BLASTX nr result

ID: Panax21_contig00001737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001737
         (1643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR15470.1| nuclear division RFT1-like protein [Capsella rube...    64   1e-07
gb|AAR15439.1| nuclear division RFT1-like protein [Sisymbrium irio]    64   1e-07
ref|XP_002510976.1| Oligosaccharide translocation protein rft1, ...    64   2e-07
ref|XP_002882658.1| hypothetical protein ARALYDRAFT_317829 [Arab...    63   2e-07
ref|XP_002326611.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-07

>gb|AAR15470.1| nuclear division RFT1-like protein [Capsella rubella]
          Length = 478

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 28/33 (84%), Positives = 32/33 (96%)
 Frame = -1

Query: 662 MQLYAVQFHLFVTCVLFLNREGFRRACMRAEFS 564
           MQLYAVQFHLFVTCVLFL+REGFRRAC+RA+ +
Sbjct: 1   MQLYAVQFHLFVTCVLFLSREGFRRACLRADIN 33


>gb|AAR15439.1| nuclear division RFT1-like protein [Sisymbrium irio]
          Length = 481

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 28/33 (84%), Positives = 32/33 (96%)
 Frame = -1

Query: 662 MQLYAVQFHLFVTCVLFLNREGFRRACMRAEFS 564
           MQLYAVQFHLFVTCVLFL+REGFRRAC+RA+ +
Sbjct: 1   MQLYAVQFHLFVTCVLFLSREGFRRACLRADIN 33


>ref|XP_002510976.1| Oligosaccharide translocation protein rft1, putative [Ricinus
           communis] gi|223550091|gb|EEF51578.1| Oligosaccharide
           translocation protein rft1, putative [Ricinus communis]
          Length = 436

 Score = 63.5 bits (153), Expect = 2e-07
 Identities = 32/42 (76%), Positives = 35/42 (83%), Gaps = 3/42 (7%)
 Frame = -1

Query: 686 SYISFHYTMQ---LYAVQFHLFVTCVLFLNREGFRRACMRAE 570
           S+I  H T Q   +YAVQFHLFVTCVLFL+REGFRRACMRAE
Sbjct: 41  SWIIRHLTEQDYAIYAVQFHLFVTCVLFLSREGFRRACMRAE 82


>ref|XP_002882658.1| hypothetical protein ARALYDRAFT_317829 [Arabidopsis lyrata subsp.
           lyrata] gi|297328498|gb|EFH58917.1| hypothetical protein
           ARALYDRAFT_317829 [Arabidopsis lyrata subsp. lyrata]
          Length = 468

 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 31/44 (70%), Positives = 35/44 (79%)
 Frame = -1

Query: 662 MQLYAVQFHLFVTCVLFLNREGFRRACMRAEFSWSQVLDL*LKV 531
           M+LYAVQFHLFVTCVLFL+REGFRRAC+RA    S  +   LKV
Sbjct: 1   MKLYAVQFHLFVTCVLFLSREGFRRACLRANIKSSSDVTRLLKV 44


>ref|XP_002326611.1| predicted protein [Populus trichocarpa] gi|222833933|gb|EEE72410.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 28/31 (90%), Positives = 31/31 (100%)
 Frame = -1

Query: 662 MQLYAVQFHLFVTCVLFLNREGFRRACMRAE 570
           +QLYAVQFHLFVTCVLFL+REGFRRACMRA+
Sbjct: 1   VQLYAVQFHLFVTCVLFLSREGFRRACMRAD 31


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