BLASTX nr result

ID: Panax21_contig00001938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001938
         (1021 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77176.1| hypothetical protein VITISV_038217 [Vitis vinifera]    47   3e-11
ref|XP_003635591.1| PREDICTED: uncharacterized protein LOC100854...    47   3e-11
ref|XP_002514738.1| conserved hypothetical protein [Ricinus comm...    45   1e-09
ref|XP_004138173.1| PREDICTED: uncharacterized protein LOC101223...    45   4e-09
ref|XP_002317978.1| predicted protein [Populus trichocarpa] gi|2...    43   1e-08

>emb|CAN77176.1| hypothetical protein VITISV_038217 [Vitis vinifera]
          Length = 209

 Score = 46.6 bits (109), Expect(3) = 3e-11
 Identities = 19/24 (79%), Positives = 20/24 (83%)
 Frame = -2

Query: 480 DPYFDS*QYRTYGGDGTWHWVYEK 409
           DPY+DS QYR  GGDGT HWVYEK
Sbjct: 149 DPYYDSEQYRKDGGDGTGHWVYEK 172



 Score = 38.9 bits (89), Expect(3) = 3e-11
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -3

Query: 632 TFYIMFTYWGCYFFGATK 579
           TFYIMFT WGC FFG+TK
Sbjct: 131 TFYIMFTCWGCCFFGSTK 148



 Score = 28.9 bits (63), Expect(3) = 3e-11
 Identities = 16/29 (55%), Positives = 17/29 (58%)
 Frame = -1

Query: 301 QEDIEESGRAXXXXXXXXXXXEQKVGGLR 215
           QEDIEE+ RA           EQKVGGLR
Sbjct: 173 QEDIEEAARAELWREELIEEIEQKVGGLR 201


>ref|XP_003635591.1| PREDICTED: uncharacterized protein LOC100854331 [Vitis vinifera]
           gi|359497642|ref|XP_003635595.1| PREDICTED:
           uncharacterized protein LOC100854601 [Vitis vinifera]
           gi|296087032|emb|CBI33296.3| unnamed protein product
           [Vitis vinifera] gi|296088957|emb|CBI38523.3| unnamed
           protein product [Vitis vinifera]
          Length = 181

 Score = 46.6 bits (109), Expect(3) = 3e-11
 Identities = 19/24 (79%), Positives = 20/24 (83%)
 Frame = -2

Query: 480 DPYFDS*QYRTYGGDGTWHWVYEK 409
           DPY+DS QYR  GGDGT HWVYEK
Sbjct: 121 DPYYDSEQYRKDGGDGTGHWVYEK 144



 Score = 38.9 bits (89), Expect(3) = 3e-11
 Identities = 15/18 (83%), Positives = 16/18 (88%)
 Frame = -3

Query: 632 TFYIMFTYWGCYFFGATK 579
           TFYIMFT WGC FFG+TK
Sbjct: 103 TFYIMFTCWGCCFFGSTK 120



 Score = 28.9 bits (63), Expect(3) = 3e-11
 Identities = 16/29 (55%), Positives = 17/29 (58%)
 Frame = -1

Query: 301 QEDIEESGRAXXXXXXXXXXXEQKVGGLR 215
           QEDIEE+ RA           EQKVGGLR
Sbjct: 145 QEDIEEAARAELWREELIEEIEQKVGGLR 173


>ref|XP_002514738.1| conserved hypothetical protein [Ricinus communis]
           gi|223546342|gb|EEF47844.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 182

 Score = 44.7 bits (104), Expect(3) = 1e-09
 Identities = 20/34 (58%), Positives = 25/34 (73%)
 Frame = -2

Query: 510 LFL*TMKMV*DPYFDS*QYRTYGGDGTWHWVYEK 409
           LF  +MK   DP++DS +YR  GGDGT HW+YEK
Sbjct: 115 LFFGSMK---DPFYDSEEYRKDGGDGTGHWIYEK 145



 Score = 34.3 bits (77), Expect(3) = 1e-09
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -3

Query: 629 FYIMFTYWGCYFFGATK 579
           FY+MFT WGC FFG+ K
Sbjct: 105 FYLMFTCWGCLFFGSMK 121



 Score = 30.0 bits (66), Expect(3) = 1e-09
 Identities = 17/29 (58%), Positives = 17/29 (58%)
 Frame = -1

Query: 301 QEDIEESGRAXXXXXXXXXXXEQKVGGLR 215
           QEDIEES RA           EQKVGGLR
Sbjct: 146 QEDIEESARAELWREELIEEIEQKVGGLR 174


>ref|XP_004138173.1| PREDICTED: uncharacterized protein LOC101223170 [Cucumis sativus]
           gi|449477229|ref|XP_004154966.1| PREDICTED:
           uncharacterized protein LOC101226186 [Cucumis sativus]
          Length = 177

 Score = 45.1 bits (105), Expect(3) = 4e-09
 Identities = 22/34 (64%), Positives = 24/34 (70%)
 Frame = -2

Query: 510 LFL*TMKMV*DPYFDS*QYRTYGGDGTWHWVYEK 409
           LF  +MK   DPY+DS  YR  GGDGT HWVYEK
Sbjct: 110 LFFGSMK---DPYYDSEVYRKDGGDGTGHWVYEK 140



 Score = 33.1 bits (74), Expect(3) = 4e-09
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = -3

Query: 632 TFYIMFTYWGCYFFGATK 579
           + YIMFT WGC FFG+ K
Sbjct: 99  SLYIMFTCWGCLFFGSMK 116



 Score = 28.9 bits (63), Expect(3) = 4e-09
 Identities = 16/29 (55%), Positives = 17/29 (58%)
 Frame = -1

Query: 301 QEDIEESGRAXXXXXXXXXXXEQKVGGLR 215
           QEDIEE+ RA           EQKVGGLR
Sbjct: 141 QEDIEEAARADLWREELIEEIEQKVGGLR 169


>ref|XP_002317978.1| predicted protein [Populus trichocarpa] gi|222858651|gb|EEE96198.1|
           predicted protein [Populus trichocarpa]
          Length = 180

 Score = 42.7 bits (99), Expect(3) = 1e-08
 Identities = 20/34 (58%), Positives = 24/34 (70%)
 Frame = -2

Query: 510 LFL*TMKMV*DPYFDS*QYRTYGGDGTWHWVYEK 409
           LF  +MK   DPY+DS  YR  GGDG+ HWVY+K
Sbjct: 113 LFFGSMK---DPYYDSEAYRKDGGDGSGHWVYDK 143



 Score = 34.3 bits (77), Expect(3) = 1e-08
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -3

Query: 629 FYIMFTYWGCYFFGATK 579
           FY+MFT WGC FFG+ K
Sbjct: 103 FYLMFTCWGCLFFGSMK 119



 Score = 28.9 bits (63), Expect(3) = 1e-08
 Identities = 16/29 (55%), Positives = 17/29 (58%)
 Frame = -1

Query: 301 QEDIEESGRAXXXXXXXXXXXEQKVGGLR 215
           Q+DIEES RA           EQKVGGLR
Sbjct: 144 QDDIEESARAELWREELIEEIEQKVGGLR 172


Top