BLASTX nr result

ID: Panax21_contig00001989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001989
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002339510.1| predicted protein [Populus trichocarpa] gi|2...   299   4e-79
ref|XP_002279148.1| PREDICTED: polyadenylate-binding protein 2-l...   299   5e-79
ref|XP_002511041.1| polyadenylate-binding protein, putative [Ric...   297   1e-78
ref|XP_002511038.1| polyadenylate-binding protein, putative [Ric...   285   1e-74
ref|XP_002321779.1| predicted protein [Populus trichocarpa] gi|2...   284   2e-74

>ref|XP_002339510.1| predicted protein [Populus trichocarpa] gi|222832586|gb|EEE71063.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  299 bits (766), Expect = 4e-79
 Identities = 156/194 (80%), Positives = 161/194 (82%)
 Frame = +3

Query: 180 VYGGEIPDEGEMXXXXXXXXXXXXXXXXXXXXXXXXXXXEDMKKRLKEIEEEAGALREMQ 359
           VYGGEIPDEGEM                           EDMKKRLKEIEEEAGALREMQ
Sbjct: 16  VYGGEIPDEGEMDADVDMSSRAEEDEYQDPNSKDL----EDMKKRLKEIEEEAGALREMQ 71

Query: 360 AKVEKEMGAVQDSSGASATQAEKEEADARSIYVGNVDYACTPEEVQQHFQSCGTVNRVTI 539
           AKVEKEMGAVQDS GASATQAEKEE D+RSIYVGNVDY+CTPEEVQQHFQSCGTVNRVTI
Sbjct: 72  AKVEKEMGAVQDSPGASATQAEKEEVDSRSIYVGNVDYSCTPEEVQQHFQSCGTVNRVTI 131

Query: 540 LTDKFGQPKGFAYVEFVELDAIQNALLLNESELHGRQLKVAAKRTNVPGMKQFRGRHPSP 719
           LTDKFGQPKGFAYVEFVE+DAIQNALLLNESELHGRQLKV+AKRTNVPGMKQFRGR PSP
Sbjct: 132 LTDKFGQPKGFAYVEFVEVDAIQNALLLNESELHGRQLKVSAKRTNVPGMKQFRGRRPSP 191

Query: 720 YFGFRSRRPYMPGP 761
           Y G RSRRP+MP P
Sbjct: 192 Y-GLRSRRPFMPAP 204


>ref|XP_002279148.1| PREDICTED: polyadenylate-binding protein 2-like [Vitis vinifera]
          Length = 226

 Score =  299 bits (765), Expect = 5e-79
 Identities = 153/194 (78%), Positives = 162/194 (83%)
 Frame = +3

Query: 180 VYGGEIPDEGEMXXXXXXXXXXXXXXXXXXXXXXXXXXXEDMKKRLKEIEEEAGALREMQ 359
           VYGGEIPDEGEM                           EDM+KRLKEIEEEAGALREMQ
Sbjct: 14  VYGGEIPDEGEMDADAEDVDMVSRPEDDSDPNSKNI---EDMRKRLKEIEEEAGALREMQ 70

Query: 360 AKVEKEMGAVQDSSGASATQAEKEEADARSIYVGNVDYACTPEEVQQHFQSCGTVNRVTI 539
           AKVEKEMGAVQDSS ASATQAEKEE D+RSIYVGNVDYACTPEEVQQHFQSCGTVNRVTI
Sbjct: 71  AKVEKEMGAVQDSSSASATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTI 130

Query: 540 LTDKFGQPKGFAYVEFVELDAIQNALLLNESELHGRQLKVAAKRTNVPGMKQFRGRHPSP 719
           LTDKFGQPKGFAYVEFVE+DA+QNALLLNESELHGRQLKV+AKRTN+PGMKQ+RGR P+P
Sbjct: 131 LTDKFGQPKGFAYVEFVEIDAVQNALLLNESELHGRQLKVSAKRTNIPGMKQYRGRRPNP 190

Query: 720 YFGFRSRRPYMPGP 761
            FGFR RRP+MPGP
Sbjct: 191 -FGFRGRRPFMPGP 203


>ref|XP_002511041.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223550156|gb|EEF51643.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 231

 Score =  297 bits (761), Expect = 1e-78
 Identities = 151/198 (76%), Positives = 160/198 (80%), Gaps = 4/198 (2%)
 Frame = +3

Query: 180 VYGGEIPDEGEMXXXXXXXXXXXXXXXXXXXXXXXXXXX----EDMKKRLKEIEEEAGAL 347
           VYG EIPDEGEM                               EDMKKRLKEIEEEAGAL
Sbjct: 13  VYGSEIPDEGEMDADIDMSSRPEEEEEEVEEEYDEQNPNSKDLEDMKKRLKEIEEEAGAL 72

Query: 348 REMQAKVEKEMGAVQDSSGASATQAEKEEADARSIYVGNVDYACTPEEVQQHFQSCGTVN 527
           REMQAKVEKEMGAVQDSS  SATQAEKEE D+RS+YVGNVDYACTPEEVQQHFQSCGTVN
Sbjct: 73  REMQAKVEKEMGAVQDSSSGSATQAEKEEVDSRSVYVGNVDYACTPEEVQQHFQSCGTVN 132

Query: 528 RVTILTDKFGQPKGFAYVEFVELDAIQNALLLNESELHGRQLKVAAKRTNVPGMKQFRGR 707
           RVTILTDKFGQPKGFAYVEFVE+DA+QNALLLNESELHGRQLKV+AKRTN+PGMKQ+RGR
Sbjct: 133 RVTILTDKFGQPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNIPGMKQYRGR 192

Query: 708 HPSPYFGFRSRRPYMPGP 761
            P+PY GFRSRRP+MP P
Sbjct: 193 RPNPYSGFRSRRPFMPAP 210


>ref|XP_002511038.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223550153|gb|EEF51640.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 234

 Score =  285 bits (728), Expect = 1e-74
 Identities = 151/214 (70%), Positives = 159/214 (74%), Gaps = 20/214 (9%)
 Frame = +3

Query: 180 VYGGEIPDEGEMXXXXXXXXXXXXXXXXXXXXXXXXXXX----EDMKKRLKEIEEEAGAL 347
           VYG EIPDEGEM                               EDMKKRLKEIEEEAGAL
Sbjct: 13  VYGSEIPDEGEMDADIDMSSRPEEEEEEVEEEYDEQNPNSKDLEDMKKRLKEIEEEAGAL 72

Query: 348 REMQAKVEKEMGAVQD----------------SSGASATQAEKEEADARSIYVGNVDYAC 479
           REMQAKVEKEMGAVQ                 SS  SATQAEKEE D+RSIYVGNVDYAC
Sbjct: 73  REMQAKVEKEMGAVQGISHSLPLSIYIVLWSYSSSGSATQAEKEEVDSRSIYVGNVDYAC 132

Query: 480 TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVELDAIQNALLLNESELHGRQLKV 659
           TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVE+DA+QNALLLNESELHGRQLKV
Sbjct: 133 TPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVDAVQNALLLNESELHGRQLKV 192

Query: 660 AAKRTNVPGMKQFRGRHPSPYFGFRSRRPYMPGP 761
           +AKRTN+PGMKQ+RGR P+PY GFRSRRP+MP P
Sbjct: 193 SAKRTNIPGMKQYRGRRPNPYSGFRSRRPFMPAP 226


>ref|XP_002321779.1| predicted protein [Populus trichocarpa] gi|222868775|gb|EEF05906.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score =  284 bits (726), Expect = 2e-74
 Identities = 148/194 (76%), Positives = 159/194 (81%)
 Frame = +3

Query: 180 VYGGEIPDEGEMXXXXXXXXXXXXXXXXXXXXXXXXXXXEDMKKRLKEIEEEAGALREMQ 359
           VYGGEIPDEGEM                           EDMK+RLKEIEEEAGALREMQ
Sbjct: 16  VYGGEIPDEGEMDADADMSSRAEEDEYQDPNSKDL----EDMKRRLKEIEEEAGALREMQ 71

Query: 360 AKVEKEMGAVQDSSGASATQAEKEEADARSIYVGNVDYACTPEEVQQHFQSCGTVNRVTI 539
           AKVEKEMGAVQ   GASATQAEKEE D+RSIYVGNVDY+CTPEEVQQHFQSCGTVNRVTI
Sbjct: 72  AKVEKEMGAVQ---GASATQAEKEEVDSRSIYVGNVDYSCTPEEVQQHFQSCGTVNRVTI 128

Query: 540 LTDKFGQPKGFAYVEFVELDAIQNALLLNESELHGRQLKVAAKRTNVPGMKQFRGRHPSP 719
           LTDKFGQPKGFAYVEF+E+DA+QNA+LLNESELHGRQLKV+AKRTNVPGMKQ+RGR PSP
Sbjct: 129 LTDKFGQPKGFAYVEFIEVDAVQNAVLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPSP 188

Query: 720 YFGFRSRRPYMPGP 761
           Y GFRS+R +MP P
Sbjct: 189 Y-GFRSQRAFMPAP 201


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