BLASTX nr result

ID: Panax21_contig00001961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001961
         (1393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283383.1| PREDICTED: scarecrow-like protein 14-like [V...   139   2e-30
gb|AFH54537.1| GRAS family protein, partial [Dimocarpus longan]       135   3e-29
ref|XP_002280790.1| PREDICTED: scarecrow-like protein 14-like [V...   124   6e-26
ref|XP_002533753.1| transcription factor, putative [Ricinus comm...   117   5e-24
ref|XP_002314171.1| GRAS family transcription factor [Populus tr...   117   5e-24

>ref|XP_002283383.1| PREDICTED: scarecrow-like protein 14-like [Vitis vinifera]
          Length = 764

 Score =  139 bits (350), Expect = 2e-30
 Identities = 98/251 (39%), Positives = 121/251 (48%), Gaps = 16/251 (6%)
 Frame = -2

Query: 1191 LNGFEFGDEIVLPSFDQSPNLVNGFKFKDES-LDLGFLDIXXXXXXXXXXXXXXXXXXXX 1015
            +NG EF  +  L   DQ PN  NGF F   S LDL FLD                     
Sbjct: 1    MNGIEFNGQAFLTGSDQYPNFENGFTFDAHSPLDLNFLD-HPFLPPDVNLGVFAQSSSLS 59

Query: 1014 XXXXXPDDNEFSDGVLKFLNHILMEEKFEEKPCMFHDPLALLAAEKSLYEVLGEKYPPSP 835
                  DD + SD  LK+++ +LMEE  E+K CMFHDPLA+ AAEKS Y+VLG + P   
Sbjct: 60   PDGDSSDDGDSSDSFLKYVSQVLMEENLEDKACMFHDPLAVQAAEKSFYDVLGGQNPTFR 119

Query: 834  YQTPVDVYQNVESLSD-----------YFVXXXXXXXXXXXXXXGNYVDPQWV---GDVD 697
             + PV V Q V+S  D           Y                 N  + QWV   GD +
Sbjct: 120  SEPPVHVDQVVDSPDDSVSGSSSDYGSYSSRINGTSNLQWSADAHNSANHQWVVDPGDRN 179

Query: 696  FKSSVAQNH-XXXXXXXXXXXXXXXXXXXSGNSFSNTVNGQLDSAVRTHLIPNIFSDSES 520
            +KSS  QN                     S +SFSN  NG +DS+ +T L+PNIFSDSES
Sbjct: 180  YKSSFLQNPLPENYVFGSALGSASPSSVTSSDSFSNIGNGVVDSSPKTVLVPNIFSDSES 239

Query: 519  ILQFQRGMEEA 487
            ILQF+RG+EEA
Sbjct: 240  ILQFKRGVEEA 250



 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 59/124 (47%), Positives = 71/124 (57%), Gaps = 13/124 (10%)
 Frame = -1

Query: 334 SPNSSRGRKHYHRQDSVIEDERSSKQSAVYVEEEAD-LSEMFDKVLLCGPCCDKEEPSDV 158
           SP   R RK+ HR D  +E+ R SK SAV +EE+ D LSEMFDKVLLC    DK EPS  
Sbjct: 292 SPKWLRRRKNLHRADIELEEGRRSKLSAVDLEEDDDELSEMFDKVLLCSD--DKAEPSYY 349

Query: 157 SPIGHHENDQTNG------------SNGGRNQTKKRGSKTEAVDLRTLLISCAQSVAADD 14
                 + D  NG            SNG + + +K+ S  E VD  TLLI CAQ+V+ADD
Sbjct: 350 CT---GDEDLHNGICNTWQVYGSAHSNGEKTRIRKQSSGKEVVDFGTLLIQCAQAVSADD 406

Query: 13  RRTA 2
            RTA
Sbjct: 407 HRTA 410


>gb|AFH54537.1| GRAS family protein, partial [Dimocarpus longan]
          Length = 288

 Score =  135 bits (339), Expect = 3e-29
 Identities = 91/251 (36%), Positives = 122/251 (48%), Gaps = 6/251 (2%)
 Frame = -2

Query: 1221 DPYFSEFSDALNGFEFGDEIVLPSFDQSPNLVNGFKFKDESLDLGFLD--IXXXXXXXXX 1048
            DP F+EF+ ++NGF    + V P+ ++  ++ N FKF D +LD  F+D  +         
Sbjct: 1    DPQFTEFNSSINGFNGERDTVFPNSNEYLDVANEFKFSDSNLDTSFVDDLLVTPERDSGF 60

Query: 1047 XXXXXXXXXXXXXXXXPDDNEFSDGVLKFLNHILMEEKFEEKPCMFHDPLALLAAEKSLY 868
                             DDN+FS+ VL ++N +LMEE  EEKPCMFHDPLAL A E+SLY
Sbjct: 61   SAQSFSLSPEGESSSPSDDNDFSETVLNYINQMLMEEDMEEKPCMFHDPLALQAKEQSLY 120

Query: 867  EVLGEKYPPSPYQTPVDVYQNVESLSDYF--VXXXXXXXXXXXXXXGNYVDPQWVGDV-D 697
            EVLGEK   SP Q P   + N ES  DYF                  + V+P W GD  +
Sbjct: 121  EVLGEKDSSSPDQLP---FYNTESPDDYFSSCFSDHGSNSSSSSGTNHLVEPFWNGDYGE 177

Query: 696  FKSSVAQNH-XXXXXXXXXXXXXXXXXXXSGNSFSNTVNGQLDSAVRTHLIPNIFSDSES 520
            F+ S+ Q                        N F+N  N    SA     IP++FS S+ 
Sbjct: 178  FRPSLLQMPIPSNFVFQSTAKSSSQTSDKFQNGFANNGNMFAVSAASELQIPDLFSQSDL 237

Query: 519  ILQFQRGMEEA 487
            + QF+RG EEA
Sbjct: 238  MSQFRRGEEEA 248


>ref|XP_002280790.1| PREDICTED: scarecrow-like protein 14-like [Vitis vinifera]
          Length = 760

 Score =  124 bits (311), Expect = 6e-26
 Identities = 97/265 (36%), Positives = 119/265 (44%), Gaps = 19/265 (7%)
 Frame = -2

Query: 1224 MDPYFSEFSDALNGFEFGDEIVLPSFDQSPNLVNGFKFKDES-LDLGFLDIXXXXXXXXX 1048
            MD     F D++N FE   +  L   DQ PN  NGFKF   S LD  FLD          
Sbjct: 1    MDSRLGGFVDSINDFELNGQAFLTDSDQFPNFENGFKFDSHSPLDFNFLD---RPVLPPD 57

Query: 1047 XXXXXXXXXXXXXXXXPDDNEFSDGVLKFLNHILMEEKFEEKPCMFHDPLALLAAEKSLY 868
                               +E  D  LK+++ +LMEE  E+K CMFHDPLAL AAE+S Y
Sbjct: 58   MNLGAFAPSSSLSPDGDSSDEGDDSFLKYVSQVLMEENLEDKACMFHDPLALQAAERSFY 117

Query: 867  EVLGEKYPPSPYQTPVDVYQNVE--------SLSDYFVXXXXXXXXXXXXXXGNYVDP-- 718
            EVLG + PPS  QT    +Q V+        S SDY                    DP  
Sbjct: 118  EVLGGQNPPSRNQT----HQIVDSPDDNAWSSFSDYSSYSSPSNGSSNSVNHQWITDPGN 173

Query: 717  ----QWV---GDVDFKSSVAQNHXXXXXXXXXXXXXXXXXXXSG-NSFSNTVNGQLDSAV 562
                QWV   GD+++KSS   N                    +  +SFS T N     A 
Sbjct: 174  STNHQWVVDPGDLNYKSSFLLNPLPENYVFSSTIGSGSQSSTNSFDSFSKTGN----EAP 229

Query: 561  RTHLIPNIFSDSESILQFQRGMEEA 487
               L+PNIFSDSES+LQF+RG+EEA
Sbjct: 230  SPVLVPNIFSDSESVLQFKRGVEEA 254



 Score = 85.5 bits (210), Expect = 3e-14
 Identities = 60/119 (50%), Positives = 73/119 (61%), Gaps = 8/119 (6%)
 Frame = -1

Query: 334 SPNSSRGRKHYHRQDSVIEDERSSKQSAVYVEEEAD-LSEMFDKVLLCGP-------CCD 179
           SP   RGRK+ HR+D  +E ERS KQSAV++EE+ D LSEMFD+VLLC          C 
Sbjct: 296 SPKWLRGRKNLHREDHELE-ERSRKQSAVHLEEDEDELSEMFDRVLLCSDPKAERSYYCT 354

Query: 178 KEEPSDVSPIGHHENDQTNGSNGGRNQTKKRGSKTEAVDLRTLLISCAQSVAADDRRTA 2
            EE  D + +   E+ Q   SN  + +TKK  S  E VDLRTLLI CAQ V+  D RTA
Sbjct: 355 GEE--DCNSLQQSEHPQ---SNAEKTRTKK--SSKEVVDLRTLLIHCAQVVSTYDLRTA 406


>ref|XP_002533753.1| transcription factor, putative [Ricinus communis]
            gi|223526341|gb|EEF28640.1| transcription factor,
            putative [Ricinus communis]
          Length = 764

 Score =  117 bits (294), Expect = 5e-24
 Identities = 88/262 (33%), Positives = 117/262 (44%), Gaps = 14/262 (5%)
 Frame = -2

Query: 1230 MCMDPYFSEFSDALNGFEFGDEIVLPSFDQSPNLVNGFKFKDESLDL--GFLDIXXXXXX 1057
            M  D  F+EFS    G +F DEI  P   Q P   NG+K  D + D+   F+D       
Sbjct: 1    MGTDAGFAEFS----GLKFEDEIDFPDLHQYPTFTNGYKSNDPTFDIDFNFVDTSLVLLD 56

Query: 1056 XXXXXXXXXXXXXXXXXXXPDDNEFSDGVLKFLNHILMEEKFEEKPCMFHDPLALLAAEK 877
                                DDN+FS+ VL +++ +LMEE  E+KPCMFHDPLAL AAE+
Sbjct: 57   SDPSRSAPSSVATMEGDSPSDDNDFSETVLNYISQMLMEEDMEQKPCMFHDPLALQAAER 116

Query: 876  SLYEVLGEKYPPSPYQTP-------VDVYQNVES--LSDYFVXXXXXXXXXXXXXXGNYV 724
            SLY+VLGEKYP SP Q+        VD   +  S  LSDY                 +  
Sbjct: 117  SLYDVLGEKYPSSPNQSSSFGDQFLVDSPDDGLSSRLSDY------SSNSSSGSNTSSSA 170

Query: 723  DPQWVGDV--DFKSSVAQNH-XXXXXXXXXXXXXXXXXXXSGNSFSNTVNGQLDSAVRTH 553
            + QW+     + K +  Q                        N  +N  +  + S     
Sbjct: 171  EQQWINGEFGECKPAFLQTPLPTNFVFQSSANSSSQQPLKLKNGLANNAHDVMGSFESKI 230

Query: 552  LIPNIFSDSESILQFQRGMEEA 487
            ++PN FS+ E  LQFQRG+EEA
Sbjct: 231  VVPNFFSERELALQFQRGVEEA 252



 Score =  112 bits (279), Expect = 3e-22
 Identities = 66/121 (54%), Positives = 86/121 (71%), Gaps = 10/121 (8%)
 Frame = -1

Query: 334 SPNSSRGRKHYHRQDSVIEDERSSKQSAVYVEEEADLSEMFDKVLLC--GPCCDKEEP-- 167
           SP S +GRK+  R+D   ++ERS+KQSAVYV+E  +L+EMFDKVL+C  G C     P  
Sbjct: 294 SPISVKGRKNREREDDDFDEERSNKQSAVYVDE-TELAEMFDKVLVCTGGGC---RPPGC 349

Query: 166 --SDVSPIGHH----ENDQTNGSNGGRNQTKKRGSKTEAVDLRTLLISCAQSVAADDRRT 5
             SD S  G +    +N QTNGSNGG+ + K++G+K E VDLRTLLI CAQ+V++DDRRT
Sbjct: 350 ILSDSSQSGSNKALQQNGQTNGSNGGKARAKRQGNKKEVVDLRTLLILCAQAVSSDDRRT 409

Query: 4   A 2
           A
Sbjct: 410 A 410


>ref|XP_002314171.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222850579|gb|EEE88126.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 794

 Score =  117 bits (294), Expect = 5e-24
 Identities = 62/113 (54%), Positives = 83/113 (73%), Gaps = 2/113 (1%)
 Frame = -1

Query: 334 SPNSSRGRKHYHRQDSVIEDERSSKQSAVYVEEEADLSEMFDKVLLC--GPCCDKEEPSD 161
           SPN SRGRK++ R+DS  E+ RS+KQSAVYVEE  +LSEMFDKVLL   G CC  +   +
Sbjct: 325 SPNGSRGRKNHEREDSDPEEGRSNKQSAVYVEE-GELSEMFDKVLLWTGGQCCGNDADQE 383

Query: 160 VSPIGHHENDQTNGSNGGRNQTKKRGSKTEAVDLRTLLISCAQSVAADDRRTA 2
           V       ++Q+NGS+GG+N+ K++  + E VDLRTLLI CAQ+++A+D RTA
Sbjct: 384 VGCKSLQPDEQSNGSSGGKNRAKRQNKRMETVDLRTLLIICAQAISANDFRTA 436



 Score = 84.3 bits (207), Expect = 7e-14
 Identities = 72/286 (25%), Positives = 111/286 (38%), Gaps = 38/286 (13%)
 Frame = -2

Query: 1230 MCMDPYFSEFSDALNGFEFGDEIVLPSFDQSPNLVNGFKFKDESLDLGFLDIXXXXXXXX 1051
            M MD  ++  SD  N  +F + I+  + DQ P + +G +F   S DL F+++        
Sbjct: 1    MVMDRNYTGLSDYQNDSKFDETIMFSNSDQYPVIEHGLEFNTPSPDLSFINLDSDPDSFG 60

Query: 1050 XXXXXXXXXXXXXXXXXP-----------------------DDNEFSDGVLKFLNHILME 940
                                                     +D++ +D +LK+++ +LME
Sbjct: 61   LSFNLNPAGESSVPSMSLSPDGGLLDPSTGLSPEAEASSPSEDSDSTDPLLKYISQMLME 120

Query: 939  EKFEEKPCMFHDPLALLAAEKSLYEVLGEKYPP-----SPYQTPVDVYQNVESLSDYFVX 775
            E  +++P MFHD  AL A EKSLY+ LGE+YPP       Y        N+      F  
Sbjct: 121  ENMKDQPHMFHDHFALSATEKSLYDALGEQYPPPLNSSQSYLNHESPDSNISGTGSNFGD 180

Query: 774  XXXXXXXXXXXXXGNYVD----PQWVGDVDFKSSVAQNHXXXXXXXXXXXXXXXXXXXSG 607
                             D    PQWVG     + V  ++                     
Sbjct: 181  NTSSSNGISTVTSSFTTDFSKEPQWVGG---DADVGGSNPSFQRISLLGDNHLQSNLRPN 237

Query: 606  NSFSNTVNGQLDS------AVRTHLIPNIFSDSESILQFQRGMEEA 487
              FS +  G  DS      +    ++ N+FSD ES+LQF++G+EEA
Sbjct: 238  MQFSASPYGFTDSRDSLMGSSAGEMVQNMFSDMESVLQFKKGLEEA 283


Top