BLASTX nr result

ID: Panax21_contig00001744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001744
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O65743.1|RL24_CICAR RecName: Full=60S ribosomal protein L24 g...   166   2e-39
gb|AFK43072.1| unknown [Lotus japonicus]                              165   4e-39
ref|XP_002283947.2| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma...   164   5e-39
emb|CBI30217.3| unnamed protein product [Vitis vinifera]              164   5e-39
ref|XP_002528634.1| 60S ribosomal protein L24, putative [Ricinus...   163   1e-38

>sp|O65743.1|RL24_CICAR RecName: Full=60S ribosomal protein L24 gi|2961300|emb|CAA12358.1|
           ribosomal protein L24 [Cicer arietinum]
          Length = 164

 Score =  166 bits (419), Expect = 2e-39
 Identities = 86/116 (74%), Positives = 88/116 (75%)
 Frame = +1

Query: 1   NSKCKRYFHNRLKPSKLTWTAMYRKQHKKDAAQEAVKKRRRTTKKPYSRSIVGATLEVIQ 180
           NSKCKRYFHNRLKPSKLTWTAM+RKQHKKDAAQEAVKKRRR TKKPYSRSIVGATLEVIQ
Sbjct: 35  NSKCKRYFHNRLKPSKLTWTAMFRKQHKKDAAQEAVKKRRRATKKPYSRSIVGATLEVIQ 94

Query: 181 KKRTEKPEVRDAAREAALXXXXXXXXXXXXXXXXXXXXXXXXXQKSSGRGNVPKGA 348
           KKRTEKPEVRDAAREAAL                         QKS G+GNV KGA
Sbjct: 95  KKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVASKAQKSQGKGNVQKGA 150


>gb|AFK43072.1| unknown [Lotus japonicus]
          Length = 164

 Score =  165 bits (417), Expect = 4e-39
 Identities = 86/117 (73%), Positives = 87/117 (74%)
 Frame = +1

Query: 1   NSKCKRYFHNRLKPSKLTWTAMYRKQHKKDAAQEAVKKRRRTTKKPYSRSIVGATLEVIQ 180
           NSKCK YFHNRLKPSKLTWTAMYRKQHKKD AQEAVKKRRR TKKPYSRSIVGATLEVIQ
Sbjct: 35  NSKCKHYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQ 94

Query: 181 KKRTEKPEVRDAAREAALXXXXXXXXXXXXXXXXXXXXXXXXXQKSSGRGNVPKGAA 351
           KKRTEKPEVRDAAREAAL                         QKS G+GNV KGAA
Sbjct: 95  KKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAETTAKSQKSQGKGNVSKGAA 151


>ref|XP_002283947.2| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L24 [Vitis
           vinifera]
          Length = 198

 Score =  164 bits (416), Expect = 5e-39
 Identities = 85/117 (72%), Positives = 88/117 (75%)
 Frame = +1

Query: 1   NSKCKRYFHNRLKPSKLTWTAMYRKQHKKDAAQEAVKKRRRTTKKPYSRSIVGATLEVIQ 180
           NSKCKRYFHNRLKPSKLTWTAMYRKQHKKD AQEAVKKRRR TKKPYSRSIVGATLEVIQ
Sbjct: 68  NSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQ 127

Query: 181 KKRTEKPEVRDAAREAALXXXXXXXXXXXXXXXXXXXXXXXXXQKSSGRGNVPKGAA 351
           K+RTEK EVRDAAREAAL                         QK+ G+GNVPKGAA
Sbjct: 128 KRRTEKAEVRDAAREAALREIKERIKKTKDEKKAKKAEVMAKVQKTQGKGNVPKGAA 184


>emb|CBI30217.3| unnamed protein product [Vitis vinifera]
          Length = 165

 Score =  164 bits (416), Expect = 5e-39
 Identities = 85/117 (72%), Positives = 88/117 (75%)
 Frame = +1

Query: 1   NSKCKRYFHNRLKPSKLTWTAMYRKQHKKDAAQEAVKKRRRTTKKPYSRSIVGATLEVIQ 180
           NSKCKRYFHNRLKPSKLTWTAMYRKQHKKD AQEAVKKRRR TKKPYSRSIVGATLEVIQ
Sbjct: 35  NSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQ 94

Query: 181 KKRTEKPEVRDAAREAALXXXXXXXXXXXXXXXXXXXXXXXXXQKSSGRGNVPKGAA 351
           K+RTEK EVRDAAREAAL                         QK+ G+GNVPKGAA
Sbjct: 95  KRRTEKAEVRDAAREAALREIKERIKKTKDEKKAKKAEVMAKVQKTQGKGNVPKGAA 151


>ref|XP_002528634.1| 60S ribosomal protein L24, putative [Ricinus communis]
           gi|223531923|gb|EEF33737.1| 60S ribosomal protein L24,
           putative [Ricinus communis]
          Length = 186

 Score =  163 bits (413), Expect = 1e-38
 Identities = 84/117 (71%), Positives = 87/117 (74%)
 Frame = +1

Query: 1   NSKCKRYFHNRLKPSKLTWTAMYRKQHKKDAAQEAVKKRRRTTKKPYSRSIVGATLEVIQ 180
           NSKCKRYFHNRLKPSKLTWTAMYRKQHKKD AQEAVKKRRRTTKKPYSRSIVGATLEVIQ
Sbjct: 57  NSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQ 116

Query: 181 KKRTEKPEVRDAAREAALXXXXXXXXXXXXXXXXXXXXXXXXXQKSSGRGNVPKGAA 351
           K+RTEKPEVRDAAREAAL                         QK+ G+ NVPK  A
Sbjct: 117 KRRTEKPEVRDAAREAALREIKERIKKTKDAKKAKKAEVMAKTQKAGGKANVPKSGA 173


Top