BLASTX nr result
ID: Panax21_contig00001995
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00001995
(649 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273941.2| PREDICTED: putative E3 ubiquitin-protein lig... 111 4e-49
emb|CBI30594.3| unnamed protein product [Vitis vinifera] 111 4e-49
emb|CAN59794.1| hypothetical protein VITISV_001902 [Vitis vinifera] 110 1e-46
ref|XP_002509447.1| ring finger protein, putative [Ricinus commu... 105 5e-46
ref|XP_002305782.1| predicted protein [Populus trichocarpa] gi|2... 103 6e-44
>ref|XP_002273941.2| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like [Vitis
vinifera]
Length = 534
Score = 111 bits (277), Expect(2) = 4e-49
Identities = 58/77 (75%), Positives = 62/77 (80%)
Frame = -1
Query: 649 SRRSLRDDPNYDALIAALYPDIDKYXXXXXXXXXXEKARNKQIQTLIAQTMRRQSEALGK 470
SRRSLRDDPNYDALIAALYPDIDKY EK RNKQIQ IAQT+RRQSEALG+
Sbjct: 209 SRRSLRDDPNYDALIAALYPDIDKYEQEELAFHEEEKTRNKQIQASIAQTLRRQSEALGR 268
Query: 469 KRTSARVTAAAFVRRSQ 419
KRT+A+ TAAAF RRSQ
Sbjct: 269 KRTTAKATAAAFARRSQ 285
Score = 109 bits (273), Expect(2) = 4e-49
Identities = 54/100 (54%), Positives = 72/100 (72%)
Frame = -3
Query: 305 SSSDEQVTEVKPKRCKRWGGARCSQTYLXXXXXXXXXXXXXSEVNRDSVGAAAGLVGSSE 126
SS+++ EVKPKR +RWGG R SQ E NR+++GA+AGLVG+SE
Sbjct: 319 SSAEDHSAEVKPKRSRRWGGVRFSQPSSGAANADGGGDENDLEPNREAMGASAGLVGNSE 378
Query: 125 MLAWGGGGVRSNTRHGSLSAGNGKNARTIRVSKLLENLRN 6
+LAWG GG+RS+TR+GS+S GNGKNAR+ R+SKL++ LRN
Sbjct: 379 ILAWGKGGMRSHTRYGSVSGGNGKNARSSRLSKLVDYLRN 418
>emb|CBI30594.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 111 bits (277), Expect(2) = 4e-49
Identities = 58/77 (75%), Positives = 62/77 (80%)
Frame = -1
Query: 649 SRRSLRDDPNYDALIAALYPDIDKYXXXXXXXXXXEKARNKQIQTLIAQTMRRQSEALGK 470
SRRSLRDDPNYDALIAALYPDIDKY EK RNKQIQ IAQT+RRQSEALG+
Sbjct: 108 SRRSLRDDPNYDALIAALYPDIDKYEQEELAFHEEEKTRNKQIQASIAQTLRRQSEALGR 167
Query: 469 KRTSARVTAAAFVRRSQ 419
KRT+A+ TAAAF RRSQ
Sbjct: 168 KRTTAKATAAAFARRSQ 184
Score = 109 bits (273), Expect(2) = 4e-49
Identities = 54/100 (54%), Positives = 72/100 (72%)
Frame = -3
Query: 305 SSSDEQVTEVKPKRCKRWGGARCSQTYLXXXXXXXXXXXXXSEVNRDSVGAAAGLVGSSE 126
SS+++ EVKPKR +RWGG R SQ E NR+++GA+AGLVG+SE
Sbjct: 218 SSAEDHSAEVKPKRSRRWGGVRFSQPSSGAANADGGGDENDLEPNREAMGASAGLVGNSE 277
Query: 125 MLAWGGGGVRSNTRHGSLSAGNGKNARTIRVSKLLENLRN 6
+LAWG GG+RS+TR+GS+S GNGKNAR+ R+SKL++ LRN
Sbjct: 278 ILAWGKGGMRSHTRYGSVSGGNGKNARSSRLSKLVDYLRN 317
>emb|CAN59794.1| hypothetical protein VITISV_001902 [Vitis vinifera]
Length = 636
Score = 110 bits (275), Expect(2) = 1e-46
Identities = 54/100 (54%), Positives = 72/100 (72%)
Frame = -3
Query: 305 SSSDEQVTEVKPKRCKRWGGARCSQTYLXXXXXXXXXXXXXSEVNRDSVGAAAGLVGSSE 126
SS+++ EVKPKR +RWGG R SQ E NR+++GA+AGLVG+SE
Sbjct: 450 SSAEDHSAEVKPKRSRRWGGVRFSQPSSGSANADGGGDENDLEANREAMGASAGLVGNSE 509
Query: 125 MLAWGGGGVRSNTRHGSLSAGNGKNARTIRVSKLLENLRN 6
+LAWG GG+RS+TR+GS+S GNGKNAR+ R+SKL++ LRN
Sbjct: 510 ILAWGKGGMRSHTRYGSVSGGNGKNARSSRLSKLVDYLRN 549
Score = 102 bits (253), Expect(2) = 1e-46
Identities = 57/90 (63%), Positives = 61/90 (67%), Gaps = 13/90 (14%)
Frame = -1
Query: 649 SRRSLRDDPNYDALIAALYPDIDKYXXXXXXXXXXE-------------KARNKQIQTLI 509
SRRSLRDDPNYDALIAALYPDIDKY K RNKQIQ I
Sbjct: 327 SRRSLRDDPNYDALIAALYPDIDKYEQEVYLTNSMPSQIGKELAFHEEEKTRNKQIQASI 386
Query: 508 AQTMRRQSEALGKKRTSARVTAAAFVRRSQ 419
AQT+RRQSEALG+KRT+A+ TAAAF RRSQ
Sbjct: 387 AQTLRRQSEALGRKRTTAKATAAAFARRSQ 416
>ref|XP_002509447.1| ring finger protein, putative [Ricinus communis]
gi|223549346|gb|EEF50834.1| ring finger protein,
putative [Ricinus communis]
Length = 418
Score = 105 bits (262), Expect(2) = 5e-46
Identities = 56/100 (56%), Positives = 68/100 (68%)
Frame = -3
Query: 305 SSSDEQVTEVKPKRCKRWGGARCSQTYLXXXXXXXXXXXXXSEVNRDSVGAAAGLVGSSE 126
SS++E EVKPKR KRWGGAR SEVNR+S+G++AGLVG SE
Sbjct: 198 SSAEEHSAEVKPKRIKRWGGARSGAA-----NADGGGDENDSEVNRESMGSSAGLVGPSE 252
Query: 125 MLAWGGGGVRSNTRHGSLSAGNGKNARTIRVSKLLENLRN 6
LAWG GG+RS+TR+GS +AGNGKNAR R+ KL + LRN
Sbjct: 253 RLAWGRGGIRSHTRYGSANAGNGKNARNSRIFKLADYLRN 292
Score = 105 bits (261), Expect(2) = 5e-46
Identities = 54/77 (70%), Positives = 60/77 (77%)
Frame = -1
Query: 649 SRRSLRDDPNYDALIAALYPDIDKYXXXXXXXXXXEKARNKQIQTLIAQTMRRQSEALGK 470
SRRSLRDDPNYDALIAALYPDIDKY EKARNKQIQ I QT+RRQ+EALG+
Sbjct: 85 SRRSLRDDPNYDALIAALYPDIDKYEEEELAFHEEEKARNKQIQASITQTIRRQAEALGR 144
Query: 469 KRTSARVTAAAFVRRSQ 419
KRT+A+ T A F RR+Q
Sbjct: 145 KRTTAKATVAPFARRTQ 161
>ref|XP_002305782.1| predicted protein [Populus trichocarpa] gi|222848746|gb|EEE86293.1|
predicted protein [Populus trichocarpa]
Length = 463
Score = 103 bits (256), Expect(2) = 6e-44
Identities = 53/76 (69%), Positives = 60/76 (78%)
Frame = -1
Query: 649 SRRSLRDDPNYDALIAALYPDIDKYXXXXXXXXXXEKARNKQIQTLIAQTMRRQSEALGK 470
SRRSLRDDPNYDALI+ALYPDIDKY EKARNKQIQ IAQT RQ+EAL +
Sbjct: 135 SRRSLRDDPNYDALISALYPDIDKYEEEELAFQEEEKARNKQIQATIAQTFHRQAEALSR 194
Query: 469 KRTSARVTAAAFVRRS 422
K+T+A+VTAAAF RR+
Sbjct: 195 KKTTAKVTAAAFARRT 210
Score = 100 bits (249), Expect(2) = 6e-44
Identities = 53/100 (53%), Positives = 67/100 (67%)
Frame = -3
Query: 305 SSSDEQVTEVKPKRCKRWGGARCSQTYLXXXXXXXXXXXXXSEVNRDSVGAAAGLVGSSE 126
SS+DE EVKPKRCK+W GAR + SEVN++SVG ++GLVGSSE
Sbjct: 248 SSADEHSAEVKPKRCKKWAGARSAAV-----NADGGGDENDSEVNKESVGGSSGLVGSSE 302
Query: 125 MLAWGGGGVRSNTRHGSLSAGNGKNARTIRVSKLLENLRN 6
LAWG G+RS+TR+GS + N KNAR+ R+SKL + LRN
Sbjct: 303 RLAWGKNGMRSHTRYGSANGSNVKNARSSRISKLADYLRN 342