BLASTX nr result
ID: Panax21_contig00001896
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00001896 (613 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002300175.1| predicted protein [Populus trichocarpa] gi|2... 223 3e-56 ref|XP_002879409.1| hypothetical protein ARALYDRAFT_482209 [Arab... 216 2e-54 gb|AAP82172.1| 26S proteasome subunit RPN2A [synthetic construct] 215 4e-54 dbj|BAD93983.1| 26S proteasome regulatory subunit [Arabidopsis t... 215 4e-54 gb|AAP86657.1| 26S proteasome subunit RPN2a [Arabidopsis thaliana] 215 4e-54 >ref|XP_002300175.1| predicted protein [Populus trichocarpa] gi|222847433|gb|EEE84980.1| predicted protein [Populus trichocarpa] Length = 1004 Score = 223 bits (567), Expect = 3e-56 Identities = 123/205 (60%), Positives = 136/205 (66%), Gaps = 5/205 (2%) Frame = +1 Query: 1 KHDKITAVVGLAVFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFVSHAKPSLFE 180 KHDKITAVVGLAVFSQFWYWYPLIYFISL+FSPTA IGLNYDLKVP+FEFVS+AKPSLFE Sbjct: 767 KHDKITAVVGLAVFSQFWYWYPLIYFISLAFSPTAFIGLNYDLKVPKFEFVSNAKPSLFE 826 Query: 181 YXXXXXXXXXXXXXXXXXXXLSTXXXXXXXXXXXEADQKAIA-----XXXXXXXXXXXXX 345 Y LST EADQKA A Sbjct: 827 YPKPTTVPTATSAVKLPAAVLST-SVKAKARAKKEADQKATAEKAAGVESSPASTSAGKG 885 Query: 346 XXXXXXXXXXMQVDNPVEKKAEPEPSFEILTNPARVVPAQEKFIQFLEESRYTPIKSATS 525 MQVD EKKAEPEPS EILTNPARVVPAQEKFI+F+E+SRY P+KSA S Sbjct: 886 KAPSEKDGDAMQVDGQPEKKAEPEPSHEILTNPARVVPAQEKFIKFMEDSRYVPVKSAPS 945 Query: 526 GFVLLKDLRPAMPEVLSLSDAPTAS 600 GFVLL+DL+P PEVLSL+D P+++ Sbjct: 946 GFVLLRDLQPTEPEVLSLTDTPSSA 970 >ref|XP_002879409.1| hypothetical protein ARALYDRAFT_482209 [Arabidopsis lyrata subsp. lyrata] gi|297325248|gb|EFH55668.1| hypothetical protein ARALYDRAFT_482209 [Arabidopsis lyrata subsp. lyrata] Length = 1002 Score = 216 bits (551), Expect = 2e-54 Identities = 123/208 (59%), Positives = 138/208 (66%), Gaps = 8/208 (3%) Frame = +1 Query: 1 KHDKITAVVGLAVFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFVSHAKPSLFE 180 KHDK+TAV+GLAVFSQFWYWYPLIYFISL+FSPTA IGLNYDLKVP+FEF+SHAKPSLFE Sbjct: 763 KHDKVTAVIGLAVFSQFWYWYPLIYFISLAFSPTAFIGLNYDLKVPKFEFMSHAKPSLFE 822 Query: 181 YXXXXXXXXXXXXXXXXXXXLSTXXXXXXXXXXXEADQKAIA-----XXXXXXXXXXXXX 345 Y LST EA+QKAIA Sbjct: 823 YPKPTTVPTANTAVKLPTAVLST-SVKAKARAKKEAEQKAIAEKTSGPEKPVNESGSGKG 881 Query: 346 XXXXXXXXXXMQVDNP--VEKK-AEPEPSFEILTNPARVVPAQEKFIQFLEESRYTPIKS 516 MQVD+P VEKK AEPEP+FEIL NPARVVPAQEK+I+ LE+SRY P+K Sbjct: 882 KASTEKEGDSMQVDSPAAVEKKAAEPEPAFEILVNPARVVPAQEKYIKLLEDSRYVPVKL 941 Query: 517 ATSGFVLLKDLRPAMPEVLSLSDAPTAS 600 A SGFVLLKDLR PEVLSL+DAPT++ Sbjct: 942 APSGFVLLKDLRQHEPEVLSLTDAPTST 969 >gb|AAP82172.1| 26S proteasome subunit RPN2A [synthetic construct] Length = 1000 Score = 215 bits (548), Expect = 4e-54 Identities = 122/208 (58%), Positives = 138/208 (66%), Gaps = 8/208 (3%) Frame = +1 Query: 1 KHDKITAVVGLAVFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFVSHAKPSLFE 180 KHDK+TAV+GLAVFSQFWYWYPLIYFISL+FSPTA IGLNYDLKVP+FEF+SHAKPSLFE Sbjct: 762 KHDKVTAVIGLAVFSQFWYWYPLIYFISLAFSPTAFIGLNYDLKVPKFEFMSHAKPSLFE 821 Query: 181 YXXXXXXXXXXXXXXXXXXXLSTXXXXXXXXXXXEADQKAIA-----XXXXXXXXXXXXX 345 Y LST EA+QKAIA Sbjct: 822 YPKPTTVPTANTAVKLPTAVLST-SVKAKARAKKEAEQKAIAEKTSGPEKPVNESGSGKG 880 Query: 346 XXXXXXXXXXMQVDNP--VEKKA-EPEPSFEILTNPARVVPAQEKFIQFLEESRYTPIKS 516 MQVD+P VEKKA EPEP+FEIL NPARVVPAQEK+I+ L++SRY P+K Sbjct: 881 KASTEKEGDSMQVDSPAAVEKKAPEPEPAFEILVNPARVVPAQEKYIKLLDDSRYVPVKL 940 Query: 517 ATSGFVLLKDLRPAMPEVLSLSDAPTAS 600 A SGFVLLKDLR PEVLSL+DAPT++ Sbjct: 941 APSGFVLLKDLREHEPEVLSLTDAPTST 968 >dbj|BAD93983.1| 26S proteasome regulatory subunit [Arabidopsis thaliana] Length = 265 Score = 215 bits (548), Expect = 4e-54 Identities = 122/208 (58%), Positives = 138/208 (66%), Gaps = 8/208 (3%) Frame = +1 Query: 1 KHDKITAVVGLAVFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFVSHAKPSLFE 180 KHDK+TAV+GLAVFSQFWYWYPLIYFISL+FSPTA IGLNYDLKVP+FEF+SHAKPSLFE Sbjct: 24 KHDKVTAVIGLAVFSQFWYWYPLIYFISLAFSPTAFIGLNYDLKVPKFEFMSHAKPSLFE 83 Query: 181 YXXXXXXXXXXXXXXXXXXXLSTXXXXXXXXXXXEADQKAIA-----XXXXXXXXXXXXX 345 Y LST EA+QKAIA Sbjct: 84 YPKPTTVPTANTAVKLPTAVLST-SVKAKARAKKEAEQKAIAEKTSGPEKPVNESGSGKG 142 Query: 346 XXXXXXXXXXMQVDNP--VEKKA-EPEPSFEILTNPARVVPAQEKFIQFLEESRYTPIKS 516 MQVD+P VEKKA EPEP+FEIL NPARVVPAQEK+I+ L++SRY P+K Sbjct: 143 KASTEKEGDSMQVDSPAAVEKKAPEPEPAFEILVNPARVVPAQEKYIKLLDDSRYVPVKL 202 Query: 517 ATSGFVLLKDLRPAMPEVLSLSDAPTAS 600 A SGFVLLKDLR PEVLSL+DAPT++ Sbjct: 203 APSGFVLLKDLREHEPEVLSLTDAPTST 230 >gb|AAP86657.1| 26S proteasome subunit RPN2a [Arabidopsis thaliana] Length = 1004 Score = 215 bits (548), Expect = 4e-54 Identities = 122/208 (58%), Positives = 138/208 (66%), Gaps = 8/208 (3%) Frame = +1 Query: 1 KHDKITAVVGLAVFSQFWYWYPLIYFISLSFSPTALIGLNYDLKVPRFEFVSHAKPSLFE 180 KHDK+TAV+GLAVFSQFWYWYPLIYFISL+FSPTA IGLNYDLKVP+FEF+SHAKPSLFE Sbjct: 763 KHDKVTAVIGLAVFSQFWYWYPLIYFISLAFSPTAFIGLNYDLKVPKFEFMSHAKPSLFE 822 Query: 181 YXXXXXXXXXXXXXXXXXXXLSTXXXXXXXXXXXEADQKAIA-----XXXXXXXXXXXXX 345 Y LST EA+QKAIA Sbjct: 823 YPKPTTVPIANTAVKLPTAVLST-SVKAKARAKKEAEQKAIAEKTSGPEKPVNESGSGKG 881 Query: 346 XXXXXXXXXXMQVDNP--VEKKA-EPEPSFEILTNPARVVPAQEKFIQFLEESRYTPIKS 516 MQVD+P VEKKA EPEP+FEIL NPARVVPAQEK+I+ L++SRY P+K Sbjct: 882 KASTEKEGDSMQVDSPAAVEKKAPEPEPAFEILVNPARVVPAQEKYIKLLDDSRYVPVKL 941 Query: 517 ATSGFVLLKDLRPAMPEVLSLSDAPTAS 600 A SGFVLLKDLR PEVLSL+DAPT++ Sbjct: 942 APSGFVLLKDLREHEPEVLSLTDAPTST 969