BLASTX nr result

ID: Panax21_contig00001879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001879
         (840 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275532.2| PREDICTED: uncharacterized protein LOC100254...   391   e-107
emb|CBI34780.3| unnamed protein product [Vitis vinifera]              387   e-105
ref|XP_002298082.1| predicted protein [Populus trichocarpa] gi|2...   356   3e-96
ref|XP_002509671.1| splicing factor yt521-B, putative [Ricinus c...   343   2e-92
ref|NP_192934.2| YT521-B-like protein [Arabidopsis thaliana] gi|...   286   3e-75

>ref|XP_002275532.2| PREDICTED: uncharacterized protein LOC100254803 [Vitis vinifera]
          Length = 404

 Score =  391 bits (1005), Expect = e-107
 Identities = 197/281 (70%), Positives = 224/281 (79%), Gaps = 1/281 (0%)
 Frame = +1

Query: 1   ESPSYKVDGDAYHSGAEEQGHSCEQVGNLSA-KKDKFNGTRYFIIKSLNHENIQLSIAKG 177
           ES SYK + D Y SG EEQ HS   + N SA KK K   TRYFIIKSLNH NIQLS+ KG
Sbjct: 31  ESSSYKANEDGYPSGPEEQRHSHTGMLNSSANKKGKLYSTRYFIIKSLNHHNIQLSMEKG 90

Query: 178 IWATQFMNEPILEEAFHNSSKVILVFSVNMSGFFQGYAQMMSSVGWRRDNVWSQGTGGSN 357
           IWATQ MNEPILEEAFHNS KVIL+FSVNMSGFFQGYAQMMSSVGWRRDNVWSQG+GG+N
Sbjct: 91  IWATQVMNEPILEEAFHNSGKVILIFSVNMSGFFQGYAQMMSSVGWRRDNVWSQGSGGNN 150

Query: 358 PWGRSFKVKWLQLHDLPFQKTLHLKNPLNNYKPVKISRDCQELPQDIGEALCELLDGKVD 537
           PWGRSFKVKWL+LHDLPFQKTLHLKNPLN+YKPVKISRDCQEL Q+IGEALCELLDGK D
Sbjct: 151 PWGRSFKVKWLRLHDLPFQKTLHLKNPLNDYKPVKISRDCQELSQEIGEALCELLDGKTD 210

Query: 538 VDGKQRRDEYERDNLPFKRPCIEPSFFACDEEYNLPTVQRSLGGAPMLYPSLLYQHQTEA 717
           V    R++++  D+LP +RP +EPS     EEYNL ++   +    MLYPSLLYQH+ EA
Sbjct: 211 VGDNLRKNDFSGDDLPPRRPFMEPSCSLPGEEYNLSSMH--MTWTSMLYPSLLYQHKAEA 268

Query: 718 SKFHLAYQGSAGIFLPENSPATSGASKLTRSERSCIKGSLT 840
           ++FHLA+Q S G FLPEN P +SG SK+TR +   I G+ T
Sbjct: 269 NRFHLAHQRSTGPFLPENLPISSGPSKVTRVKHPRISGNFT 309


>emb|CBI34780.3| unnamed protein product [Vitis vinifera]
          Length = 306

 Score =  387 bits (994), Expect = e-105
 Identities = 194/270 (71%), Positives = 219/270 (81%), Gaps = 1/270 (0%)
 Frame = +1

Query: 1   ESPSYKVDGDAYHSGAEEQGHSCEQVGNLSA-KKDKFNGTRYFIIKSLNHENIQLSIAKG 177
           ES SYK + D Y SG EEQ HS   + N SA KK K   TRYFIIKSLNH NIQLS+ KG
Sbjct: 31  ESSSYKANEDGYPSGPEEQRHSHTGMLNSSANKKGKLYSTRYFIIKSLNHHNIQLSMEKG 90

Query: 178 IWATQFMNEPILEEAFHNSSKVILVFSVNMSGFFQGYAQMMSSVGWRRDNVWSQGTGGSN 357
           IWATQ MNEPILEEAFHNS KVIL+FSVNMSGFFQGYAQMMSSVGWRRDNVWSQG+GG+N
Sbjct: 91  IWATQVMNEPILEEAFHNSGKVILIFSVNMSGFFQGYAQMMSSVGWRRDNVWSQGSGGNN 150

Query: 358 PWGRSFKVKWLQLHDLPFQKTLHLKNPLNNYKPVKISRDCQELPQDIGEALCELLDGKVD 537
           PWGRSFKVKWL+LHDLPFQKTLHLKNPLN+YKPVKISRDCQEL Q+IGEALCELLDGK D
Sbjct: 151 PWGRSFKVKWLRLHDLPFQKTLHLKNPLNDYKPVKISRDCQELSQEIGEALCELLDGKTD 210

Query: 538 VDGKQRRDEYERDNLPFKRPCIEPSFFACDEEYNLPTVQRSLGGAPMLYPSLLYQHQTEA 717
           V    R++++  D+LP +RP +EPS     EEYNL ++   +    MLYPSLLYQH+ EA
Sbjct: 211 VGDNLRKNDFSGDDLPPRRPFMEPSCSLPGEEYNLSSMH--MTWTSMLYPSLLYQHKAEA 268

Query: 718 SKFHLAYQGSAGIFLPENSPATSGASKLTR 807
           ++FHLA+Q S G FLPEN P +SG SK+TR
Sbjct: 269 NRFHLAHQRSTGPFLPENLPISSGPSKVTR 298


>ref|XP_002298082.1| predicted protein [Populus trichocarpa] gi|222845340|gb|EEE82887.1|
           predicted protein [Populus trichocarpa]
          Length = 398

 Score =  356 bits (914), Expect = 3e-96
 Identities = 180/274 (65%), Positives = 211/274 (77%), Gaps = 1/274 (0%)
 Frame = +1

Query: 1   ESPSYKVDGDAYHSGAEEQGHSCEQVGNLSA-KKDKFNGTRYFIIKSLNHENIQLSIAKG 177
           ESPSYK + D Y   AE+ GH  ++VGN S  KK K   TRYFIIKSLN  NIQLSI  G
Sbjct: 31  ESPSYKGNEDGYPIMAEKAGH--DRVGNSSINKKRKLCNTRYFIIKSLNQHNIQLSIENG 88

Query: 178 IWATQFMNEPILEEAFHNSSKVILVFSVNMSGFFQGYAQMMSSVGWRRDNVWSQGTGGSN 357
           IWATQ  NEPILEEAFHNS +VIL++SVNMSGFFQGYAQM+SSVGWR DN+WS+G+G SN
Sbjct: 89  IWATQVRNEPILEEAFHNSGRVILIYSVNMSGFFQGYAQMISSVGWRHDNLWSEGSGKSN 148

Query: 358 PWGRSFKVKWLQLHDLPFQKTLHLKNPLNNYKPVKISRDCQELPQDIGEALCELLDGKVD 537
           PWGRSFKVKWL+L+DLPFQKTLHLKNPLN+YKPVKISRDCQELP+DIGEALCEL+DG+ D
Sbjct: 149 PWGRSFKVKWLRLNDLPFQKTLHLKNPLNDYKPVKISRDCQELPEDIGEALCELIDGERD 208

Query: 538 VDGKQRRDEYERDNLPFKRPCIEPSFFACDEEYNLPTVQRSLGGAPMLYPSLLYQHQTEA 717
            DG  +RD+     LP KRPCI+PS +  D  Y +P +Q   G  P  YPS LYQ   EA
Sbjct: 209 TDGMVKRDD-----LPMKRPCIDPSSYTGDGVYTVPPLQMPWGRTPTPYPSFLYQQHDEA 263

Query: 718 SKFHLAYQGSAGIFLPENSPATSGASKLTRSERS 819
           S+FHLA+QG  G    +N+  +SGASK+ R ++S
Sbjct: 264 SRFHLAHQGPTGAGFTDNA-LSSGASKVARMKQS 296


>ref|XP_002509671.1| splicing factor yt521-B, putative [Ricinus communis]
           gi|223549570|gb|EEF51058.1| splicing factor yt521-B,
           putative [Ricinus communis]
          Length = 358

 Score =  343 bits (881), Expect = 2e-92
 Identities = 176/280 (62%), Positives = 204/280 (72%), Gaps = 1/280 (0%)
 Frame = +1

Query: 1   ESPSYKVDGDAYHSGAEEQGHSCEQVGNLSAKKD-KFNGTRYFIIKSLNHENIQLSIAKG 177
           ESP+YK D D Y    +  GH  EQV N S KK  K   TRYFIIKSLNH NIQLS+ KG
Sbjct: 31  ESPTYKGDEDCYPFMVKRTGH--EQVENSSLKKKGKLYNTRYFIIKSLNHHNIQLSVEKG 88

Query: 178 IWATQFMNEPILEEAFHNSSKVILVFSVNMSGFFQGYAQMMSSVGWRRDNVWSQGTGGSN 357
           IWATQ MNEPILEEAFHNS KVIL+FS+NMSGFFQGYAQMMS+VGWRRDN+WSQG   +N
Sbjct: 89  IWATQVMNEPILEEAFHNSGKVILIFSINMSGFFQGYAQMMSTVGWRRDNIWSQGCSKNN 148

Query: 358 PWGRSFKVKWLQLHDLPFQKTLHLKNPLNNYKPVKISRDCQELPQDIGEALCELLDGKVD 537
           PWGRSF+VKWLQL+DLPFQKTLHLKNPLN+YKPVKISRDCQELP+DIGEALCEL+DG  D
Sbjct: 149 PWGRSFRVKWLQLNDLPFQKTLHLKNPLNDYKPVKISRDCQELPEDIGEALCELIDGDND 208

Query: 538 VDGKQRRDEYERDNLPFKRPCIEPSFFACDEEYNLPTVQRSLGGAPMLYPSLLYQHQTEA 717
           +DG  +RD+     +P KRP +EP     DEEYN+P +       P+ Y S LYQH   A
Sbjct: 209 IDGMLKRDD-----IPLKRPRMEPPCSLGDEEYNVPPMHIPWVRTPIPYSSFLYQHHAGA 263

Query: 718 SKFHLAYQGSAGIFLPENSPATSGASKLTRSERSCIKGSL 837
           S+F              N P ++GASK++R + S + GSL
Sbjct: 264 SRFRAV-----------NLPLSAGASKVSRMKHSQVNGSL 292


>ref|NP_192934.2| YT521-B-like protein [Arabidopsis thaliana]
           gi|332657676|gb|AEE83076.1| YT521-B-like protein
           [Arabidopsis thaliana]
          Length = 444

 Score =  286 bits (733), Expect = 3e-75
 Identities = 156/275 (56%), Positives = 192/275 (69%), Gaps = 3/275 (1%)
 Frame = +1

Query: 1   ESPSYKVDGDAYHSGAE-EQGHSCEQVGNLSAKKDKFNG--TRYFIIKSLNHENIQLSIA 171
           ES SY+   D   S  + ++ +  +Q+ +  A K+   G  TRYFIIKSLN++NIQ+S+ 
Sbjct: 31  ESTSYRSKEDHKLSKVDVDRRNFPDQLESAKANKNSKPGYRTRYFIIKSLNYDNIQVSVE 90

Query: 172 KGIWATQFMNEPILEEAFHNSSKVILVFSVNMSGFFQGYAQMMSSVGWRRDNVWSQGTGG 351
           KGIWATQ MNEPILE AFH S +VIL+FSVNMSGFFQGYA+M+S VGWRRD +WSQG G 
Sbjct: 91  KGIWATQVMNEPILEGAFHKSGRVILIFSVNMSGFFQGYAEMLSPVGWRRDQIWSQGGGK 150

Query: 352 SNPWGRSFKVKWLQLHDLPFQKTLHLKNPLNNYKPVKISRDCQELPQDIGEALCELLDGK 531
           +NPWGRSFKVKWL+L +LPFQKTLHLKNPLN+YKPVKISRDCQELP+DIGEALCELLD  
Sbjct: 151 NNPWGRSFKVKWLRLSELPFQKTLHLKNPLNDYKPVKISRDCQELPEDIGEALCELLDAN 210

Query: 532 VDVDGKQRRDEYERDNLPFKRPCIEPSFFACDEEYNLPTVQRSLGGAPMLYPSLLYQHQT 711
              DG    +   RD+   KR   EP   + D+EYN        G  PM YP  +Y +Q 
Sbjct: 211 SCDDG--LLNSSSRDDYSTKRSRAEPPSSSGDDEYN----NNLWGHTPMSYPPTVYPNQD 264

Query: 712 EASKFHLAYQGSAGIFLPENSPATSGASKLTRSER 816
           + S+FHLA Q   G+  PE    + GAS  +R+E+
Sbjct: 265 DLSRFHLAQQRGYGV-SPEYLHTSPGASN-SRTEQ 297


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