BLASTX nr result

ID: Panax21_contig00001774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001774
         (810 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267137.2| PREDICTED: uncharacterized protein LOC100266...   334   2e-89
emb|CAN66568.1| hypothetical protein VITISV_039539 [Vitis vinifera]   334   2e-89
emb|CBI37358.3| unnamed protein product [Vitis vinifera]              287   2e-75
ref|XP_002530649.1| conserved hypothetical protein [Ricinus comm...   272   7e-71
ref|XP_002304281.1| predicted protein [Populus trichocarpa] gi|2...   265   7e-69

>ref|XP_002267137.2| PREDICTED: uncharacterized protein LOC100266068 [Vitis vinifera]
          Length = 2292

 Score =  334 bits (856), Expect = 2e-89
 Identities = 168/274 (61%), Positives = 213/274 (77%), Gaps = 5/274 (1%)
 Frame = +3

Query: 3    ALGDTSVVRAWHLRPTLTWQDGEWIEWSGARQRFPS--QGDAPQEKRAKLGSPAIEAKGK 176
            A G+TSVVRAWHLRP+L W+DGEWIEWS +R+   +  +GD PQEKR KLGSPA+EAKGK
Sbjct: 1919 AQGETSVVRAWHLRPSLIWKDGEWIEWSSSRENDHTVHEGDTPQEKRLKLGSPAVEAKGK 1978

Query: 177  DKIPSGVDLVQSRKHEESRLLPLSASEIEFNVGMNTRHDNKLDAQRTMRTGLQKEGSRVV 356
            DK+   +D V + K EE  LL LS ++  FNVG NTR +NK DA R +RTGLQKEGSRV+
Sbjct: 1979 DKMSKNIDAVDNEKPEEPGLLALSGNDKIFNVGKNTRDENKPDAPRMIRTGLQKEGSRVI 2038

Query: 357  FGVPKPGKKRKFMDVSKHFDSDQSSKNLKTSDSVKFARYLMPQGSGSRGWKNSTKIDVKE 536
            FGVPKPGKKRKFM+VSKH+ +D+S+K  + +DSVKFA+YL+PQGSG RGWKN++KID KE
Sbjct: 2039 FGVPKPGKKRKFMEVSKHYVADRSNKISEANDSVKFAKYLIPQGSGPRGWKNTSKIDSKE 2098

Query: 537  KQAPEDRPKVIRSGKPPSVSQGAVPQKDN-LTSAKSAPRDVSMTDQIP--EDSIGNEENN 707
            K+A E +PKVIRSGKP +VS   VP+KDN L S  SA  D ++TD +P  +DS+ ++EN 
Sbjct: 2099 KRAVESKPKVIRSGKPQNVSSRTVPRKDNLLASGTSASNDTNVTDNLPNIKDSVSHDENA 2158

Query: 708  AGQQNLLEFGSFSNSQDTSEGSTLVSSLGLPQVA 809
            +G+QN++EF SFSN++  +EG  L SSL LP  A
Sbjct: 2159 SGKQNVIEFESFSNTEGQAEGPILFSSLPLPSDA 2192


>emb|CAN66568.1| hypothetical protein VITISV_039539 [Vitis vinifera]
          Length = 2321

 Score =  334 bits (856), Expect = 2e-89
 Identities = 168/274 (61%), Positives = 213/274 (77%), Gaps = 5/274 (1%)
 Frame = +3

Query: 3    ALGDTSVVRAWHLRPTLTWQDGEWIEWSGARQRFPS--QGDAPQEKRAKLGSPAIEAKGK 176
            A G+TSVVRAWHLRP+L W+DGEWIEWS +R+   +  +GD PQEKR KLGSPA+EAKGK
Sbjct: 1905 AQGETSVVRAWHLRPSLIWKDGEWIEWSSSRENDHTVHEGDTPQEKRLKLGSPAVEAKGK 1964

Query: 177  DKIPSGVDLVQSRKHEESRLLPLSASEIEFNVGMNTRHDNKLDAQRTMRTGLQKEGSRVV 356
            DK+   +D V + K EE  LL LS ++  FNVG NTR +NK DA R +RTGLQKEGSRV+
Sbjct: 1965 DKMSKNIDAVDNEKPEEPGLLALSGNDKIFNVGKNTRDENKPDAPRMIRTGLQKEGSRVI 2024

Query: 357  FGVPKPGKKRKFMDVSKHFDSDQSSKNLKTSDSVKFARYLMPQGSGSRGWKNSTKIDVKE 536
            FGVPKPGKKRKFM+VSKH+ +D+S+K  + +DSVKFA+YL+PQGSG RGWKN++KID KE
Sbjct: 2025 FGVPKPGKKRKFMEVSKHYVADRSNKISEANDSVKFAKYLIPQGSGPRGWKNTSKIDSKE 2084

Query: 537  KQAPEDRPKVIRSGKPPSVSQGAVPQKDN-LTSAKSAPRDVSMTDQIP--EDSIGNEENN 707
            K+A E +PKVIRSGKP +VS   VP+KDN L S  SA  D ++TD +P  +DS+ ++EN 
Sbjct: 2085 KRAVESKPKVIRSGKPQNVSSRTVPRKDNLLASGTSASNDTNVTDNLPNIKDSVSHDENA 2144

Query: 708  AGQQNLLEFGSFSNSQDTSEGSTLVSSLGLPQVA 809
            +G+QN++EF SFSN++  +EG  L SSL LP  A
Sbjct: 2145 SGKQNVIEFESFSNTEGQAEGPILFSSLPLPSDA 2178


>emb|CBI37358.3| unnamed protein product [Vitis vinifera]
          Length = 1979

 Score =  287 bits (735), Expect = 2e-75
 Identities = 143/222 (64%), Positives = 175/222 (78%), Gaps = 3/222 (1%)
 Frame = +3

Query: 3    ALGDTSVVRAWHLRPTLTWQDGEWIEWSGARQRFPS--QGDAPQEKRAKLGSPAIEAKGK 176
            A G+TSVVRAWHLRP+L W+DGEWIEWS +R+   +  +GD PQEKR KLGSPA+EAKGK
Sbjct: 1640 AQGETSVVRAWHLRPSLIWKDGEWIEWSSSRENDHTVHEGDTPQEKRLKLGSPAVEAKGK 1699

Query: 177  DKIPSGVDLVQSRKHEESRLLPLSASEIEFNVGMNTRHDNKLDAQRTMRTGLQKEGSRVV 356
            DK+   +D V + K EE  LL LS ++  FNVG NTR +NK DA R +RTGLQKEGSRV+
Sbjct: 1700 DKMSKNIDAVDNEKPEEPGLLALSGNDKIFNVGKNTRDENKPDAPRMIRTGLQKEGSRVI 1759

Query: 357  FGVPKPGKKRKFMDVSKHFDSDQSSKNLKTSDSVKFARYLMPQGSGSRGWKNSTKIDVKE 536
            FGVPKPGKKRKFM+VSKH+ +D+S+K  + +DSVKFA+YL+PQGSG RGWKN++KID KE
Sbjct: 1760 FGVPKPGKKRKFMEVSKHYVADRSNKISEANDSVKFAKYLIPQGSGPRGWKNTSKIDSKE 1819

Query: 537  KQAPEDRPKVIRSGKPPSVSQGAVPQKDN-LTSAKSAPRDVS 659
            K+A E +PKVIRSGKP +VS   VP+KDN L S  SA  D +
Sbjct: 1820 KRAVESKPKVIRSGKPQNVSSRTVPRKDNLLASGTSASNDTN 1861


>ref|XP_002530649.1| conserved hypothetical protein [Ricinus communis]
            gi|223529782|gb|EEF31718.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2104

 Score =  272 bits (695), Expect = 7e-71
 Identities = 138/269 (51%), Positives = 189/269 (70%), Gaps = 5/269 (1%)
 Frame = +3

Query: 9    GDTSVVRAWHLRPTLTWQDGEWIEWS--GARQRFPSQGDAPQEKRAKLGSPAIEAKGKDK 182
            G+   V  W++RP+L W+DGEWIEWS  G + R   +GD PQEKR ++ S  +EAKGKDK
Sbjct: 1736 GEVVAVSKWNIRPSLIWKDGEWIEWSNSGQKNRSSHEGDTPQEKRPRVRSSLVEAKGKDK 1795

Query: 183  IPSGVDLVQSRKHEESRLLPLSASEIEFNVGMNTRHDNKLDAQRTMRTGLQKEGSRVVFG 362
                +D  +S K ++  LL LS  E  FNVG +++  N+ DA R  RTGLQKEGSRV+FG
Sbjct: 1796 ASKTIDATESDKSDDPTLLALSGDEKLFNVGKSSKDGNRTDALRMTRTGLQKEGSRVIFG 1855

Query: 363  VPKPGKKRKFMDVSKHFDSDQSSKNLKTSDSVKFARYLMPQGSGSRGWKNSTKIDVKEKQ 542
            VPKPGKKRKFM+VSKH+ +D+SS+N + +DSVKF +YLMPQG+GSRGWK+++K ++ EK+
Sbjct: 1856 VPKPGKKRKFMEVSKHYVADRSSQNNEANDSVKFTKYLMPQGAGSRGWKSTSKTELNEKR 1915

Query: 543  APEDRPKVIRSGKPPSVSQGAVPQKDNLTSAKSAPRDVS-MTDQI--PEDSIGNEENNAG 713
                +PKV++SGKP ++S   +PQ++NLTS   +  D S +TD +   +DS+ + EN   
Sbjct: 1916 PAISKPKVLKSGKPQNISGRTIPQRENLTSTSVSITDGSALTDHVAKTKDSVSHSENATE 1975

Query: 714  QQNLLEFGSFSNSQDTSEGSTLVSSLGLP 800
            +QNL+ F SFS S  T EG  L S+L LP
Sbjct: 1976 KQNLMGFQSFSTSGAT-EGPILFSALALP 2003


>ref|XP_002304281.1| predicted protein [Populus trichocarpa] gi|222841713|gb|EEE79260.1|
            predicted protein [Populus trichocarpa]
          Length = 2105

 Score =  265 bits (678), Expect = 7e-69
 Identities = 138/265 (52%), Positives = 186/265 (70%), Gaps = 5/265 (1%)
 Frame = +3

Query: 9    GDTSVVRAWHLRPTLTWQDGEWIEWSGARQRFPSQ--GDAPQEKRAKLGSPAIEAKGKDK 182
            G+TSVV+AWHLRP+L W+D EW+EWSG+R    S   GD PQEKR ++  P ++AKGKDK
Sbjct: 1743 GETSVVKAWHLRPSLLWEDEEWVEWSGSRAGTHSTNGGDTPQEKRPRVRGPVVDAKGKDK 1802

Query: 183  IPSGVDLVQSRKHEESRLLPLSASEIEFNVGMNTRHDNKLDAQRTMRTGLQKEGSRVVFG 362
            +P G+D V++ K +E  LL L+A E  FN+G + +  N+ DA R  RTGLQKEGSRV+FG
Sbjct: 1803 LPKGLDSVETDKPDEPTLLDLAAHEKLFNIGKSMKDGNRPDALRMARTGLQKEGSRVIFG 1862

Query: 363  VPKPGKKRKFMDVSKHFDSDQSSKNLKTSDSVKFARYLMPQGSGSRGWKNSTKIDVKEKQ 542
            VPKPGKKRKFM+VSKH+ +D+SSKN + +D  KFA+YL+PQGSGSRGWKN+ K +  EK+
Sbjct: 1863 VPKPGKKRKFMEVSKHYVADRSSKNNEVNDPDKFAKYLLPQGSGSRGWKNTLKTESLEKR 1922

Query: 543  APEDRPKVIRSGKPPSVSQGAVPQKDN-LTSAKSAPRDVSMTDQIPED--SIGNEENNAG 713
                +PKV++ GKP +VS   + QKDN LT+A SA  D + TD + ++  S  + EN + 
Sbjct: 1923 TAASKPKVLKLGKPQNVSGRTIAQKDNSLTTAVSA-SDGAATDHVAKNKASTSHVENTSE 1981

Query: 714  QQNLLEFGSFSNSQDTSEGSTLVSS 788
            +  L +F   S+S   +EG    SS
Sbjct: 1982 KHALTDFQPLSSSVGGAEGQIFSSS 2006


Top