+             HKR+NLKKLTYEERK KLIE
Sbjct: 272 KKVHAAIRANPIQKKVEKQPPKEHKRYNLKKLTYEERKAKLIE 314


>ref|XP_002277846.1| PREDICTED: 60S ribosomal protein L5-like isoform 2 [Vitis vinifera]
          Length = 301

 Score =  270 bits (690), Expect(2) = 2e-79
 Identities = 130/170 (76%), Positives = 145/170 (85%)
 Frame = +2

Query: 2   IAGDMVLAAAYSHELPHYGLEVGLTNYSAAYCVGLLLARRVLKKLEMDDEYEGNVEATGE 181
           IAGD+VLA+AYSHELPHYGLEVGLTNY+AAYC GLLLARRVLK LEMD EYEGNVEATGE
Sbjct: 69  IAGDIVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDGEYEGNVEATGE 128

Query: 182 DYSVEPAESRRPFRALLDVGLIRTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFSKDSKQ 361
           DYSVEP +SRRPFRALLDVGL+RTTTGNRVF            IPHS+KRFAGFSKDSKQ
Sbjct: 129 DYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFSKDSKQ 188

Query: 362 LDPELHRKYIYGGHVAAYMRTLKEDEPKKYWTHFSRYVRKAISADVVEEL 511
           LD E+HRKYIYGGHV+AYM TL EDEP+KY +HFS Y++K +  D +EE+
Sbjct: 189 LDAEVHRKYIYGGHVSAYMGTLIEDEPEKYQSHFSEYIKKGVEPDDIEEM 238



 Score = 52.4 bits (124), Expect(2) = 2e-79
 Identities = 27/43 (62%), Positives = 29/43 (67%)
 Frame = +3

Query: 513 KKVHAAIRADXXXXXXXXXXXXXHKRFNLKKLTYEERKNKLIE 641
           KKVHAAIRA+             HKR+NLKKLTYEERK KLIE
Sbjct: 240 KKVHAAIRANPIQKKVEKQPPKEHKRYNLKKLTYEERKAKLIE 282


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