BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001840
         (1041 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vit...   270   3e-70
emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]   266   5e-69
ref|XP_002533989.1| ring finger protein, putative [Ricinus commu...   235   1e-59
ref|XP_002324500.1| predicted protein [Populus trichocarpa] gi|2...   220   5e-55
ref|XP_003542294.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 fing...   214   3e-53

>ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vitis vinifera]
          Length = 543

 Score =  270 bits (691), Expect = 3e-70
 Identities = 153/266 (57%), Positives = 179/266 (67%), Gaps = 6/266 (2%)
 Frame = +3

Query: 210  LGTASNSVARANSHLGVHCHEEFGSSRIEILPKSCXXXXXXXXXXXXXXXXXXXXXXXX- 386
            LGT +NSV R NSHLG +   EFGS RI+   KSC                         
Sbjct: 254  LGT-NNSVLRTNSHLGCN-DNEFGSIRIDPSYKSCEIVAKEEAPAAALLLDSGEKVVPVK 311

Query: 387  LGKFKNVDXXXXXXXXXXXXVDARRCFSMGSFEYVMDENTSLQVPIRTPMKKQSSKKPCL 566
            LGKFKNVD            VD RRCFSMGSFEYVMDEN+SLQVPIRTP+KK S+K+  L
Sbjct: 312  LGKFKNVDGGGEGSSTSN--VDERRCFSMGSFEYVMDENSSLQVPIRTPVKKTSTKRRSL 369

Query: 567  PLIPGHKPAMSECDCDSRRDFNGLEAFNSVDIHGGTNTSISIGY--GDNKIGRSKRESFS 740
            PL PG + AMSECDC+SRR+F+G +A    D H G+++SI  G     N IGRSKRESFS
Sbjct: 370  PLTPGGRMAMSECDCESRREFSGFDAVKGGDTHMGSSSSIITGNNGNGNAIGRSKRESFS 429

Query: 741  VSKIWLRGKKEKPNSTTGES---AFSFRFPLHRNVVAADEMKPKNEGSDTRRSTSEIDTG 911
            +SKIWLRGKKE P+S T +S   AFS+RFP+H +  AAD++K KN  S T R+ SE++ G
Sbjct: 430  ISKIWLRGKKENPSSRTVDSSRRAFSYRFPVHSSSAAADDLKLKNVSSSTGRTVSELEIG 489

Query: 912  RWENGGSELGCDEENQSCNSLDSQAN 989
            RWENGGSELGCDEE QSCNSLDSQAN
Sbjct: 490  RWENGGSELGCDEEMQSCNSLDSQAN 515



 Score = 77.0 bits (188), Expect = 7e-12
 Identities = 37/67 (55%), Positives = 41/67 (61%)
 Frame = +3

Query: 3   FILRPPNRXXXXXXXAIAXXXXXXXXXXXXDSGVDQSFIDTLPIFNYKAIIGVKTPFNCV 182
           F+LR PNR         A            D+GVDQSFIDTLP+F YKAIIG K PF+C 
Sbjct: 116 FLLRQPNREPEDLDNVTALQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGAKNPFDCA 175

Query: 183 VCLCEFE 203
           VCLCEFE
Sbjct: 176 VCLCEFE 182


>emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]
          Length = 543

 Score =  266 bits (681), Expect = 5e-69
 Identities = 152/266 (57%), Positives = 177/266 (66%), Gaps = 6/266 (2%)
 Frame = +3

Query: 210  LGTASNSVARANSHLGVHCHEEFGSSRIEILPKSCXXXXXXXXXXXXXXXXXXXXXXXX- 386
            LGT +NSV R NSHLG +   EFGS RI+   KSC                         
Sbjct: 254  LGT-NNSVLRTNSHLGCN-DNEFGSIRIDPSYKSCEIVAKEEAPAAALLLDSGEKVVPVK 311

Query: 387  LGKFKNVDXXXXXXXXXXXXVDARRCFSMGSFEYVMDENTSLQVPIRTPMKKQSSKKPCL 566
            LGKFKNVD            VD RRCFSMGSFEYVMDEN+SLQVPIRTP+KK S+K+  L
Sbjct: 312  LGKFKNVDGGGEGSSTSN--VDERRCFSMGSFEYVMDENSSLQVPIRTPVKKTSTKRRSL 369

Query: 567  PLIPGHKPAMSECDCDSRRDFNGLEAFNSVDIHGGTNTSISIGY--GDNKIGRSKRESFS 740
            PL PG + AMSECDC+SRR+F+G +A    D H G+++SI  G     N IGRSKRESFS
Sbjct: 370  PLTPGGRMAMSECDCESRREFSGFDAVKGGDTHMGSSSSIITGNNGNGNAIGRSKRESFS 429

Query: 741  VSKIWLRGKKEKPNSTTGES---AFSFRFPLHRNVVAADEMKPKNEGSDTRRSTSEIDTG 911
            +SKIWLRGKKE P+S T +S   AFS+RFP+H +  AA + K KN  S T R+ SE++ G
Sbjct: 430  ISKIWLRGKKENPSSRTVDSSRRAFSYRFPVHSSSAAAXDXKLKNVSSSTGRTVSELEIG 489

Query: 912  RWENGGSELGCDEENQSCNSLDSQAN 989
            RWENGGSELGCDEE QSCNSLDSQAN
Sbjct: 490  RWENGGSELGCDEEMQSCNSLDSQAN 515



 Score = 77.0 bits (188), Expect = 7e-12
 Identities = 37/67 (55%), Positives = 41/67 (61%)
 Frame = +3

Query: 3   FILRPPNRXXXXXXXAIAXXXXXXXXXXXXDSGVDQSFIDTLPIFNYKAIIGVKTPFNCV 182
           F+LR PNR         A            D+GVDQSFIDTLP+F YKAIIG K PF+C 
Sbjct: 116 FLLRQPNREPEDLDNVTALQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGAKNPFDCA 175

Query: 183 VCLCEFE 203
           VCLCEFE
Sbjct: 176 VCLCEFE 182


>ref|XP_002533989.1| ring finger protein, putative [Ricinus communis]
           gi|223526024|gb|EEF28396.1| ring finger protein,
           putative [Ricinus communis]
          Length = 495

 Score =  235 bits (600), Expect = 1e-59
 Identities = 139/258 (53%), Positives = 163/258 (63%), Gaps = 8/258 (3%)
 Frame = +3

Query: 222 SNSVARANSHLGVHCHEEFGSSRIEILPKSCXXXXXXXXXXXXXXXXXXXXXXXX-LGKF 398
           ++SV   NS+LG H   E GSSRIEI  KS                          LGKF
Sbjct: 216 TSSVLTTNSYLGFHGDNELGSSRIEISLKSGEILGKNESFSPRVAVDSGAKVVPVKLGKF 275

Query: 399 KNVDXXXXXXXXXXXXVDARRCFSMGSFEYVMDENTSLQVPIRTPMKKQSSKKPCLPLIP 578
           +NVD            VD RRCFSMGSFEYVMD+NTSLQV IRTPMKKQSSKKP +PL P
Sbjct: 276 RNVDIGEGSSNSN---VDERRCFSMGSFEYVMDDNTSLQVAIRTPMKKQSSKKPSIPLTP 332

Query: 579 GHKPAMSECDCDSRRDFNGL-EAFNSVDIHGGTNTSISIGYGDNKIGRSKRESFSVSKIW 755
           GH+PAMSECDC+SRR+FNGL E   S++ +G  +  ++   G N IGRSKRESFS+SKIW
Sbjct: 333 GHRPAMSECDCESRREFNGLFEGIRSMEANGNVSGVVTKSIG-NSIGRSKRESFSISKIW 391

Query: 756 LRGKKE--KPNSTTGESAFSFRFPLHRNVVAADE---MKPKN-EGSDTRRSTSEIDTGRW 917
           LRG+KE  KP   +   AFSFRFP+++NVV  DE   +K KN  GS  RR+ SEI  GRW
Sbjct: 392 LRGEKEKQKPPGDSSRRAFSFRFPVNKNVVPGDEDDNLKVKNGNGSGARRTNSEIGIGRW 451

Query: 918 ENGGSELGCDEENQSCNS 971
           EN       DEENQ CN+
Sbjct: 452 EN---RFSFDEENQICNA 466



 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 38/67 (56%), Positives = 44/67 (65%)
 Frame = +3

Query: 3   FILRPPNRXXXXXXXAIAXXXXXXXXXXXXDSGVDQSFIDTLPIFNYKAIIGVKTPFNCV 182
           F+LRPPNR         A            D+GVDQSFIDTLP+F+YKAIIG+K PF+C 
Sbjct: 76  FLLRPPNRDPDDLDNVTALQGQLQQLFHLHDAGVDQSFIDTLPVFHYKAIIGLKNPFDCA 135

Query: 183 VCLCEFE 203
           VCLCEFE
Sbjct: 136 VCLCEFE 142


>ref|XP_002324500.1| predicted protein [Populus trichocarpa] gi|222865934|gb|EEF03065.1|
           predicted protein [Populus trichocarpa]
          Length = 468

 Score =  220 bits (560), Expect = 5e-55
 Identities = 128/260 (49%), Positives = 154/260 (59%), Gaps = 6/260 (2%)
 Frame = +3

Query: 222 SNSVARANSHLGVHCHEEFGSSRIEILPKSCXXXXXXXXXXXXXXXXXXXXXXXX----L 389
           + SV   NSHL  H   E GSSR++I  KS                             L
Sbjct: 213 TTSVLTTNSHLSCHGDNELGSSRLDISHKSSEILTKDDSVPDSAPTIVVDSWDKVVPVKL 272

Query: 390 GKFKNVDXXXXXXXXXXXXVDARRCFSMGSFEYVMDENTSLQVPIRTPMKKQSSKKPCLP 569
           GKF+NVD            VD+RRC+SMGSFEYV+DEN+SLQVP+RTPMKKQSSKKP LP
Sbjct: 273 GKFRNVDNGEGSSTIN---VDSRRCYSMGSFEYVLDENSSLQVPVRTPMKKQSSKKPTLP 329

Query: 570 LIPGHKPAMSECDCDSRRDFNGLEAFNSVDIHGGTNTSISIGYGDNKIGRSKRESFSVSK 749
           L PGH+PAMSECDC+SRR+F+G E+  SV+++G   T+  +    N IGRSKRESFS+SK
Sbjct: 330 LTPGHRPAMSECDCESRREFDGFESLKSVEVNG---TASIVSSSGNGIGRSKRESFSISK 386

Query: 750 IWLRGKKEKPNSTTGES--AFSFRFPLHRNVVAADEMKPKNEGSDTRRSTSEIDTGRWEN 923
           IWLRGKK K NS    S  AFSFRFP+++NVVA                      G+W  
Sbjct: 387 IWLRGKKVKQNSPEDSSRRAFSFRFPVNKNVVA---------------------DGQW-- 423

Query: 924 GGSELGCDEENQSCNSLDSQ 983
                GCDE+NQSCNSL+ Q
Sbjct: 424 -----GCDEQNQSCNSLELQ 438



 Score = 76.6 bits (187), Expect = 9e-12
 Identities = 35/67 (52%), Positives = 42/67 (62%)
 Frame = +3

Query: 3   FILRPPNRXXXXXXXAIAXXXXXXXXXXXXDSGVDQSFIDTLPIFNYKAIIGVKTPFNCV 182
           F+ RPPNR         A            D+GVDQ+FID LP+F+YKAIIG+K PF+C 
Sbjct: 72  FLSRPPNRETDDLESVTALQGQLQQLFHLHDAGVDQTFIDALPVFHYKAIIGLKNPFDCA 131

Query: 183 VCLCEFE 203
           VCLCEFE
Sbjct: 132 VCLCEFE 138


>ref|XP_003542294.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 finger protein ATL13-like,
            partial [Glycine max]
          Length = 524

 Score =  214 bits (545), Expect = 3e-53
 Identities = 137/277 (49%), Positives = 167/277 (60%), Gaps = 24/277 (8%)
 Frame = +3

Query: 222  SNSVARANSHLGVHCHEEFGSSRIEILPKSCXXXXXXXXXXXXXXXXXXXXXXXXLGKFK 401
            ++SV  ANS LG     EFGS+R+++  KS                         LGKF+
Sbjct: 221  TSSVITANSRLGCRGDSEFGSTRVDL--KS--GELFSEIPDPTVQNGVEKVVTVKLGKFR 276

Query: 402  NVDXXXXXXXXXXXX------VDARRCFSMGSFEYVMDENTSLQVPIRTPMKKQSSKKPC 563
            +VD                  VDARRCFSMGSF YVMDE++SLQVPIRTP+KKQSSKK  
Sbjct: 277  SVDGGGGGGDGGGEGTSSINNVDARRCFSMGSFAYVMDESSSLQVPIRTPIKKQSSKKKS 336

Query: 564  -LPLIPGHKPAMSECDCDSRRDFN--GLEAFNSVD----IHGGTNTSISI-GYGDNKIGR 719
             LPL PGH+PAMSECDC+SRRDF   G +A   V+      G T  S +  G     IGR
Sbjct: 337  GLPLTPGHRPAMSECDCESRRDFKFAGFDATTIVEDDAASTGATTASTTCNGNSAAAIGR 396

Query: 720  SKRESFSVSKIWLRGKKEKPNSTTGES--AFSFRFPLHRNVVAA-------DEMKPKNEG 872
            S++ESFS+SKIWLRGKK+KPN+    S  A SFRFP+  +VVAA       D++K KN  
Sbjct: 397  SRKESFSISKIWLRGKKDKPNAGADSSRRAVSFRFPVKSSVVAAASGSADDDDLKGKNCK 456

Query: 873  SDTRRSTSEIDTGRWENG-GSELGCDEENQSCNSLDS 980
             DTR + SE+D G+WENG G+E   DEENQSC S+DS
Sbjct: 457  FDTRSTMSEMDIGKWENGRGTEFDYDEENQSCYSMDS 493



 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 35/68 (51%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
 Frame = +3

Query: 3   FILRPPNRXXXXXXXAIAXXXXXXXXXXXXDSGVDQSFIDTLPIFNYKAIIGVKT-PFNC 179
           F+ RP  R         A            D+GVDQSFIDTLP+F YKAIIG+K  PF+C
Sbjct: 75  FLWRPQTREPDELDNVTALQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKKYPFDC 134

Query: 180 VVCLCEFE 203
            VCLCEFE
Sbjct: 135 AVCLCEFE 142