BLASTX nr result

ID: Panax21_contig00002008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00002008
         (774 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42275.1| unknown [Lotus japonicus]                               94   3e-17
tpg|DAA51077.1| TPA: hypothetical protein ZEAMMB73_041769 [Zea m...    70   1e-14
gb|EEE56876.1| hypothetical protein OsJ_06515 [Oryza sativa Japo...    74   3e-14
dbj|BAD15792.1| hypothetical protein [Oryza sativa Japonica Grou...    74   3e-14
emb|CAE04869.2| OSJNBa0086O06.17 [Oryza sativa Japonica Group]         72   7e-14

>gb|AFK42275.1| unknown [Lotus japonicus]
          Length = 299

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 63/186 (33%), Positives = 87/186 (46%), Gaps = 8/186 (4%)
 Frame = +3

Query: 210 LEMAVVELEKNMLKILPNTDLREMPHIESKIKTWKKLWGCIYGALSTSGIAWSESQKMLN 389
           L+ A  +LEK      P   ++  PHIES +K  K ++  +Y  L+ SG  W + +KM  
Sbjct: 52  LKAAEAKLEKKF----PGCGIKVKPHIESAMKRLKGVYNVVYDMLNQSGFGWDDEKKM-- 105

Query: 390 IKDEDEDVWTSYCKKDPDIIKLRNTSLTWYEDWQQIFGKDRTTGEHAEVRGDVVEELDKE 569
           IK + EDVW  Y K  P+    RN  +   E     FGKDR TG+ A    DVVEELDKE
Sbjct: 106 IKVDSEDVWNEYIKSHPNAKDYRNARIPLLEKLAYAFGKDRATGKLAYSPADVVEELDKE 165

Query: 570 E--------ATGDSKATDRRNKKLKRQDGLLETMHDSFNGFINTTAQHLGLMTQRIGYDQ 725
           E           +   T   NK   R+D L+E+     N   N  A  +  +   +G   
Sbjct: 166 EEEQAHHDDVRVEMTPTSSVNKSQCRKDDLVESQSRKKNRGANLIANSISELGNTLGKWL 225

Query: 726 DLAKSR 743
           +L+  R
Sbjct: 226 ELSAER 231


>tpg|DAA51077.1| TPA: hypothetical protein ZEAMMB73_041769 [Zea mays]
          Length = 308

 Score = 70.5 bits (171), Expect(2) = 1e-14
 Identities = 37/118 (31%), Positives = 64/118 (54%)
 Frame = +3

Query: 231 LEKNMLKILPNTDLREMPHIESKIKTWKKLWGCIYGALSTSGIAWSESQKMLNIKDEDED 410
           LE  +   LP   L  +PHIES+++ ++  +G I   L+ SG  W +++KM+  + +   
Sbjct: 55  LENELKARLPGCGLSAIPHIESRVRHFRTKYGAIEVMLAKSGFNWDDNRKMVQCEKQQ-- 112

Query: 411 VWTSYCKKDPDIIKLRNTSLTWYEDWQQIFGKDRTTGEHAEVRGDVVEELDKEEATGD 584
            + ++CK +PD   L   +   ++    I+GKD  TGE  E  G+ V  ++KE A G+
Sbjct: 113 -YEAHCKDNPDAKGLYGIAFPHFDTLAAIYGKDIATGEGVEGLGEAVINMEKEIAMGE 169



 Score = 35.0 bits (79), Expect(2) = 1e-14
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +2

Query: 77  ESSSSSQKHSRDVRNRRWTFIEEKALVDSFYQIIAKGFKQDNGQFRNG 220
           +S SSS    R    R WT+ E++ L+ + Y+I      +  G F+NG
Sbjct: 3   QSESSSVARGRGKNKRIWTYYEDEELIKALYEISLDPKWKSEGDFKNG 50


>gb|EEE56876.1| hypothetical protein OsJ_06515 [Oryza sativa Japonica Group]
          Length = 397

 Score = 73.9 bits (180), Expect(2) = 3e-14
 Identities = 38/113 (33%), Positives = 65/113 (57%)
 Frame = +3

Query: 231 LEKNMLKILPNTDLREMPHIESKIKTWKKLWGCIYGALSTSGIAWSESQKMLNIKDEDED 410
           LE  + K LPN+ L  +PHIES+++ ++  +G I   L+ SG +W +++KM+  + +  D
Sbjct: 55  LENVLAKKLPNSGLTAVPHIESRVRHFRTKFGAIEVMLTKSGFSWDDNRKMIQCEKQQYD 114

Query: 411 VWTSYCKKDPDIIKLRNTSLTWYEDWQQIFGKDRTTGEHAEVRGDVVEELDKE 569
               +C+K+ +   L   +   Y+    I+GKD  TGE AE  G+ V  ++KE
Sbjct: 115 ---DHCRKNNEAKGLYGVAFPHYDTLAAIYGKDIATGEGAEGFGEAVANMEKE 164



 Score = 30.4 bits (67), Expect(2) = 3e-14
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +2

Query: 86  SSSQKHSRDVRNRRWTFIEEKALVDSFYQIIAKGFKQDNGQFRNG 220
           SSS    R    R WT+ E++ L+ + ++I      +  G F+NG
Sbjct: 6   SSSIVRGRGNNKRIWTYFEDEELIKALFEIALDPSWKSEGGFKNG 50


>dbj|BAD15792.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|46390545|dbj|BAD16032.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 396

 Score = 73.9 bits (180), Expect(2) = 3e-14
 Identities = 38/113 (33%), Positives = 65/113 (57%)
 Frame = +3

Query: 231 LEKNMLKILPNTDLREMPHIESKIKTWKKLWGCIYGALSTSGIAWSESQKMLNIKDEDED 410
           LE  + K LPN+ L  +PHIES+++ ++  +G I   L+ SG +W +++KM+  + +  D
Sbjct: 55  LENVLAKKLPNSGLTAVPHIESRVRHFRTKFGAIEVMLTKSGFSWDDNRKMIQCEKQQYD 114

Query: 411 VWTSYCKKDPDIIKLRNTSLTWYEDWQQIFGKDRTTGEHAEVRGDVVEELDKE 569
               +C+K+ +   L   +   Y+    I+GKD  TGE AE  G+ V  ++KE
Sbjct: 115 ---DHCRKNNEAKGLYGVAFPHYDTLAAIYGKDIATGEGAEGFGEAVANMEKE 164



 Score = 30.4 bits (67), Expect(2) = 3e-14
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +2

Query: 86  SSSQKHSRDVRNRRWTFIEEKALVDSFYQIIAKGFKQDNGQFRNG 220
           SSS    R    R WT+ E++ L+ + ++I      +  G F+NG
Sbjct: 6   SSSIVRGRGNNKRIWTYFEDEELIKALFEIALDPSWKSEGGFKNG 50


>emb|CAE04869.2| OSJNBa0086O06.17 [Oryza sativa Japonica Group]
          Length = 535

 Score = 72.4 bits (176), Expect(2) = 7e-14
 Identities = 37/113 (32%), Positives = 65/113 (57%)
 Frame = +3

Query: 231 LEKNMLKILPNTDLREMPHIESKIKTWKKLWGCIYGALSTSGIAWSESQKMLNIKDEDED 410
           LE  + K LP++ L  +PHIES+++ ++  +G I   L+ SG +W +++KM+  + +  D
Sbjct: 219 LENVLAKKLPSSGLTAVPHIESRVRHFRTKFGAIEVMLTKSGFSWDDNRKMIQCEKQQYD 278

Query: 411 VWTSYCKKDPDIIKLRNTSLTWYEDWQQIFGKDRTTGEHAEVRGDVVEELDKE 569
               +C+K+ +   L   +   Y+    I+GKD  TGE AE  G+ V  ++KE
Sbjct: 279 ---DHCRKNNEAKGLYGVAFPHYDTLAAIYGKDIATGEGAEGLGEAVANMEKE 328



 Score = 30.8 bits (68), Expect(2) = 7e-14
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +2

Query: 86  SSSQKHSRDVRNRRWTFIEEKALVDSFYQIIAKGFKQDNGQFRNG 220
           SSS    R    R WT+ E++ L+ + ++I      +  G F+NG
Sbjct: 170 SSSIVRGRGKNKRIWTYFEDEELIKALFEIALDPSWKSEGGFKNG 214


Top