BLASTX nr result
ID: Panax21_contig00001737
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00001737 (1643 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAR15470.1| nuclear division RFT1-like protein [Capsella rube... 64 1e-07 gb|AAR15439.1| nuclear division RFT1-like protein [Sisymbrium irio] 64 1e-07 ref|XP_002510976.1| Oligosaccharide translocation protein rft1, ... 64 2e-07 ref|XP_002882658.1| hypothetical protein ARALYDRAFT_317829 [Arab... 63 2e-07 ref|XP_002326611.1| predicted protein [Populus trichocarpa] gi|2... 63 2e-07 >gb|AAR15470.1| nuclear division RFT1-like protein [Capsella rubella] Length = 478 Score = 63.9 bits (154), Expect = 1e-07 Identities = 28/33 (84%), Positives = 32/33 (96%) Frame = -1 Query: 662 MQLYAVQFHLFVTCVLFLNREGFRRACMRAEFS 564 MQLYAVQFHLFVTCVLFL+REGFRRAC+RA+ + Sbjct: 1 MQLYAVQFHLFVTCVLFLSREGFRRACLRADIN 33 >gb|AAR15439.1| nuclear division RFT1-like protein [Sisymbrium irio] Length = 481 Score = 63.9 bits (154), Expect = 1e-07 Identities = 28/33 (84%), Positives = 32/33 (96%) Frame = -1 Query: 662 MQLYAVQFHLFVTCVLFLNREGFRRACMRAEFS 564 MQLYAVQFHLFVTCVLFL+REGFRRAC+RA+ + Sbjct: 1 MQLYAVQFHLFVTCVLFLSREGFRRACLRADIN 33 >ref|XP_002510976.1| Oligosaccharide translocation protein rft1, putative [Ricinus communis] gi|223550091|gb|EEF51578.1| Oligosaccharide translocation protein rft1, putative [Ricinus communis] Length = 436 Score = 63.5 bits (153), Expect = 2e-07 Identities = 32/42 (76%), Positives = 35/42 (83%), Gaps = 3/42 (7%) Frame = -1 Query: 686 SYISFHYTMQ---LYAVQFHLFVTCVLFLNREGFRRACMRAE 570 S+I H T Q +YAVQFHLFVTCVLFL+REGFRRACMRAE Sbjct: 41 SWIIRHLTEQDYAIYAVQFHLFVTCVLFLSREGFRRACMRAE 82 >ref|XP_002882658.1| hypothetical protein ARALYDRAFT_317829 [Arabidopsis lyrata subsp. lyrata] gi|297328498|gb|EFH58917.1| hypothetical protein ARALYDRAFT_317829 [Arabidopsis lyrata subsp. lyrata] Length = 468 Score = 63.2 bits (152), Expect = 2e-07 Identities = 31/44 (70%), Positives = 35/44 (79%) Frame = -1 Query: 662 MQLYAVQFHLFVTCVLFLNREGFRRACMRAEFSWSQVLDL*LKV 531 M+LYAVQFHLFVTCVLFL+REGFRRAC+RA S + LKV Sbjct: 1 MKLYAVQFHLFVTCVLFLSREGFRRACLRANIKSSSDVTRLLKV 44 >ref|XP_002326611.1| predicted protein [Populus trichocarpa] gi|222833933|gb|EEE72410.1| predicted protein [Populus trichocarpa] Length = 476 Score = 63.2 bits (152), Expect = 2e-07 Identities = 28/31 (90%), Positives = 31/31 (100%) Frame = -1 Query: 662 MQLYAVQFHLFVTCVLFLNREGFRRACMRAE 570 +QLYAVQFHLFVTCVLFL+REGFRRACMRA+ Sbjct: 1 VQLYAVQFHLFVTCVLFLSREGFRRACMRAD 31