BLASTX nr result
ID: Panax21_contig00001895
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00001895
(998 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004138958.1| PREDICTED: 26S proteasome non-ATPase regulat... 291 2e-76
ref|NP_171973.1| 26S proteasome regulatory subunit N2 [Arabidops... 290 5e-76
ref|XP_002889525.1| hypothetical protein ARALYDRAFT_470466 [Arab... 290 5e-76
ref|XP_002879409.1| hypothetical protein ARALYDRAFT_482209 [Arab... 290 5e-76
gb|AAP73043.1| 26S proteasome subunit RPN2b [Arabidopsis thaliana] 290 5e-76
>ref|XP_004138958.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 1-like
[Cucumis sativus] gi|449526720|ref|XP_004170361.1|
PREDICTED: 26S proteasome non-ATPase regulatory subunit
1-like [Cucumis sativus]
Length = 1002
Score = 291 bits (745), Expect = 2e-76
Identities = 153/155 (98%), Positives = 155/155 (100%)
Frame = +1
Query: 1 AVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGL 180
AVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGL
Sbjct: 619 AVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGL 678
Query: 181 SEAISLLEPLTSDVVDFVRQGALIAMSMVMVQISEASDSRVGAFRRQLEKIILDKHEDTM 360
SEAISLLEPLTSDVVDFVRQGALIAM+MVMVQISEASDSRVGAFRRQLEKIILDKHEDTM
Sbjct: 679 SEAISLLEPLTSDVVDFVRQGALIAMAMVMVQISEASDSRVGAFRRQLEKIILDKHEDTM 738
Query: 361 SKMGAILASGILDAGGRNVTIKLLSKTKHDKITAV 465
SKMGAILASGILDAGGRNVTI+LLSKTKHDKITAV
Sbjct: 739 SKMGAILASGILDAGGRNVTIRLLSKTKHDKITAV 773
Score = 125 bits (313), Expect = 2e-26
Identities = 75/128 (58%), Positives = 79/128 (61%), Gaps = 4/128 (3%)
Frame = +1
Query: 595 VKLPTAVLXXXXXXXXXXXXXEADQKAITEXXXXXXXXXXXXXXXXXXXXXX----MQVD 762
VKLPTAVL EA+QK I E MQVD
Sbjct: 839 VKLPTAVLSTSAKAKARAKK-EAEQKNIAEKSAAESSSAGSNSAKGKATAEKDSDSMQVD 897
Query: 763 TPVEKKAEPEPSFEILTNPARVVPAQEKFIKFLEESRYTPVKSAASGFVLLKDLRPTEPE 942
P EKKAEPEPSFEILTNPARVVPAQEK IKFLE+SRY PVK A SGFVLL+DL P+EPE
Sbjct: 898 NPPEKKAEPEPSFEILTNPARVVPAQEKVIKFLEDSRYVPVKLAPSGFVLLRDLHPSEPE 957
Query: 943 VLSLTDAP 966
VLSLTD P
Sbjct: 958 VLSLTDTP 965
>ref|NP_171973.1| 26S proteasome regulatory subunit N2 [Arabidopsis thaliana]
gi|7211984|gb|AAF40455.1|AC004809_13 Strong similarity to
the SEN3-like tRNA-processing protein F24L7.13 from A.
thaliana gi|2914700 on BAC gb|AC003974. EST gb|AA712969
comes from this gene [Arabidopsis thaliana]
gi|28393231|gb|AAO42045.1| putative 26S proteasome
regulatory subunit (RPN2) [Arabidopsis thaliana]
gi|332189625|gb|AEE27746.1| 26S proteasome regulatory
subunit N2 [Arabidopsis thaliana]
Length = 1001
Score = 290 bits (741), Expect = 5e-76
Identities = 151/155 (97%), Positives = 155/155 (100%)
Frame = +1
Query: 1 AVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGL 180
AVSDVSDDVRRTAVLALGFVLYS+PEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGL
Sbjct: 616 AVSDVSDDVRRTAVLALGFVLYSDPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGL 675
Query: 181 SEAISLLEPLTSDVVDFVRQGALIAMSMVMVQISEASDSRVGAFRRQLEKIILDKHEDTM 360
SEAISLLEPLTSDVVDFVRQGALIAM+MVMVQISEASDSRVGAFRRQLEKIILDKHEDTM
Sbjct: 676 SEAISLLEPLTSDVVDFVRQGALIAMAMVMVQISEASDSRVGAFRRQLEKIILDKHEDTM 735
Query: 361 SKMGAILASGILDAGGRNVTIKLLSKTKHDKITAV 465
SKMGAILASGILDAGGRNVTI+LLSKTKHDK+TAV
Sbjct: 736 SKMGAILASGILDAGGRNVTIRLLSKTKHDKVTAV 770
Score = 111 bits (277), Expect = 3e-22
Identities = 69/126 (54%), Positives = 77/126 (61%), Gaps = 3/126 (2%)
Frame = +1
Query: 598 KLPTAVLXXXXXXXXXXXXXEADQKAITEXXXXXXXXXXXXXXXXXXXXXXMQVD---TP 768
KLPTAVL EA+QKA E MQVD T
Sbjct: 837 KLPTAVLSTSAKAKAKAKK-EAEQKAKAENSGNEAGKANAASDEKEAES--MQVDSTATT 893
Query: 769 VEKKAEPEPSFEILTNPARVVPAQEKFIKFLEESRYTPVKSAASGFVLLKDLRPTEPEVL 948
VEKK EPE +FEIL NPARVVP+QEK+IK +E+SRY P+K A SGFVLL+DLRP EPEVL
Sbjct: 894 VEKKVEPEATFEILVNPARVVPSQEKYIKLMEDSRYVPMKLAPSGFVLLRDLRPHEPEVL 953
Query: 949 SLTDAP 966
SLTDAP
Sbjct: 954 SLTDAP 959
>ref|XP_002889525.1| hypothetical protein ARALYDRAFT_470466 [Arabidopsis lyrata subsp.
lyrata] gi|297335367|gb|EFH65784.1| hypothetical protein
ARALYDRAFT_470466 [Arabidopsis lyrata subsp. lyrata]
Length = 1001
Score = 290 bits (741), Expect = 5e-76
Identities = 151/155 (97%), Positives = 155/155 (100%)
Frame = +1
Query: 1 AVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGL 180
AVSDVSDDVRRTAVLALGFVLYS+PEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGL
Sbjct: 616 AVSDVSDDVRRTAVLALGFVLYSDPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGL 675
Query: 181 SEAISLLEPLTSDVVDFVRQGALIAMSMVMVQISEASDSRVGAFRRQLEKIILDKHEDTM 360
SEAISLLEPLTSDVVDFVRQGALIAM+MVMVQISEASDSRVGAFRRQLEKIILDKHEDTM
Sbjct: 676 SEAISLLEPLTSDVVDFVRQGALIAMAMVMVQISEASDSRVGAFRRQLEKIILDKHEDTM 735
Query: 361 SKMGAILASGILDAGGRNVTIKLLSKTKHDKITAV 465
SKMGAILASGILDAGGRNVTI+LLSKTKHDK+TAV
Sbjct: 736 SKMGAILASGILDAGGRNVTIRLLSKTKHDKVTAV 770
Score = 113 bits (283), Expect = 6e-23
Identities = 71/126 (56%), Positives = 77/126 (61%), Gaps = 3/126 (2%)
Frame = +1
Query: 598 KLPTAVLXXXXXXXXXXXXXEADQKAITEXXXXXXXXXXXXXXXXXXXXXXMQVD---TP 768
KLPTAVL EA+QKA E MQVD T
Sbjct: 837 KLPTAVLSTSAKAKARAKK-EAEQKANAEKSGNEAGKAKAASDEKEAES--MQVDSTATT 893
Query: 769 VEKKAEPEPSFEILTNPARVVPAQEKFIKFLEESRYTPVKSAASGFVLLKDLRPTEPEVL 948
VEKK EPE +FEIL NPARVVP+QEK+IK +EESRY PVK A SGFVLL+DLRP EPEVL
Sbjct: 894 VEKKVEPEATFEILVNPARVVPSQEKYIKLMEESRYVPVKLAPSGFVLLRDLRPHEPEVL 953
Query: 949 SLTDAP 966
SLTDAP
Sbjct: 954 SLTDAP 959
>ref|XP_002879409.1| hypothetical protein ARALYDRAFT_482209 [Arabidopsis lyrata subsp.
lyrata] gi|297325248|gb|EFH55668.1| hypothetical protein
ARALYDRAFT_482209 [Arabidopsis lyrata subsp. lyrata]
Length = 1002
Score = 290 bits (741), Expect = 5e-76
Identities = 151/155 (97%), Positives = 155/155 (100%)
Frame = +1
Query: 1 AVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGL 180
AVSDVSDDVRRTAVLALGFVLYS+PEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGL
Sbjct: 616 AVSDVSDDVRRTAVLALGFVLYSDPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGL 675
Query: 181 SEAISLLEPLTSDVVDFVRQGALIAMSMVMVQISEASDSRVGAFRRQLEKIILDKHEDTM 360
SEAISLLEPLTSDVVDFVRQGALIAM+MVMVQISEASDSRVGAFRRQLEKIILDKHEDTM
Sbjct: 676 SEAISLLEPLTSDVVDFVRQGALIAMAMVMVQISEASDSRVGAFRRQLEKIILDKHEDTM 735
Query: 361 SKMGAILASGILDAGGRNVTIKLLSKTKHDKITAV 465
SKMGAILASGILDAGGRNVTI+LLSKTKHDK+TAV
Sbjct: 736 SKMGAILASGILDAGGRNVTIRLLSKTKHDKVTAV 770
Score = 116 bits (291), Expect = 7e-24
Identities = 76/132 (57%), Positives = 81/132 (61%), Gaps = 8/132 (6%)
Frame = +1
Query: 595 VKLPTAVLXXXXXXXXXXXXXEADQKAITEXXXXXXXXXXXXXXXXXXXXXX-----MQV 759
VKLPTAVL EA+QKAI E MQV
Sbjct: 836 VKLPTAVLSTSVKAKARAKK-EAEQKAIAEKTSGPEKPVNESGSGKGKASTEKEGDSMQV 894
Query: 760 DTP--VEKKA-EPEPSFEILTNPARVVPAQEKFIKFLEESRYTPVKSAASGFVLLKDLRP 930
D+P VEKKA EPEP+FEIL NPARVVPAQEK+IK LE+SRY PVK A SGFVLLKDLR
Sbjct: 895 DSPAAVEKKAAEPEPAFEILVNPARVVPAQEKYIKLLEDSRYVPVKLAPSGFVLLKDLRQ 954
Query: 931 TEPEVLSLTDAP 966
EPEVLSLTDAP
Sbjct: 955 HEPEVLSLTDAP 966
>gb|AAP73043.1| 26S proteasome subunit RPN2b [Arabidopsis thaliana]
Length = 995
Score = 290 bits (741), Expect = 5e-76
Identities = 151/155 (97%), Positives = 155/155 (100%)
Frame = +1
Query: 1 AVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGL 180
AVSDVSDDVRRTAVLALGFVLYS+PEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGL
Sbjct: 615 AVSDVSDDVRRTAVLALGFVLYSDPEQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGL 674
Query: 181 SEAISLLEPLTSDVVDFVRQGALIAMSMVMVQISEASDSRVGAFRRQLEKIILDKHEDTM 360
SEAISLLEPLTSDVVDFVRQGALIAM+MVMVQISEASDSRVGAFRRQLEKIILDKHEDTM
Sbjct: 675 SEAISLLEPLTSDVVDFVRQGALIAMAMVMVQISEASDSRVGAFRRQLEKIILDKHEDTM 734
Query: 361 SKMGAILASGILDAGGRNVTIKLLSKTKHDKITAV 465
SKMGAILASGILDAGGRNVTI+LLSKTKHDK+TAV
Sbjct: 735 SKMGAILASGILDAGGRNVTIRLLSKTKHDKVTAV 769
Score = 111 bits (277), Expect = 3e-22
Identities = 69/126 (54%), Positives = 77/126 (61%), Gaps = 3/126 (2%)
Frame = +1
Query: 598 KLPTAVLXXXXXXXXXXXXXEADQKAITEXXXXXXXXXXXXXXXXXXXXXXMQVD---TP 768
KLPTAVL EA+QKA E MQVD T
Sbjct: 836 KLPTAVLSTSAKAKAKAKK-EAEQKAKAENSGNEAGKANAASDEKEAES--MQVDSTATT 892
Query: 769 VEKKAEPEPSFEILTNPARVVPAQEKFIKFLEESRYTPVKSAASGFVLLKDLRPTEPEVL 948
VEKK EPE +FEIL NPARVVP+QEK+IK +E+SRY P+K A SGFVLL+DLRP EPEVL
Sbjct: 893 VEKKVEPEATFEILVNPARVVPSQEKYIKLMEDSRYVPMKLAPSGFVLLRDLRPHEPEVL 952
Query: 949 SLTDAP 966
SLTDAP
Sbjct: 953 SLTDAP 958