BLASTX nr result

ID: Panax21_contig00002012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002012
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311105.1| predicted protein [Populus trichocarpa] gi|2...   194   6e-48
ref|XP_002319533.1| predicted protein [Populus trichocarpa] gi|2...   192   2e-47
gb|AFK39481.1| unknown [Medicago truncatula]                          192   3e-47
ref|XP_003603579.1| 26S proteasome non-ATPase regulatory subunit...   192   3e-47
ref|XP_003603578.1| 26S proteasome non-ATPase regulatory subunit...   192   3e-47

>ref|XP_002311105.1| predicted protein [Populus trichocarpa] gi|222850925|gb|EEE88472.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score =  194 bits (493), Expect = 6e-48
 Identities = 103/127 (81%), Positives = 110/127 (86%)
 Frame = -3

Query: 382 IPKAKTAKIVRGIVDSVAKIPGTSDLQISLCKEIVEWTRAEKRTFLRQRIEARLAALLME 203
           IPKAKTAKIVRGI+D+VAKIPGTSDLQISLCKE+V+WTRAEKRTFLRQR+EARLAALLME
Sbjct: 80  IPKAKTAKIVRGIIDAVAKIPGTSDLQISLCKEMVQWTRAEKRTFLRQRVEARLAALLME 139

Query: 202 SKEYSEALNLLSGLIKEVRRLDDKLLLVEIDLLESQLHFSLRXXXXXXXXXXXXXXXXXA 23
           SKEYSEALNLLSGLIKEVRRLDDKLLLV+IDLLES+LHFSLR                 A
Sbjct: 140 SKEYSEALNLLSGLIKEVRRLDDKLLLVDIDLLESKLHFSLRNLPKAKAALTAARTAANA 199

Query: 22  IYVPPAQ 2
           IYVPPAQ
Sbjct: 200 IYVPPAQ 206


>ref|XP_002319533.1| predicted protein [Populus trichocarpa] gi|222857909|gb|EEE95456.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score =  192 bits (489), Expect = 2e-47
 Identities = 101/127 (79%), Positives = 110/127 (86%)
 Frame = -3

Query: 382 IPKAKTAKIVRGIVDSVAKIPGTSDLQISLCKEIVEWTRAEKRTFLRQRIEARLAALLME 203
           IPKAKTAKIVRG++D+VAKIPGTSDLQISLCKE+V+WTRAEKRTFLRQR+EARLAALLME
Sbjct: 80  IPKAKTAKIVRGVIDAVAKIPGTSDLQISLCKEMVQWTRAEKRTFLRQRVEARLAALLME 139

Query: 202 SKEYSEALNLLSGLIKEVRRLDDKLLLVEIDLLESQLHFSLRXXXXXXXXXXXXXXXXXA 23
           +KEYSEALNLLSGLIKEVRRLDDKLLLV+IDLLES+LHFSLR                 A
Sbjct: 140 NKEYSEALNLLSGLIKEVRRLDDKLLLVDIDLLESKLHFSLRNLPKAKAALTAARTAANA 199

Query: 22  IYVPPAQ 2
           IYVPPAQ
Sbjct: 200 IYVPPAQ 206


>gb|AFK39481.1| unknown [Medicago truncatula]
          Length = 244

 Score =  192 bits (487), Expect = 3e-47
 Identities = 102/127 (80%), Positives = 109/127 (85%)
 Frame = -3

Query: 382 IPKAKTAKIVRGIVDSVAKIPGTSDLQISLCKEIVEWTRAEKRTFLRQRIEARLAALLME 203
           IPKAKTAKIVRGI+DSVAKIPGTSDLQISLCKE+V+WTRAEKRTFLRQRIEARLAALLME
Sbjct: 80  IPKAKTAKIVRGIIDSVAKIPGTSDLQISLCKEMVQWTRAEKRTFLRQRIEARLAALLME 139

Query: 202 SKEYSEALNLLSGLIKEVRRLDDKLLLVEIDLLESQLHFSLRXXXXXXXXXXXXXXXXXA 23
           +KEYSEAL LLSGL+KEVRRLDDKLLLV+IDLLES+LHFSLR                 A
Sbjct: 140 TKEYSEALTLLSGLVKEVRRLDDKLLLVDIDLLESKLHFSLRNLPKAKAALTAARTAANA 199

Query: 22  IYVPPAQ 2
           IYVPPAQ
Sbjct: 200 IYVPPAQ 206


>ref|XP_003603579.1| 26S proteasome non-ATPase regulatory subunit [Medicago truncatula]
           gi|355492627|gb|AES73830.1| 26S proteasome non-ATPase
           regulatory subunit [Medicago truncatula]
          Length = 378

 Score =  192 bits (487), Expect = 3e-47
 Identities = 102/127 (80%), Positives = 109/127 (85%)
 Frame = -3

Query: 382 IPKAKTAKIVRGIVDSVAKIPGTSDLQISLCKEIVEWTRAEKRTFLRQRIEARLAALLME 203
           IPKAKTAKIVRGI+DSVAKIPGTSDLQISLCKE+V+WTRAEKRTFLRQRIEARLAALLME
Sbjct: 36  IPKAKTAKIVRGIIDSVAKIPGTSDLQISLCKEMVQWTRAEKRTFLRQRIEARLAALLME 95

Query: 202 SKEYSEALNLLSGLIKEVRRLDDKLLLVEIDLLESQLHFSLRXXXXXXXXXXXXXXXXXA 23
           +KEYSEAL LLSGL+KEVRRLDDKLLLV+IDLLES+LHFSLR                 A
Sbjct: 96  TKEYSEALTLLSGLVKEVRRLDDKLLLVDIDLLESKLHFSLRNLPKAKAALTAARTAANA 155

Query: 22  IYVPPAQ 2
           IYVPPAQ
Sbjct: 156 IYVPPAQ 162


>ref|XP_003603578.1| 26S proteasome non-ATPase regulatory subunit [Medicago truncatula]
           gi|355492626|gb|AES73829.1| 26S proteasome non-ATPase
           regulatory subunit [Medicago truncatula]
          Length = 671

 Score =  192 bits (487), Expect = 3e-47
 Identities = 102/127 (80%), Positives = 109/127 (85%)
 Frame = -3

Query: 382 IPKAKTAKIVRGIVDSVAKIPGTSDLQISLCKEIVEWTRAEKRTFLRQRIEARLAALLME 203
           IPKAKTAKIVRGI+DSVAKIPGTSDLQISLCKE+V+WTRAEKRTFLRQRIEARLAALLME
Sbjct: 329 IPKAKTAKIVRGIIDSVAKIPGTSDLQISLCKEMVQWTRAEKRTFLRQRIEARLAALLME 388

Query: 202 SKEYSEALNLLSGLIKEVRRLDDKLLLVEIDLLESQLHFSLRXXXXXXXXXXXXXXXXXA 23
           +KEYSEAL LLSGL+KEVRRLDDKLLLV+IDLLES+LHFSLR                 A
Sbjct: 389 TKEYSEALTLLSGLVKEVRRLDDKLLLVDIDLLESKLHFSLRNLPKAKAALTAARTAANA 448

Query: 22  IYVPPAQ 2
           IYVPPAQ
Sbjct: 449 IYVPPAQ 455


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