BLASTX nr result
ID: Panax21_contig00001896
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00001896
(613 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002300175.1| predicted protein [Populus trichocarpa] gi|2... 223 3e-56
ref|XP_002879409.1| hypothetical protein ARALYDRAFT_482209 [Arab... 216 2e-54
gb|AAP82172.1| 26S proteasome subunit RPN2A [synthetic construct] 215 4e-54
dbj|BAD93983.1| 26S proteasome regulatory subunit [Arabidopsis t... 215 4e-54
gb|AAP86657.1| 26S proteasome subunit RPN2a [Arabidopsis thaliana] 215 4e-54
>ref|XP_002300175.1| predicted protein [Populus trichocarpa] gi|222847433|gb|EEE84980.1|
predicted protein [Populus trichocarpa]
Length = 1004
Score = 223 bits (567), Expect = 3e-56
Identities = 123/205 (60%), Positives = 136/205 (66%), Gaps = 5/205 (2%)
Frame = +1
Query: 1 KHDKITAVVGLAVFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFVSHAKPSLFE 180
KHDKITAVVGLAVFSQFWYWYPLIYFISL+FSPTA IGLNYDLKVP+FEFVS+AKPSLFE
Sbjct: 767 KHDKITAVVGLAVFSQFWYWYPLIYFISLAFSPTAFIGLNYDLKVPKFEFVSNAKPSLFE 826
Query: 181 YXXXXXXXXXXXXXXXXXXXLSTXXXXXXXXXXXEADQKAIA-----XXXXXXXXXXXXX 345
Y LST EADQKA A
Sbjct: 827 YPKPTTVPTATSAVKLPAAVLST-SVKAKARAKKEADQKATAEKAAGVESSPASTSAGKG 885
Query: 346 XXXXXXXXXXMQVDNPVEKKAEPEPSFEILTNPARVVPAQEKFIQFLEESRYTPIKSATS 525
MQVD EKKAEPEPS EILTNPARVVPAQEKFI+F+E+SRY P+KSA S
Sbjct: 886 KAPSEKDGDAMQVDGQPEKKAEPEPSHEILTNPARVVPAQEKFIKFMEDSRYVPVKSAPS 945
Query: 526 GFVLLKDLRPAMPEVLSLSDAPTAS 600
GFVLL+DL+P PEVLSL+D P+++
Sbjct: 946 GFVLLRDLQPTEPEVLSLTDTPSSA 970
>ref|XP_002879409.1| hypothetical protein ARALYDRAFT_482209 [Arabidopsis lyrata subsp.
lyrata] gi|297325248|gb|EFH55668.1| hypothetical protein
ARALYDRAFT_482209 [Arabidopsis lyrata subsp. lyrata]
Length = 1002
Score = 216 bits (551), Expect = 2e-54
Identities = 123/208 (59%), Positives = 138/208 (66%), Gaps = 8/208 (3%)
Frame = +1
Query: 1 KHDKITAVVGLAVFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFVSHAKPSLFE 180
KHDK+TAV+GLAVFSQFWYWYPLIYFISL+FSPTA IGLNYDLKVP+FEF+SHAKPSLFE
Sbjct: 763 KHDKVTAVIGLAVFSQFWYWYPLIYFISLAFSPTAFIGLNYDLKVPKFEFMSHAKPSLFE 822
Query: 181 YXXXXXXXXXXXXXXXXXXXLSTXXXXXXXXXXXEADQKAIA-----XXXXXXXXXXXXX 345
Y LST EA+QKAIA
Sbjct: 823 YPKPTTVPTANTAVKLPTAVLST-SVKAKARAKKEAEQKAIAEKTSGPEKPVNESGSGKG 881
Query: 346 XXXXXXXXXXMQVDNP--VEKK-AEPEPSFEILTNPARVVPAQEKFIQFLEESRYTPIKS 516
MQVD+P VEKK AEPEP+FEIL NPARVVPAQEK+I+ LE+SRY P+K
Sbjct: 882 KASTEKEGDSMQVDSPAAVEKKAAEPEPAFEILVNPARVVPAQEKYIKLLEDSRYVPVKL 941
Query: 517 ATSGFVLLKDLRPAMPEVLSLSDAPTAS 600
A SGFVLLKDLR PEVLSL+DAPT++
Sbjct: 942 APSGFVLLKDLRQHEPEVLSLTDAPTST 969
>gb|AAP82172.1| 26S proteasome subunit RPN2A [synthetic construct]
Length = 1000
Score = 215 bits (548), Expect = 4e-54
Identities = 122/208 (58%), Positives = 138/208 (66%), Gaps = 8/208 (3%)
Frame = +1
Query: 1 KHDKITAVVGLAVFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFVSHAKPSLFE 180
KHDK+TAV+GLAVFSQFWYWYPLIYFISL+FSPTA IGLNYDLKVP+FEF+SHAKPSLFE
Sbjct: 762 KHDKVTAVIGLAVFSQFWYWYPLIYFISLAFSPTAFIGLNYDLKVPKFEFMSHAKPSLFE 821
Query: 181 YXXXXXXXXXXXXXXXXXXXLSTXXXXXXXXXXXEADQKAIA-----XXXXXXXXXXXXX 345
Y LST EA+QKAIA
Sbjct: 822 YPKPTTVPTANTAVKLPTAVLST-SVKAKARAKKEAEQKAIAEKTSGPEKPVNESGSGKG 880
Query: 346 XXXXXXXXXXMQVDNP--VEKKA-EPEPSFEILTNPARVVPAQEKFIQFLEESRYTPIKS 516
MQVD+P VEKKA EPEP+FEIL NPARVVPAQEK+I+ L++SRY P+K
Sbjct: 881 KASTEKEGDSMQVDSPAAVEKKAPEPEPAFEILVNPARVVPAQEKYIKLLDDSRYVPVKL 940
Query: 517 ATSGFVLLKDLRPAMPEVLSLSDAPTAS 600
A SGFVLLKDLR PEVLSL+DAPT++
Sbjct: 941 APSGFVLLKDLREHEPEVLSLTDAPTST 968
>dbj|BAD93983.1| 26S proteasome regulatory subunit [Arabidopsis thaliana]
Length = 265
Score = 215 bits (548), Expect = 4e-54
Identities = 122/208 (58%), Positives = 138/208 (66%), Gaps = 8/208 (3%)
Frame = +1
Query: 1 KHDKITAVVGLAVFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFVSHAKPSLFE 180
KHDK+TAV+GLAVFSQFWYWYPLIYFISL+FSPTA IGLNYDLKVP+FEF+SHAKPSLFE
Sbjct: 24 KHDKVTAVIGLAVFSQFWYWYPLIYFISLAFSPTAFIGLNYDLKVPKFEFMSHAKPSLFE 83
Query: 181 YXXXXXXXXXXXXXXXXXXXLSTXXXXXXXXXXXEADQKAIA-----XXXXXXXXXXXXX 345
Y LST EA+QKAIA
Sbjct: 84 YPKPTTVPTANTAVKLPTAVLST-SVKAKARAKKEAEQKAIAEKTSGPEKPVNESGSGKG 142
Query: 346 XXXXXXXXXXMQVDNP--VEKKA-EPEPSFEILTNPARVVPAQEKFIQFLEESRYTPIKS 516
MQVD+P VEKKA EPEP+FEIL NPARVVPAQEK+I+ L++SRY P+K
Sbjct: 143 KASTEKEGDSMQVDSPAAVEKKAPEPEPAFEILVNPARVVPAQEKYIKLLDDSRYVPVKL 202
Query: 517 ATSGFVLLKDLRPAMPEVLSLSDAPTAS 600
A SGFVLLKDLR PEVLSL+DAPT++
Sbjct: 203 APSGFVLLKDLREHEPEVLSLTDAPTST 230
>gb|AAP86657.1| 26S proteasome subunit RPN2a [Arabidopsis thaliana]
Length = 1004
Score = 215 bits (548), Expect = 4e-54
Identities = 122/208 (58%), Positives = 138/208 (66%), Gaps = 8/208 (3%)
Frame = +1
Query: 1 KHDKITAVVGLAVFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFVSHAKPSLFE 180
KHDK+TAV+GLAVFSQFWYWYPLIYFISL+FSPTA IGLNYDLKVP+FEF+SHAKPSLFE
Sbjct: 763 KHDKVTAVIGLAVFSQFWYWYPLIYFISLAFSPTAFIGLNYDLKVPKFEFMSHAKPSLFE 822
Query: 181 YXXXXXXXXXXXXXXXXXXXLSTXXXXXXXXXXXEADQKAIA-----XXXXXXXXXXXXX 345
Y LST EA+QKAIA
Sbjct: 823 YPKPTTVPIANTAVKLPTAVLST-SVKAKARAKKEAEQKAIAEKTSGPEKPVNESGSGKG 881
Query: 346 XXXXXXXXXXMQVDNP--VEKKA-EPEPSFEILTNPARVVPAQEKFIQFLEESRYTPIKS 516
MQVD+P VEKKA EPEP+FEIL NPARVVPAQEK+I+ L++SRY P+K
Sbjct: 882 KASTEKEGDSMQVDSPAAVEKKAPEPEPAFEILVNPARVVPAQEKYIKLLDDSRYVPVKL 941
Query: 517 ATSGFVLLKDLRPAMPEVLSLSDAPTAS 600
A SGFVLLKDLR PEVLSL+DAPT++
Sbjct: 942 APSGFVLLKDLREHEPEVLSLTDAPTST 969