BLASTX nr result
ID: Panax21_contig00001967
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00001967
(831 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containi... 183 4e-44
ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containi... 164 3e-38
ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containi... 159 1e-36
ref|XP_002320827.1| predicted protein [Populus trichocarpa] gi|2... 157 4e-36
ref|XP_002511921.1| pentatricopeptide repeat-containing protein,... 153 5e-35
>ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product
[Vitis vinifera]
Length = 765
Score = 183 bits (465), Expect = 4e-44
Identities = 86/121 (71%), Positives = 105/121 (86%)
Frame = -1
Query: 831 AIKLFDDMGSASKIPPNTVIYNILIDSLCKNIEVEDALYLMDDMKAKGVRPNTTTFNAMF 652
A+K+F DM S SK+PPNTVIYNILI+SLC+ +V+ AL LMDDMK KGV+PNT TFNAMF
Sbjct: 645 AMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMF 704
Query: 651 KGLRDKNWLNKALILMDQMTEQACNPDYITMEILTDWLPTVGKTKKLQSFLQGYKISSSL 472
KGL++KNWL+KA LMD+MTE ACNPDYITMEILT+WL VG+T KL+SF+QGY++S+S
Sbjct: 705 KGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAKLKSFVQGYEVSASA 764
Query: 471 A 469
A
Sbjct: 765 A 765
Score = 73.2 bits (178), Expect = 7e-11
Identities = 38/115 (33%), Positives = 59/115 (51%)
Frame = -1
Query: 831 AIKLFDDMGSASKIPPNTVIYNILIDSLCKNIEVEDALYLMDDMKAKGVRPNTTTFNAMF 652
A +LFD M +PPN V N L+D +CK+ + A+ ++M+ KG++ N T+ A+
Sbjct: 435 ARELFDQMNKDG-VPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALI 493
Query: 651 KGLRDKNWLNKALILMDQMTEQACNPDYITMEILTDWLPTVGKTKKLQSFLQGYK 487
+ + N + KA+ L D+M E C+PD I L L GK + L K
Sbjct: 494 RAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMK 548
Score = 57.0 bits (136), Expect = 5e-06
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Frame = -1
Query: 831 AIKLFDDMGSASK----IPPNTVIYNILIDSLCKNIEVEDALYLMDDMKAKG-VRPNTTT 667
A+++F+ M + P+ + YN LID LCK E+ L L++ M+++ PNT T
Sbjct: 359 ALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVT 418
Query: 666 FNAMFKGLRDKNWLNKALILMDQMTEQACNPDYITMEILTDWLPTVGK 523
+N + G + + A L DQM + P+ +T+ L D + G+
Sbjct: 419 YNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGR 466
>ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
gi|449475521|ref|XP_004154479.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
Length = 660
Score = 164 bits (414), Expect = 3e-38
Identities = 79/114 (69%), Positives = 94/114 (82%), Gaps = 1/114 (0%)
Frame = -1
Query: 831 AIKLFDDMGS-ASKIPPNTVIYNILIDSLCKNIEVEDALYLMDDMKAKGVRPNTTTFNAM 655
AIK+F +M + ASK+PPNTVIYNILIDSLCK +V AL L+DDMK +GV PNTTT+N++
Sbjct: 493 AIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSI 552
Query: 654 FKGLRDKNWLNKALILMDQMTEQACNPDYITMEILTDWLPTVGKTKKLQSFLQG 493
FK LRDKNWL+KA LMD+M EQACNPDYITMEILT+WL VG+ KL+ F QG
Sbjct: 553 FKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTEWLSAVGEITKLKKFTQG 606
Score = 64.7 bits (156), Expect = 2e-08
Identities = 35/130 (26%), Positives = 63/130 (48%)
Frame = -1
Query: 831 AIKLFDDMGSASKIPPNTVIYNILIDSLCKNIEVEDALYLMDDMKAKGVRPNTTTFNAMF 652
A KLF++M +A +I PN + N L+D +CK+ + A+ M+ KG++ N T+
Sbjct: 282 AHKLFNEMENA-QIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFI 340
Query: 651 KGLRDKNWLNKALILMDQMTEQACNPDYITMEILTDWLPTVGKTKKLQSFLQGYKISSSL 472
+ N +NKA+ +D+M++ C PD + L L G+ S + K +
Sbjct: 341 NAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFC 400
Query: 471 A*SPCWRTMV 442
C+ ++
Sbjct: 401 LDRVCYNVLI 410
Score = 58.5 bits (140), Expect = 2e-06
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Frame = -1
Query: 831 AIKLFDDMGSASK-----IPPNTVIYNILIDSLCKNIEVEDALYLMDDMKAKGVRPNTTT 667
A+++F+ M + + P+T++YN LID LCK E+AL LM M++ P T T
Sbjct: 206 ALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAPTTAT 265
Query: 666 FNAMFKGLRDKNWLNKALILMDQMTEQACNPDYITMEILTD 544
FN + G + A L ++M P+ IT+ L D
Sbjct: 266 FNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVD 306
>ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 159 bits (401), Expect = 1e-36
Identities = 73/117 (62%), Positives = 97/117 (82%)
Frame = -1
Query: 828 IKLFDDMGSASKIPPNTVIYNILIDSLCKNIEVEDALYLMDDMKAKGVRPNTTTFNAMFK 649
+K+F +M S SK+PPNTVIYNILID+LC+N +V+ A+ LM+DMK K VRPNTTT+NA+ K
Sbjct: 623 MKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILK 682
Query: 648 GLRDKNWLNKALILMDQMTEQACNPDYITMEILTDWLPTVGKTKKLQSFLQGYKISS 478
G+RDK L+KA LMD+M E+AC PDYITME+LT+WL VG+ +KL+ F++GY+ SS
Sbjct: 683 GVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEKLKHFVEGYQDSS 739
Score = 65.9 bits (159), Expect = 1e-08
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Frame = -1
Query: 792 IPPNTVIYNILIDSLCKNIEVEDALYLMDDMKAKGV-RPNTTTFNAMFKGLRDKNWLNKA 616
+ P+ V++N LID LCK + ED L L+++MK + RPNT T+N + G ++A
Sbjct: 353 VEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRA 412
Query: 615 LILMDQMTEQACNPDYITMEILTDWLPTVGKTKKLQSFLQGYK 487
L QM E+ P+ IT+ L D L G+ + F K
Sbjct: 413 HELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMK 455
Score = 62.4 bits (150), Expect = 1e-07
Identities = 33/130 (25%), Positives = 59/130 (45%)
Frame = -1
Query: 831 AIKLFDDMGSASKIPPNTVIYNILIDSLCKNIEVEDALYLMDDMKAKGVRPNTTTFNAMF 652
A +LF M + PN + N L+D LCK+ V A+ ++MK KG++ N T+ A+
Sbjct: 412 AHELFRQMNEEG-VQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALI 470
Query: 651 KGLRDKNWLNKALILMDQMTEQACNPDYITMEILTDWLPTVGKTKKLQSFLQGYKISSSL 472
N +N+A+ ++M C+PD + L L G+ + K++
Sbjct: 471 SAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFS 530
Query: 471 A*SPCWRTMV 442
C+ ++
Sbjct: 531 LDRSCYNVLI 540
>ref|XP_002320827.1| predicted protein [Populus trichocarpa] gi|222861600|gb|EEE99142.1|
predicted protein [Populus trichocarpa]
Length = 775
Score = 157 bits (396), Expect = 4e-36
Identities = 75/121 (61%), Positives = 97/121 (80%)
Frame = -1
Query: 831 AIKLFDDMGSASKIPPNTVIYNILIDSLCKNIEVEDALYLMDDMKAKGVRPNTTTFNAMF 652
A+++F DM +ASK+PPNTVIYNILI+SLCKN +V+ A+ LM+DMK GV PNTTT+NA+F
Sbjct: 648 AMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIF 707
Query: 651 KGLRDKNWLNKALILMDQMTEQACNPDYITMEILTDWLPTVGKTKKLQSFLQGYKISSSL 472
KGLRD+ L K MD+M E ACNPDYITMEILT+WL VG+ ++L+ F+ G ++SSS
Sbjct: 708 KGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKKFVAGCEVSSST 767
Query: 471 A 469
A
Sbjct: 768 A 768
Score = 60.5 bits (145), Expect = 5e-07
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Frame = -1
Query: 807 GSASKIPPNTVIYNILIDSLCKNIEVEDALYLMDDMKA-KGVRPNTTTFNAMFKGLRDKN 631
G + + P+ VIYN LID LCK ++ L LM+ M++ KG P+T T+N + G
Sbjct: 374 GISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAG 433
Query: 630 WLNKALILMDQMTEQACNPDYITMEILTDWLPTVGKTKKLQSF 502
+ K L D+M ++ P+ +T+ L + G+ +F
Sbjct: 434 EIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNF 476
>ref|XP_002511921.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223549101|gb|EEF50590.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 248
Score = 153 bits (386), Expect = 5e-35
Identities = 73/109 (66%), Positives = 92/109 (84%), Gaps = 1/109 (0%)
Frame = -1
Query: 831 AIKLFDDM-GSASKIPPNTVIYNILIDSLCKNIEVEDALYLMDDMKAKGVRPNTTTFNAM 655
A+K+F M +AS++ PN VIYNILIDSLC+N ++E AL LMDDM+ KGV+PNT T+NAM
Sbjct: 134 AMKIFKAMDAAASRVAPNNVIYNILIDSLCENNDIELALSLMDDMRVKGVKPNTGTYNAM 193
Query: 654 FKGLRDKNWLNKALILMDQMTEQACNPDYITMEILTDWLPTVGKTKKLQ 508
FKGLR++ WLN+AL LMD+M EQ CNPDYITMEILT+WL VG+T+KL+
Sbjct: 194 FKGLRERKWLNQALELMDRMMEQPCNPDYITMEILTEWLSAVGETEKLK 242