BLASTX nr result

ID: Panax21_contig00001804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001804
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606819.1| Calreticulin-3 [Medicago truncatula] gi|3555...   217   7e-55
ref|XP_002309786.1| predicted protein [Populus trichocarpa] gi|2...   216   2e-54
ref|XP_003541149.1| PREDICTED: calreticulin-3-like [Glycine max]      216   2e-54
ref|XP_002327993.1| predicted protein [Populus trichocarpa] gi|2...   215   3e-54
ref|XP_003534500.1| PREDICTED: calreticulin-3-like [Glycine max]      214   8e-54

>ref|XP_003606819.1| Calreticulin-3 [Medicago truncatula] gi|355507874|gb|AES89016.1|
           Calreticulin-3 [Medicago truncatula]
           gi|388510880|gb|AFK43506.1| unknown [Medicago
           truncatula]
          Length = 420

 Score =  217 bits (553), Expect = 7e-55
 Identities = 101/159 (63%), Positives = 117/159 (73%)
 Frame = -2

Query: 477 EGYDNXXXXXXXXXXXXXXXXXXXXDGVWRPPKVPNPAYRGPWKRKKIKNPNYKGKWKIP 298
           EGYD+                    DG+W+P K+PNPAYRGPWKRKKIKNPNYKGKWK P
Sbjct: 239 EGYDSIPAEIPDPKAKKPADWDDEDDGLWKPSKIPNPAYRGPWKRKKIKNPNYKGKWKTP 298

Query: 297 WFDNPEFEDDPELYVLKPIKYVGIEVWQVKAGSVFDNILICDDPKYAKQVVEEIWAQNRX 118
           W DNPEFEDDP+LYVLKPIKYVGIEVWQVKAGS++DNILICDDP+YAKQ+VEE    NR 
Sbjct: 299 WIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSIYDNILICDDPQYAKQIVEEYMVNNRE 358

Query: 117 XXXXXXXXXEKVRRAQEEEDAKRKGKDGEKKRHDRGRRH 1
                    EK RRA+EEE+AKR  ++GEK+R +RG R+
Sbjct: 359 AEKEAFEEAEKERRAREEEEAKRAREEGEKRRRERGSRY 397


>ref|XP_002309786.1| predicted protein [Populus trichocarpa] gi|222852689|gb|EEE90236.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score =  216 bits (550), Expect = 2e-54
 Identities = 100/158 (63%), Positives = 121/158 (76%)
 Frame = -2

Query: 477 EGYDNXXXXXXXXXXXXXXXXXXXXDGVWRPPKVPNPAYRGPWKRKKIKNPNYKGKWKIP 298
           EGYD+                    DG+WRPPK+PNPAY+GPWKRKKIKNPNYKGKWK P
Sbjct: 249 EGYDSIPREIPDPKAKEPDNWDEEEDGIWRPPKIPNPAYKGPWKRKKIKNPNYKGKWKTP 308

Query: 297 WFDNPEFEDDPELYVLKPIKYVGIEVWQVKAGSVFDNILICDDPKYAKQVVEEIWAQNRX 118
           W DNPEFEDDP+LYVLKPIKYVGIEVWQVKAGS+FDNILICDDP+YA+++V++++ QNR 
Sbjct: 309 WIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSIFDNILICDDPQYAREIVKDVF-QNRE 367

Query: 117 XXXXXXXXXEKVRRAQEEEDAKRKGKDGEKKRHDRGRR 4
                    EKVRRA+EEE+A+R  ++GEK+R +RG R
Sbjct: 368 IEKDAFEEAEKVRRAREEEEAQRAREEGEKRRKERGYR 405


>ref|XP_003541149.1| PREDICTED: calreticulin-3-like [Glycine max]
          Length = 418

 Score =  216 bits (549), Expect = 2e-54
 Identities = 99/159 (62%), Positives = 119/159 (74%)
 Frame = -2

Query: 477 EGYDNXXXXXXXXXXXXXXXXXXXXDGVWRPPKVPNPAYRGPWKRKKIKNPNYKGKWKIP 298
           EGYD+                    DG+W+PPK+PNPAY+GPWKRKKIKNPNYKGKWKIP
Sbjct: 239 EGYDSIPAEIPDPKAKKPVEWDDEDDGLWKPPKIPNPAYKGPWKRKKIKNPNYKGKWKIP 298

Query: 297 WFDNPEFEDDPELYVLKPIKYVGIEVWQVKAGSVFDNILICDDPKYAKQVVEEIWAQNRX 118
           W DNPEFEDDP+LYVLKPIKYVGIEVWQVKAGSV+DNILICDDP+YAKQ+V+E  A NR 
Sbjct: 299 WIDNPEFEDDPDLYVLKPIKYVGIEVWQVKAGSVYDNILICDDPQYAKQIVDEFMANNRE 358

Query: 117 XXXXXXXXXEKVRRAQEEEDAKRKGKDGEKKRHDRGRRH 1
                    EK RRA+EEE+A+R  ++GE++R +R  ++
Sbjct: 359 AEKEAFEEAEKERRAREEEEAQRAREEGERRRKERDHKY 397


>ref|XP_002327993.1| predicted protein [Populus trichocarpa] gi|222837402|gb|EEE75781.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score =  215 bits (548), Expect = 3e-54
 Identities = 100/158 (63%), Positives = 120/158 (75%)
 Frame = -2

Query: 477 EGYDNXXXXXXXXXXXXXXXXXXXXDGVWRPPKVPNPAYRGPWKRKKIKNPNYKGKWKIP 298
           EGYD+                    DG+WRP K+PNPAY+GPWKRKKIKNPNYKGKWK P
Sbjct: 249 EGYDSIPREIPDPKAKEPDDWDEEEDGIWRPSKIPNPAYKGPWKRKKIKNPNYKGKWKTP 308

Query: 297 WFDNPEFEDDPELYVLKPIKYVGIEVWQVKAGSVFDNILICDDPKYAKQVVEEIWAQNRX 118
           W DNPEFEDDP+LYVLKP+KYVGIEVWQVKAGS+FDNILICDDP+YA++VVE+++ QNR 
Sbjct: 309 WIDNPEFEDDPDLYVLKPVKYVGIEVWQVKAGSIFDNILICDDPQYAREVVEDVF-QNRE 367

Query: 117 XXXXXXXXXEKVRRAQEEEDAKRKGKDGEKKRHDRGRR 4
                    EKVRRA+EEE+A+R  ++GEK+R +RG R
Sbjct: 368 IEKDAFEEAEKVRRAREEEEAQRAREEGEKRRKERGHR 405


>ref|XP_003534500.1| PREDICTED: calreticulin-3-like [Glycine max]
          Length = 422

 Score =  214 bits (544), Expect = 8e-54
 Identities = 101/156 (64%), Positives = 117/156 (75%)
 Frame = -2

Query: 477 EGYDNXXXXXXXXXXXXXXXXXXXXDGVWRPPKVPNPAYRGPWKRKKIKNPNYKGKWKIP 298
           EGYD+                    DG W+PPK+PNPAY+GPWKRKKIKNPNYKGKWK P
Sbjct: 241 EGYDSIPREIPDPNAKEPENWDEEEDGKWKPPKIPNPAYKGPWKRKKIKNPNYKGKWKTP 300

Query: 297 WFDNPEFEDDPELYVLKPIKYVGIEVWQVKAGSVFDNILICDDPKYAKQVVEEIWAQNRX 118
           W DNPEFEDDP+LYVLKPIKYVGIEVWQVK GSVFDN+LICDDP YAKQVVEE++A NR 
Sbjct: 301 WIDNPEFEDDPDLYVLKPIKYVGIEVWQVKGGSVFDNVLICDDPDYAKQVVEEVFA-NRE 359

Query: 117 XXXXXXXXXEKVRRAQEEEDAKRKGKDGEKKRHDRG 10
                    EKVR+A+EEE+A+R  ++GEK+R +RG
Sbjct: 360 IEKEGFEEAEKVRKAKEEEEAQRAREEGEKRRRERG 395


Top