BLASTX nr result

ID: Panax21_contig00001739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001739
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591273.1| Bifunctional aminoacyl-tRNA synthetase [Medi...    97   2e-18
ref|XP_002512595.1| glutamyl-tRNA synthetase, cytoplasmic, putat...    94   1e-17
ref|XP_003555767.1| PREDICTED: probable glutamyl-tRNA synthetase...    93   2e-17
ref|XP_004169897.1| PREDICTED: LOW QUALITY PROTEIN: probable glu...    92   3e-17
ref|XP_004135579.1| PREDICTED: probable glutamate--tRNA ligase, ...    92   3e-17

>ref|XP_003591273.1| Bifunctional aminoacyl-tRNA synthetase [Medicago truncatula]
           gi|355480321|gb|AES61524.1| Bifunctional aminoacyl-tRNA
           synthetase [Medicago truncatula]
          Length = 735

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 52/99 (52%), Positives = 58/99 (58%)
 Frame = +2

Query: 5   EDFLDVINPCTKKEITAFGDSNMRNLKQGEILQLERKGYFRCDVPFVXXXXXXXXXXXXX 184
           EDF DV+NPCTKKE  A+GDSNMRNLK+GE+LQLERKGYFRCDVPFV             
Sbjct: 668 EDFTDVLNPCTKKETLAYGDSNMRNLKRGEVLQLERKGYFRCDVPFV------------- 714

Query: 185 XXXXXXXXXXXXXXXXXXXXXXXXVLFSIPDGRQQTASK 301
                                   VLF+IPDGRQQT+ K
Sbjct: 715 ------------------RPSKPIVLFAIPDGRQQTSLK 735


>ref|XP_002512595.1| glutamyl-tRNA synthetase, cytoplasmic, putative [Ricinus communis]
           gi|223548556|gb|EEF50047.1| glutamyl-tRNA synthetase,
           cytoplasmic, putative [Ricinus communis]
          Length = 728

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 51/99 (51%), Positives = 57/99 (57%)
 Frame = +2

Query: 5   EDFLDVINPCTKKEITAFGDSNMRNLKQGEILQLERKGYFRCDVPFVXXXXXXXXXXXXX 184
           E+FLDV+NPCTKKE  A GDSNMRNLK+GEILQLERKGYFRCDVPF+             
Sbjct: 661 ENFLDVLNPCTKKETAALGDSNMRNLKRGEILQLERKGYFRCDVPFI------------- 707

Query: 185 XXXXXXXXXXXXXXXXXXXXXXXXVLFSIPDGRQQTASK 301
                                   VL +IPDGRQ T+SK
Sbjct: 708 ------------------RPSKPIVLLAIPDGRQPTSSK 728


>ref|XP_003555767.1| PREDICTED: probable glutamyl-tRNA synthetase, cytoplasmic-like
           [Glycine max]
          Length = 732

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 47/100 (47%), Positives = 60/100 (60%)
 Frame = +2

Query: 2   DEDFLDVINPCTKKEITAFGDSNMRNLKQGEILQLERKGYFRCDVPFVXXXXXXXXXXXX 181
           +EDF+DV+NPCTKKE  A+GDSNMRNL++G++LQLERKGYFRCD+PF+            
Sbjct: 664 EEDFIDVLNPCTKKETLAYGDSNMRNLQRGDVLQLERKGYFRCDLPFI------------ 711

Query: 182 XXXXXXXXXXXXXXXXXXXXXXXXXVLFSIPDGRQQTASK 301
                                    VL++IPDGRQQT+ K
Sbjct: 712 -------------------RPSQPIVLYAIPDGRQQTSLK 732


>ref|XP_004169897.1| PREDICTED: LOW QUALITY PROTEIN: probable glutamate--tRNA ligase,
           cytoplasmic-like, partial [Cucumis sativus]
          Length = 682

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 50/99 (50%), Positives = 57/99 (57%)
 Frame = +2

Query: 5   EDFLDVINPCTKKEITAFGDSNMRNLKQGEILQLERKGYFRCDVPFVXXXXXXXXXXXXX 184
           EDFLDV+NPCTKKE  A GDSNMRN+K+G+ILQLERKGYFRCDVP+V             
Sbjct: 615 EDFLDVLNPCTKKETIAVGDSNMRNIKRGDILQLERKGYFRCDVPYV------------- 661

Query: 185 XXXXXXXXXXXXXXXXXXXXXXXXVLFSIPDGRQQTASK 301
                                   VLF+IPDGRQQ+  K
Sbjct: 662 ------------------RSSKPIVLFAIPDGRQQSCLK 682


>ref|XP_004135579.1| PREDICTED: probable glutamate--tRNA ligase, cytoplasmic-like
           [Cucumis sativus]
          Length = 729

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 50/99 (50%), Positives = 57/99 (57%)
 Frame = +2

Query: 5   EDFLDVINPCTKKEITAFGDSNMRNLKQGEILQLERKGYFRCDVPFVXXXXXXXXXXXXX 184
           EDFLDV+NPCTKKE  A GDSNMRN+K+G+ILQLERKGYFRCDVP+V             
Sbjct: 662 EDFLDVLNPCTKKETIAVGDSNMRNIKRGDILQLERKGYFRCDVPYV------------- 708

Query: 185 XXXXXXXXXXXXXXXXXXXXXXXXVLFSIPDGRQQTASK 301
                                   VLF+IPDGRQQ+  K
Sbjct: 709 ------------------RSSKPIVLFAIPDGRQQSCLK 729


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