BLASTX nr result

ID: Panax21_contig00001888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001888
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001239802.1| uncharacterized protein LOC100793888 [Glycin...   134   3e-44
ref|XP_003534502.1| PREDICTED: putative RNA-binding protein Luc7...   132   1e-43
ref|XP_004138908.1| PREDICTED: putative RNA-binding protein Luc7...   132   6e-43
ref|XP_003624200.1| Luc7-like protein [Medicago truncatula] gi|3...   129   7e-42
ref|XP_002276691.1| PREDICTED: putative RNA-binding protein Luc7...   122   2e-39

>ref|NP_001239802.1| uncharacterized protein LOC100793888 [Glycine max]
           gi|255636477|gb|ACU18577.1| unknown [Glycine max]
          Length = 414

 Score =  134 bits (337), Expect(2) = 3e-44
 Identities = 82/140 (58%), Positives = 84/140 (60%)
 Frame = -2

Query: 712 DMKIRALEVLEELRTKRADKQSMLLLDAFNKDRASLPQPLPNPXXXXXXXXXXXXXXXXX 533
           D+KIRALEV+EELRTKRADKQSMLLLDAFNKDRASLP PLPNP                 
Sbjct: 151 DLKIRALEVVEELRTKRADKQSMLLLDAFNKDRASLPTPLPNP------PPLAPLPVVAP 204

Query: 532 XXXXXXXXXXXXXXXXXXXXXXXXXEAQXXXXXXXXXXXLPVLRQEPVLDSSKYTAADVR 353
                                    EAQ           LP  RQEPVLDSSKYTAADVR
Sbjct: 205 DARTQEMINEKLKKAEDLGEQGMVDEAQKALEEAEALKKLPA-RQEPVLDSSKYTAADVR 263

Query: 352 ITDQKLRVCDICGAFLSVYD 293
           ITDQKLRVCDICGAFLSVYD
Sbjct: 264 ITDQKLRVCDICGAFLSVYD 283



 Score = 70.5 bits (171), Expect(2) = 3e-44
 Identities = 40/77 (51%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
 Frame = -1

Query: 230 DRRLADHFGGKLHLGYMQIREKLADLKDERDNKRKASE-ELIRSKEXXXXXXXXXXXXXX 54
           DRRLADHFGGKLHLGYMQIREKLA+L++ER+  RK    +  RSKE              
Sbjct: 285 DRRLADHFGGKLHLGYMQIREKLAELQEERNKSRKTDRLDDRRSKERSRDRDRESSRDHE 344

Query: 53  XXXXXXXXXDHDRRSKD 3
                    DHDRRS+D
Sbjct: 345 RGDSRERGRDHDRRSRD 361


>ref|XP_003534502.1| PREDICTED: putative RNA-binding protein Luc7-like 2-like [Glycine
           max]
          Length = 414

 Score =  132 bits (333), Expect(2) = 1e-43
 Identities = 81/140 (57%), Positives = 83/140 (59%)
 Frame = -2

Query: 712 DMKIRALEVLEELRTKRADKQSMLLLDAFNKDRASLPQPLPNPXXXXXXXXXXXXXXXXX 533
           D+KIRALEV+EELRTKRADKQSMLLLDAFNKDRASLP PLPNP                 
Sbjct: 151 DLKIRALEVVEELRTKRADKQSMLLLDAFNKDRASLPTPLPNP------PPLAPLPVVAP 204

Query: 532 XXXXXXXXXXXXXXXXXXXXXXXXXEAQXXXXXXXXXXXLPVLRQEPVLDSSKYTAADVR 353
                                    EAQ           LP  RQEPVLDSSKYTA DVR
Sbjct: 205 DARTQEMINEKLKKAEDLGEQGMVDEAQKALEEAEALKKLPA-RQEPVLDSSKYTAVDVR 263

Query: 352 ITDQKLRVCDICGAFLSVYD 293
           ITDQKLRVCDICGAFLSVYD
Sbjct: 264 ITDQKLRVCDICGAFLSVYD 283



 Score = 70.5 bits (171), Expect(2) = 1e-43
 Identities = 40/77 (51%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
 Frame = -1

Query: 230 DRRLADHFGGKLHLGYMQIREKLADLKDERDNKRKASE-ELIRSKEXXXXXXXXXXXXXX 54
           DRRLADHFGGKLHLGYMQIREKLA+L++ER+  RK    +  RSKE              
Sbjct: 285 DRRLADHFGGKLHLGYMQIREKLAELQEERNKSRKTDRLDDRRSKERSRDRDRESSRDRE 344

Query: 53  XXXXXXXXXDHDRRSKD 3
                    DHDRRS+D
Sbjct: 345 LGDSRERGRDHDRRSRD 361


>ref|XP_004138908.1| PREDICTED: putative RNA-binding protein Luc7-like 2-like [Cucumis
           sativus] gi|449506274|ref|XP_004162701.1| PREDICTED:
           putative RNA-binding protein Luc7-like 2-like [Cucumis
           sativus]
          Length = 413

 Score =  132 bits (333), Expect(2) = 6e-43
 Identities = 80/140 (57%), Positives = 84/140 (60%)
 Frame = -2

Query: 712 DMKIRALEVLEELRTKRADKQSMLLLDAFNKDRASLPQPLPNPXXXXXXXXXXXXXXXXX 533
           D+KIR LEV+EELRT+RADKQSMLLLDAFNKDRASLPQPLPNP                 
Sbjct: 151 DLKIRVLEVVEELRTRRADKQSMLLLDAFNKDRASLPQPLPNP------PPLAPLPVVAP 204

Query: 532 XXXXXXXXXXXXXXXXXXXXXXXXXEAQXXXXXXXXXXXLPVLRQEPVLDSSKYTAADVR 353
                                    EAQ           LP  RQEPV+DSSKYTAADVR
Sbjct: 205 DPRTQEMINEKLKKAEELGEQGMIDEAQKALEEAEALKKLPA-RQEPVVDSSKYTAADVR 263

Query: 352 ITDQKLRVCDICGAFLSVYD 293
           ITDQKLRVCDICGAFLSVYD
Sbjct: 264 ITDQKLRVCDICGAFLSVYD 283



 Score = 67.8 bits (164), Expect(2) = 6e-43
 Identities = 39/77 (50%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
 Frame = -1

Query: 230 DRRLADHFGGKLHLGYMQIREKLADLKDERDNKRKAS-EELIRSKEXXXXXXXXXXXXXX 54
           DRRLADHFGGKLHLGYMQIREKLA+L++ER+  RK    +  RSKE              
Sbjct: 285 DRRLADHFGGKLHLGYMQIREKLAELQEERNKSRKVDRHDDRRSKERSREPDREPSRDRD 344

Query: 53  XXXXXXXXXDHDRRSKD 3
                    D+DRRS+D
Sbjct: 345 RGDSRDRGRDNDRRSRD 361


>ref|XP_003624200.1| Luc7-like protein [Medicago truncatula] gi|355499215|gb|AES80418.1|
           Luc7-like protein [Medicago truncatula]
          Length = 410

 Score =  129 bits (325), Expect(2) = 7e-42
 Identities = 80/140 (57%), Positives = 82/140 (58%)
 Frame = -2

Query: 712 DMKIRALEVLEELRTKRADKQSMLLLDAFNKDRASLPQPLPNPXXXXXXXXXXXXXXXXX 533
           DMKIRALE++EELR KRADKQS LLLDAFNKDRASLPQPLPNP                 
Sbjct: 151 DMKIRALEIVEELRIKRADKQSTLLLDAFNKDRASLPQPLPNP------PPLAPLPVVTP 204

Query: 532 XXXXXXXXXXXXXXXXXXXXXXXXXEAQXXXXXXXXXXXLPVLRQEPVLDSSKYTAADVR 353
                                    EAQ           LP  RQEP LDSSKYTAADVR
Sbjct: 205 DARTQEMINEKLKKAEDLGEQGLIDEAQKALEEAEALKKLP-SRQEPPLDSSKYTAADVR 263

Query: 352 ITDQKLRVCDICGAFLSVYD 293
           ITDQKLRVCDICGAFLSVYD
Sbjct: 264 ITDQKLRVCDICGAFLSVYD 283



 Score = 67.4 bits (163), Expect(2) = 7e-42
 Identities = 39/77 (50%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
 Frame = -1

Query: 230 DRRLADHFGGKLHLGYMQIREKLADLKDERDNKRKASE-ELIRSKEXXXXXXXXXXXXXX 54
           DRRLADHFGGKLHLGYMQIREKLA+L++ER+  RK    +  RSKE              
Sbjct: 285 DRRLADHFGGKLHLGYMQIREKLAELQEERNKSRKIDRLDDRRSKERSRDRDREPSRDRE 344

Query: 53  XXXXXXXXXDHDRRSKD 3
                    D+DRRS+D
Sbjct: 345 RGESHERGRDNDRRSRD 361


>ref|XP_002276691.1| PREDICTED: putative RNA-binding protein Luc7-like 2 [Vitis
           vinifera] gi|297735244|emb|CBI17606.3| unnamed protein
           product [Vitis vinifera]
          Length = 419

 Score =  122 bits (305), Expect(2) = 2e-39
 Identities = 76/140 (54%), Positives = 78/140 (55%)
 Frame = -2

Query: 712 DMKIRALEVLEELRTKRADKQSMLLLDAFNKDRASLPQPLPNPXXXXXXXXXXXXXXXXX 533
           D KIRALEV+EELRTKRADKQSMLLLDAFNKDRASLPQPLPNP                 
Sbjct: 151 DSKIRALEVVEELRTKRADKQSMLLLDAFNKDRASLPQPLPNPPPLAPLPVLAPDPRTQE 210

Query: 532 XXXXXXXXXXXXXXXXXXXXXXXXXEAQXXXXXXXXXXXLPVLRQEPVLDSSKYTAADVR 353
                                    E +            PVL      DSSKYTAADVR
Sbjct: 211 MINEKLKKAEDLGEQGMIDEAQKALE-EAEALKKLAPRQEPVL------DSSKYTAADVR 263

Query: 352 ITDQKLRVCDICGAFLSVYD 293
           ITDQKLRVCDICGAFLSVYD
Sbjct: 264 ITDQKLRVCDICGAFLSVYD 283



 Score = 67.0 bits (162), Expect(2) = 2e-39
 Identities = 36/76 (47%), Positives = 42/76 (55%)
 Frame = -1

Query: 230 DRRLADHFGGKLHLGYMQIREKLADLKDERDNKRKASEELIRSKEXXXXXXXXXXXXXXX 51
           DRRLADHFGGKLHLGYMQIREKLA+L++ER+  RK        +                
Sbjct: 285 DRRLADHFGGKLHLGYMQIREKLAELQEERNKSRKVDRHENDRRSKERSRDHDREASKDR 344

Query: 50  XXXXXXXXDHDRRSKD 3
                   DHDRRS+D
Sbjct: 345 ADSRERGRDHDRRSRD 360


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