BLASTX nr result

ID: Panax21_contig00001954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001954
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516123.1| 40S ribosomal protein S3, putative [Ricinus ...    60   1e-14
ref|XP_002279950.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis...    60   1e-14
ref|XP_002514061.1| 40S ribosomal protein S3, putative [Ricinus ...    60   1e-14
gb|ABK23996.1| unknown [Picea sitchensis] gi|116793880|gb|ABK269...    60   1e-14
gb|ABK23152.1| unknown [Picea sitchensis] gi|116792247|gb|ABK262...    60   1e-14

>ref|XP_002516123.1| 40S ribosomal protein S3, putative [Ricinus communis]
           gi|223544609|gb|EEF46125.1| 40S ribosomal protein S3,
           putative [Ricinus communis]
          Length = 234

 Score = 60.1 bits (144), Expect(2) = 1e-14
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = -1

Query: 136 SKGMQVNVSGKLRAQRAKSMKFKDGYMISSGQP 38
           +KG +V VSGKLRAQRAKSMKFKDGYMISSGQP
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQP 163



 Score = 44.3 bits (103), Expect(2) = 1e-14
 Identities = 19/20 (95%), Positives = 19/20 (95%)
 Frame = -2

Query: 183 VRRACYGVLRFIMEGGAKGC 124
           VRRACYGVLRFIME GAKGC
Sbjct: 115 VRRACYGVLRFIMESGAKGC 134


>ref|XP_002279950.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis vinifera]
           gi|297738588|emb|CBI27833.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score = 60.1 bits (144), Expect(2) = 1e-14
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = -1

Query: 136 SKGMQVNVSGKLRAQRAKSMKFKDGYMISSGQP 38
           +KG +V VSGKLRAQRAKSMKFKDGYMISSGQP
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQP 163



 Score = 44.3 bits (103), Expect(2) = 1e-14
 Identities = 19/20 (95%), Positives = 19/20 (95%)
 Frame = -2

Query: 183 VRRACYGVLRFIMEGGAKGC 124
           VRRACYGVLRFIME GAKGC
Sbjct: 115 VRRACYGVLRFIMESGAKGC 134


>ref|XP_002514061.1| 40S ribosomal protein S3, putative [Ricinus communis]
           gi|223546517|gb|EEF48015.1| 40S ribosomal protein S3,
           putative [Ricinus communis]
          Length = 233

 Score = 60.1 bits (144), Expect(2) = 1e-14
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = -1

Query: 136 SKGMQVNVSGKLRAQRAKSMKFKDGYMISSGQP 38
           +KG +V VSGKLRAQRAKSMKFKDGYMISSGQP
Sbjct: 132 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQP 164



 Score = 44.3 bits (103), Expect(2) = 1e-14
 Identities = 19/20 (95%), Positives = 19/20 (95%)
 Frame = -2

Query: 183 VRRACYGVLRFIMEGGAKGC 124
           VRRACYGVLRFIME GAKGC
Sbjct: 116 VRRACYGVLRFIMESGAKGC 135


>gb|ABK23996.1| unknown [Picea sitchensis] gi|116793880|gb|ABK26916.1| unknown
           [Picea sitchensis]
          Length = 233

 Score = 60.1 bits (144), Expect(2) = 1e-14
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = -1

Query: 136 SKGMQVNVSGKLRAQRAKSMKFKDGYMISSGQP 38
           +KG +V VSGKLRAQRAKSMKFKDGYMISSGQP
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQP 163



 Score = 44.3 bits (103), Expect(2) = 1e-14
 Identities = 19/20 (95%), Positives = 19/20 (95%)
 Frame = -2

Query: 183 VRRACYGVLRFIMEGGAKGC 124
           VRRACYGVLRFIME GAKGC
Sbjct: 115 VRRACYGVLRFIMESGAKGC 134


>gb|ABK23152.1| unknown [Picea sitchensis] gi|116792247|gb|ABK26290.1| unknown
           [Picea sitchensis]
          Length = 233

 Score = 60.1 bits (144), Expect(2) = 1e-14
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = -1

Query: 136 SKGMQVNVSGKLRAQRAKSMKFKDGYMISSGQP 38
           +KG +V VSGKLRAQRAKSMKFKDGYMISSGQP
Sbjct: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQP 163



 Score = 44.3 bits (103), Expect(2) = 1e-14
 Identities = 19/20 (95%), Positives = 19/20 (95%)
 Frame = -2

Query: 183 VRRACYGVLRFIMEGGAKGC 124
           VRRACYGVLRFIME GAKGC
Sbjct: 115 VRRACYGVLRFIMESGAKGC 134


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