BLASTX nr result
ID: Panax21_contig00001802
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00001802
(1790 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containi... 812 0.0
emb|CBI22243.3| unnamed protein product [Vitis vinifera] 775 0.0
ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containi... 768 0.0
ref|XP_002324070.1| predicted protein [Populus trichocarpa] gi|2... 758 0.0
ref|XP_003551738.1| PREDICTED: pentatricopeptide repeat-containi... 664 0.0
>ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15300-like
[Vitis vinifera]
Length = 550
Score = 812 bits (2097), Expect = 0.0
Identities = 399/542 (73%), Positives = 464/542 (85%), Gaps = 1/542 (0%)
Frame = -2
Query: 1750 MIRKRTTGSS-DQHHRSTLWGKCTNLRSLKQTHAFMIINGFNSDRSALRELIYISAVALS 1574
MIRKR T S + RS LW CT + +LKQ HA MI+ GFNS+ SALRELIY S++A+S
Sbjct: 1 MIRKRLTDKSPSRQQRSQLWRSCTTIGTLKQIHASMIVKGFNSNTSALRELIYASSIAIS 60
Query: 1573 STIHYACQLFAQITKPDLYMWNTMMRGSAQSPNPLMAVSLYSQMEKQGVRPDNYTFPCLL 1394
T+ YA QLF IT+PD +MWNTM+RGSAQSP+PL A+SLYSQME VRPD +TFP +L
Sbjct: 61 GTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVL 120
Query: 1393 KACTKLSWVKVGCVIHGKITKHGFESNTFARNTLIYFHANCGDIKVASALFDESAKRDVV 1214
KACT+L WVK+G +HG++ + GFESNTF RNTLIYFHANCGD+ VA ALFD SAKRDVV
Sbjct: 121 KACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVV 180
Query: 1213 PWSALTAGYARRGDLVKARQLFNEMPVKDLVSWNVMITGYAKRGEMESAKDLFNEVPKRD 1034
WSALTAGYARRG+L ARQLF+EMPVKDLVSWNVMITGYAKRGEMESA+ LF+EVPKRD
Sbjct: 181 AWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRD 240
Query: 1033 VVTWNAMIAGYVLHGLHKKAFEMFDEMIGLGELPDEVTMLSLLTSCANSGALEVGEKIHS 854
VVTWNAMIAGYVL G +++A EMF+EM +GELPDEVTMLSLL++C + G L+ G++IH
Sbjct: 241 VVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHC 300
Query: 853 SILEMGEGDLSIVIGNALIDMYAKCGSIEKATSVFRVMREKLVSTWNSIIVGLAFHGHSE 674
I EMG DLS+++GNALIDMYAKCGSI +A VF+ MREK VSTWNS++ GLAFHGH+E
Sbjct: 301 CISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAE 360
Query: 673 ESICLFKEMRRMNIIPNEITFVGVLIACSHAGTVEEGRRFFRLMRDEYNIEPNIRHHGCM 494
+SI LF EMR++ I P+EITFVGVL+ACSHAG VEEGR++F LMRDEYNIEPNIRH+GCM
Sbjct: 361 KSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCM 420
Query: 493 VDMLGRAGLLNEAFEFIDTMEIEPNGIVWRTLLGACRVHNNVELARRANERLLKLRWDES 314
VD+LGRAGLLNEAF+FIDTM+IEPN IVWRTLLGACR+H NVEL RRAN +LLK+R DES
Sbjct: 421 VDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQLLKMRHDES 480
Query: 313 GDYVLLSNVYASRGQWDGVERVRKLMDDSGVRKEPGFSLIEADNKALMHFLLDSKPQKNS 134
GDYVLLSN+YASRG+WDGVE+VRKLMDDSGVRKE G SLIE DNKALMHFL DSKP+ NS
Sbjct: 481 GDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCSLIEGDNKALMHFLFDSKPKLNS 540
Query: 133 RR 128
R+
Sbjct: 541 RK 542
>emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 775 bits (2002), Expect = 0.0
Identities = 378/501 (75%), Positives = 438/501 (87%)
Frame = -2
Query: 1648 MIINGFNSDRSALRELIYISAVALSSTIHYACQLFAQITKPDLYMWNTMMRGSAQSPNPL 1469
MI+ GFNS+ SALRELIY S++A+S T+ YA QLF IT+PD +MWNTM+RGSAQSP+PL
Sbjct: 1 MIVKGFNSNTSALRELIYASSIAISGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPL 60
Query: 1468 MAVSLYSQMEKQGVRPDNYTFPCLLKACTKLSWVKVGCVIHGKITKHGFESNTFARNTLI 1289
A+SLYSQME VRPD +TFP +LKACT+L WVK+G +HG++ + GFESNTF RNTLI
Sbjct: 61 NAISLYSQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLI 120
Query: 1288 YFHANCGDIKVASALFDESAKRDVVPWSALTAGYARRGDLVKARQLFNEMPVKDLVSWNV 1109
YFHANCGD+ VA ALFD SAKRDVV WSALTAGYARRG+L ARQLF+EMPVKDLVSWNV
Sbjct: 121 YFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNV 180
Query: 1108 MITGYAKRGEMESAKDLFNEVPKRDVVTWNAMIAGYVLHGLHKKAFEMFDEMIGLGELPD 929
MITGYAKRGEMESA+ LF+EVPKRDVVTWNAMIAGYVL G +++A EMF+EM +GELPD
Sbjct: 181 MITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPD 240
Query: 928 EVTMLSLLTSCANSGALEVGEKIHSSILEMGEGDLSIVIGNALIDMYAKCGSIEKATSVF 749
EVTMLSLL++C + G L+ G++IH I EMG DLS+++GNALIDMYAKCGSI +A VF
Sbjct: 241 EVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVF 300
Query: 748 RVMREKLVSTWNSIIVGLAFHGHSEESICLFKEMRRMNIIPNEITFVGVLIACSHAGTVE 569
+ MREK VSTWNS++ GLAFHGH+E+SI LF EMR++ I P+EITFVGVL+ACSHAG VE
Sbjct: 301 QGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVE 360
Query: 568 EGRRFFRLMRDEYNIEPNIRHHGCMVDMLGRAGLLNEAFEFIDTMEIEPNGIVWRTLLGA 389
EGR++F LMRDEYNIEPNIRH+GCMVD+LGRAGLLNEAF+FIDTM+IEPN IVWRTLLGA
Sbjct: 361 EGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGA 420
Query: 388 CRVHNNVELARRANERLLKLRWDESGDYVLLSNVYASRGQWDGVERVRKLMDDSGVRKEP 209
CR+H NVEL RRAN +LLK+R DESGDYVLLSN+YASRG+WDGVE+VRKLMDDSGVRKE
Sbjct: 421 CRIHGNVELGRRANMQLLKMRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEA 480
Query: 208 GFSLIEADNKALMHFLLDSKP 146
G SLIE DNKALMHFL DSKP
Sbjct: 481 GCSLIEGDNKALMHFLFDSKP 501
>ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15300-like
[Cucumis sativus]
Length = 542
Score = 768 bits (1983), Expect = 0.0
Identities = 375/536 (69%), Positives = 450/536 (83%), Gaps = 1/536 (0%)
Frame = -2
Query: 1750 MIRKRTTGSS-DQHHRSTLWGKCTNLRSLKQTHAFMIINGFNSDRSALRELIYISAVALS 1574
MIRKRT +S ++ +S+LW KCTN RSLKQ HAF+I+NG NS S LRELI++SA+ +S
Sbjct: 1 MIRKRTNDNSFNRFQQSSLWQKCTNFRSLKQLHAFLIVNGLNSTTSVLRELIFVSAIVVS 60
Query: 1573 STIHYACQLFAQITKPDLYMWNTMMRGSAQSPNPLMAVSLYSQMEKQGVRPDNYTFPCLL 1394
T+ YA QLFAQI++PD++MWNTM+RGSAQ+ P AVSLY+QME +GVRPD +TF +L
Sbjct: 61 GTMDYAHQLFAQISQPDIFMWNTMIRGSAQTLKPATAVSLYTQMENRGVRPDKFTFSFVL 120
Query: 1393 KACTKLSWVKVGCVIHGKITKHGFESNTFARNTLIYFHANCGDIKVASALFDESAKRDVV 1214
KACTKLSWVK+G IHGK+ K GF+SNTF RNTLIYFHANCGD+ A ALFD SAKR+VV
Sbjct: 121 KACTKLSWVKLGFGIHGKVLKSGFQSNTFVRNTLIYFHANCGDLATARALFDASAKREVV 180
Query: 1213 PWSALTAGYARRGDLVKARQLFNEMPVKDLVSWNVMITGYAKRGEMESAKDLFNEVPKRD 1034
PWSALTAGYARRG L ARQLF+EMP+KDLVSWNVMIT YAK GEME A+ LF+EVPK+D
Sbjct: 181 PWSALTAGYARRGKLDVARQLFDEMPMKDLVSWNVMITAYAKHGEMEKARKLFDEVPKKD 240
Query: 1033 VVTWNAMIAGYVLHGLHKKAFEMFDEMIGLGELPDEVTMLSLLTSCANSGALEVGEKIHS 854
VVTWNAMIAGYVL L+K+A EMFD M LG+ PD+VTMLS+L++ A+ G LE+G+KIH
Sbjct: 241 VVTWNAMIAGYVLSRLNKEALEMFDAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIHR 300
Query: 853 SILEMGEGDLSIVIGNALIDMYAKCGSIEKATSVFRVMREKLVSTWNSIIVGLAFHGHSE 674
SI +M GDLS+++ NALIDMYAKCGSI A VF+ MR+K S+WNSII GLA HGH+E
Sbjct: 301 SIFDMCCGDLSVLLSNALIDMYAKCGSIGNALEVFQGMRKKDTSSWNSIIGGLALHGHAE 360
Query: 673 ESICLFKEMRRMNIIPNEITFVGVLIACSHAGTVEEGRRFFRLMRDEYNIEPNIRHHGCM 494
ESI LF+EM R+ + PNEITFV VL+ACSHAG V EGR +F LM++ + IEPNI+H+GCM
Sbjct: 361 ESINLFQEMLRLKMKPNEITFVAVLVACSHAGKVREGRMYFNLMKNVFKIEPNIKHYGCM 420
Query: 493 VDMLGRAGLLNEAFEFIDTMEIEPNGIVWRTLLGACRVHNNVELARRANERLLKLRWDES 314
VD+LGRAGLL EAF+FIDTMEIEPN I+WRTLLGACRVH +VEL RRANE+LLK+R DES
Sbjct: 421 VDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRANEQLLKMRKDES 480
Query: 313 GDYVLLSNVYASRGQWDGVERVRKLMDDSGVRKEPGFSLIEADNKALMHFLLDSKP 146
GDYVLLSN+YAS+G+WDGV++VRKLMDD GV+K+ G SLI++DN LMHFL DSKP
Sbjct: 481 GDYVLLSNIYASQGEWDGVQKVRKLMDDGGVKKKVGHSLIDSDNSFLMHFLFDSKP 536
>ref|XP_002324070.1| predicted protein [Populus trichocarpa] gi|222867072|gb|EEF04203.1|
predicted protein [Populus trichocarpa]
Length = 546
Score = 758 bits (1958), Expect = 0.0
Identities = 369/545 (67%), Positives = 446/545 (81%), Gaps = 2/545 (0%)
Frame = -2
Query: 1750 MIRKRTTG-SSDQHHRSTLWGKCTNLRSLKQTHAFMIINGFNSDRSALRELIYISAVALS 1574
MIRKRT S+++ S+LW C NL +LKQ HA +II GFNS+R+ALRELI+ A+ +S
Sbjct: 1 MIRKRTNDRSTNRKQPSSLWKNCNNLLALKQIHATLIIKGFNSNRAALRELIFAGAMTIS 60
Query: 1573 STIHYACQLFAQITKPDLYMWNTMMRGSAQSPNPLMAVSLYSQMEKQGVRPDNYTFPCLL 1394
I+YA Q+FAQIT+PD++MWNTMMRGS+QS NP V LY+QME +GV+PD +TF LL
Sbjct: 61 GAINYAHQVFAQITEPDIFMWNTMMRGSSQSKNPSKVVLLYTQMENRGVKPDKFTFSFLL 120
Query: 1393 KACTKLSWVKVGCVIHGKITKHGFESNTFARNTLIYFHANCGDIKVASALFDESAKRDVV 1214
K CT+L W K G +HGK+ K+GFE N+F RNTLIYFH+NCGD+ +A ++F + +R VV
Sbjct: 121 KGCTRLEWRKTGFCVHGKVLKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPERSVV 180
Query: 1213 PWSALTAGYARRGDLVKARQLFNEMPVKDLVSWNVMITGYAKRGEMESAKDLFNEVPKRD 1034
WSALTAGYARRG+L ARQ+F+EMPVKDLVSWNVMITGY K GEME+A+ LF+E P++D
Sbjct: 181 SWSALTAGYARRGELGVARQIFDEMPVKDLVSWNVMITGYVKNGEMENARTLFDEAPEKD 240
Query: 1033 VVTWNAMIAGYVLHGLHKKAFEMFDEMIGLGELPDEVTMLSLLTSCANSGALEVGEKIHS 854
VVTWN MIAGYVL G ++A EMF+EM +GE PDEVTMLSLL++CA+ G L+VG K+H
Sbjct: 241 VVTWNTMIAGYVLRGEQRQALEMFEEMRNVGECPDEVTMLSLLSACADLGDLQVGRKLHC 300
Query: 853 SILEMGEGDLSIVIGNALIDMYAKCGSIEKATSVFRVMREKLVSTWNSIIVGLAFHGHSE 674
SI EM GDLS+++GNAL+DMYAKCGSIE A VF+ MREK V+TWNS+I GLAFHGH+E
Sbjct: 301 SISEMTRGDLSVLLGNALVDMYAKCGSIEIALQVFKKMREKDVTTWNSVIGGLAFHGHAE 360
Query: 673 ESICLFKEMRRM-NIIPNEITFVGVLIACSHAGTVEEGRRFFRLMRDEYNIEPNIRHHGC 497
ESI LF EM+ + NI PNEITFVGV++ACSHAG VEEGRR+F+LMR+ Y+IEPN+ HHGC
Sbjct: 361 ESIKLFAEMQALKNIKPNEITFVGVIVACSHAGNVEEGRRYFKLMRERYDIEPNMIHHGC 420
Query: 496 MVDMLGRAGLLNEAFEFIDTMEIEPNGIVWRTLLGACRVHNNVELARRANERLLKLRWDE 317
MVD+LGRAGLL+EAFE I MEIEPN I+WRTLLGACRVH NVEL R ANERLLKLR DE
Sbjct: 421 MVDLLGRAGLLSEAFELIAKMEIEPNAIIWRTLLGACRVHGNVELGRLANERLLKLRRDE 480
Query: 316 SGDYVLLSNVYASRGQWDGVERVRKLMDDSGVRKEPGFSLIEADNKALMHFLLDSKPQKN 137
SGDYVLLSN+YAS G+WDG E VRKLMDD GVRKE G SLIEAD++A+M FL D KP+ N
Sbjct: 481 SGDYVLLSNIYASAGEWDGAEEVRKLMDDGGVRKEAGRSLIEADDRAVMQFLFDPKPKLN 540
Query: 136 SRRSI 122
SR +
Sbjct: 541 SRGQV 545
>ref|XP_003551738.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15300-like
[Glycine max]
Length = 518
Score = 664 bits (1713), Expect = 0.0
Identities = 322/527 (61%), Positives = 416/527 (78%), Gaps = 6/527 (1%)
Frame = -2
Query: 1750 MIRKRTTGSSDQHHRSTLWGKCTNLRSLKQTHAFMIINGFNSDRSALRELIYISAVAL-- 1577
MIRKR RST+ TN+ +LKQ HA MI+NG S+ LR+L+ +A+++
Sbjct: 1 MIRKR-------RGRSTI----TNVGTLKQIHALMIVNGLTSNVGFLRKLVLTTAMSMVG 49
Query: 1576 ----SSTIHYACQLFAQITKPDLYMWNTMMRGSAQSPNPLMAVSLYSQMEKQGVRPDNYT 1409
S+ I YA Q+FAQI +PD +MWNT +RGS+QS +P+ AV+LY+QM+++ V+PDN+T
Sbjct: 50 PNATSAVIRYALQMFAQIPQPDTFMWNTYIRGSSQSHDPVHAVALYAQMDQRSVKPDNFT 109
Query: 1408 FPCLLKACTKLSWVKVGCVIHGKITKHGFESNTFARNTLIYFHANCGDIKVASALFDESA 1229
FP +LKACTKL WV G +HG++ + GF SN RNTL+ FHA CGD+KVA+ +FD+S
Sbjct: 110 FPFVLKACTKLFWVNTGSAVHGRVLRLGFGSNVVVRNTLLVFHAKCGDLKVATDIFDDSD 169
Query: 1228 KRDVVPWSALTAGYARRGDLVKARQLFNEMPVKDLVSWNVMITGYAKRGEMESAKDLFNE 1049
K DVV WSAL AGYA+RGDL AR+LF+EMP +DLVSWNVMIT Y K GEMESA+ LF+E
Sbjct: 170 KGDVVAWSALIAGYAQRGDLSVARKLFDEMPKRDLVSWNVMITVYTKHGEMESARRLFDE 229
Query: 1048 VPKRDVVTWNAMIAGYVLHGLHKKAFEMFDEMIGLGELPDEVTMLSLLTSCANSGALEVG 869
P +D+V+WNA+I GYVL L+++A E+FDEM G+GE PDEVTMLSLL++CA+ G LE G
Sbjct: 230 APMKDIVSWNALIGGYVLRNLNREALELFDEMCGVGECPDEVTMLSLLSACADLGDLESG 289
Query: 868 EKIHSSILEMGEGDLSIVIGNALIDMYAKCGSIEKATSVFRVMREKLVSTWNSIIVGLAF 689
EK+H+ I+EM +G LS ++GNAL+DMYAKCG+I KA VF ++R+K V +WNS+I GLAF
Sbjct: 290 EKVHAKIIEMNKGKLSTLLGNALVDMYAKCGNIGKAVRVFWLIRDKDVVSWNSVISGLAF 349
Query: 688 HGHSEESICLFKEMRRMNIIPNEITFVGVLIACSHAGTVEEGRRFFRLMRDEYNIEPNIR 509
HGH+EES+ LF+EM+ + P+E+TFVGVL ACSHAG V+EG R+F LM+++Y IEP IR
Sbjct: 350 HGHAEESLGLFREMKMTKVCPDEVTFVGVLAACSHAGNVDEGNRYFHLMKNKYKIEPTIR 409
Query: 508 HHGCMVDMLGRAGLLNEAFEFIDTMEIEPNGIVWRTLLGACRVHNNVELARRANERLLKL 329
H GC+VDMLGRAGLL EAF FI +M+IEPN IVWR+LLGAC+VH +VELA+RANE+LL++
Sbjct: 410 HCGCVVDMLGRAGLLKEAFNFIASMKIEPNAIVWRSLLGACKVHGDVELAKRANEQLLRM 469
Query: 328 RWDESGDYVLLSNVYASRGQWDGVERVRKLMDDSGVRKEPGFSLIEA 188
R D+SGDYVLLSNVYAS+G+WDG E VRKLMDD+GV K G S +EA
Sbjct: 470 RGDQSGDYVLLSNVYASQGEWDGAENVRKLMDDNGVTKNRGSSFVEA 516