BLASTX nr result
ID: Panax21_contig00001734
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00001734
(2158 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004147097.1| PREDICTED: lipoyl synthase, chloroplastic-li... 98 3e-30
ref|XP_002518326.1| lipoic acid synthetase, putative [Ricinus co... 100 3e-30
ref|XP_002319912.1| predicted protein [Populus trichocarpa] gi|3... 98 4e-29
ref|XP_003555873.1| PREDICTED: lipoyl synthase, chloroplastic-li... 98 6e-29
ref|XP_003535745.1| PREDICTED: LOW QUALITY PROTEIN: lipoyl synth... 96 1e-28
>ref|XP_004147097.1| PREDICTED: lipoyl synthase, chloroplastic-like [Cucumis sativus]
gi|449526690|ref|XP_004170346.1| PREDICTED: lipoyl
synthase, chloroplastic-like [Cucumis sativus]
Length = 398
Score = 98.2 bits (243), Expect(3) = 3e-30
Identities = 47/54 (87%), Positives = 51/54 (94%)
Frame = +3
Query: 1368 QKLKPDIMVECLTSDFRGDLNAVSTLVHSGLDVFAHNIETVKRL*RIVRDPRAG 1529
++LKP+IMVECLTSDFRGDL AV TLVHSGLDVFAHN+ETVKRL RIVRDPRAG
Sbjct: 225 KELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNVETVKRLQRIVRDPRAG 278
Score = 49.7 bits (117), Expect(3) = 3e-30
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +2
Query: 1172 TNVDRDDIPDGGSGHFAETVKAMNVL 1249
T+VDRDDIPDGGSGHFA+TVKAM L
Sbjct: 202 TSVDRDDIPDGGSGHFAQTVKAMKEL 227
Score = 33.1 bits (74), Expect(3) = 3e-30
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 1132 SRNPAPPDPMEPQN 1173
SRNPAPPDPMEP N
Sbjct: 173 SRNPAPPDPMEPLN 186
>ref|XP_002518326.1| lipoic acid synthetase, putative [Ricinus communis]
gi|308197093|sp|B9RX57.1|LISC_RICCO RecName: Full=Lipoyl
synthase, chloroplastic; AltName: Full=Lipoate synthase;
Short=LS; Short=Lip-syn; AltName: Full=Lipoate synthase,
plastidial; Short=LIP1p; AltName: Full=Lipoic acid
synthase; Flags: Precursor gi|223542546|gb|EEF44086.1|
lipoic acid synthetase, putative [Ricinus communis]
Length = 364
Score = 100 bits (248), Expect(3) = 3e-30
Identities = 49/54 (90%), Positives = 51/54 (94%)
Frame = +3
Query: 1368 QKLKPDIMVECLTSDFRGDLNAVSTLVHSGLDVFAHNIETVKRL*RIVRDPRAG 1529
+KLKP+IMVECLTSDFRGDL AV TLVHSGLDVFAHNIETVKRL RIVRDPRAG
Sbjct: 190 KKLKPEIMVECLTSDFRGDLEAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG 243
Score = 47.4 bits (111), Expect(3) = 3e-30
Identities = 20/26 (76%), Positives = 24/26 (92%)
Frame = +2
Query: 1172 TNVDRDDIPDGGSGHFAETVKAMNVL 1249
T+VDRDD+PDGGSGHF+ETV+AM L
Sbjct: 167 TSVDRDDLPDGGSGHFSETVQAMKKL 192
Score = 33.5 bits (75), Expect(3) = 3e-30
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +1
Query: 1132 SRNPAPPDPMEPQN 1173
SRNP+PPDP+EPQN
Sbjct: 138 SRNPSPPDPLEPQN 151
>ref|XP_002319912.1| predicted protein [Populus trichocarpa]
gi|308191445|sp|B9I666.1|LISC1_POPTR RecName: Full=Lipoyl
synthase 1, chloroplastic; AltName: Full=Lipoate synthase
1; Short=LS 1; Short=Lip-syn 1; AltName: Full=Lipoate
synthase, plastidial 1; Short=LIP1p 1; AltName:
Full=Lipoic acid synthase 1; Flags: Precursor
gi|222858288|gb|EEE95835.1| predicted protein [Populus
trichocarpa]
Length = 376
Score = 98.2 bits (243), Expect(3) = 4e-29
Identities = 47/54 (87%), Positives = 51/54 (94%)
Frame = +3
Query: 1368 QKLKPDIMVECLTSDFRGDLNAVSTLVHSGLDVFAHNIETVKRL*RIVRDPRAG 1529
++LKP+IMVECLTSDFRGDL AV TLVHSGLDVFAHN+ETVKRL RIVRDPRAG
Sbjct: 202 KELKPEIMVECLTSDFRGDLKAVDTLVHSGLDVFAHNVETVKRLQRIVRDPRAG 255
Score = 47.8 bits (112), Expect(3) = 4e-29
Identities = 20/26 (76%), Positives = 24/26 (92%)
Frame = +2
Query: 1172 TNVDRDDIPDGGSGHFAETVKAMNVL 1249
T+VDRDD+PDGGSGHFA+TV+AM L
Sbjct: 179 TSVDRDDLPDGGSGHFAQTVRAMKEL 204
Score = 31.2 bits (69), Expect(3) = 4e-29
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1
Query: 1132 SRNPAPPDPMEPQN 1173
SRNP PPDPMEP N
Sbjct: 150 SRNPPPPDPMEPLN 163
>ref|XP_003555873.1| PREDICTED: lipoyl synthase, chloroplastic-like [Glycine max]
Length = 364
Score = 98.2 bits (243), Expect(3) = 6e-29
Identities = 48/54 (88%), Positives = 50/54 (92%)
Frame = +3
Query: 1368 QKLKPDIMVECLTSDFRGDLNAVSTLVHSGLDVFAHNIETVKRL*RIVRDPRAG 1529
+ LKP+IMVECLTSDFRGDL AV TLVHSGLDVFAHNIETVKRL RIVRDPRAG
Sbjct: 189 KNLKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG 242
Score = 48.5 bits (114), Expect(3) = 6e-29
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = +2
Query: 1172 TNVDRDDIPDGGSGHFAETVKAMNVL 1249
T+VDRDD+PDGGSGHFA+TVKAM L
Sbjct: 166 TSVDRDDLPDGGSGHFAQTVKAMKNL 191
Score = 29.6 bits (65), Expect(3) = 6e-29
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 1132 SRNPAPPDPMEPQN 1173
SRNP P DPMEP+N
Sbjct: 137 SRNPPPADPMEPEN 150
>ref|XP_003535745.1| PREDICTED: LOW QUALITY PROTEIN: lipoyl synthase, chloroplastic-like
[Glycine max]
Length = 358
Score = 95.9 bits (237), Expect(3) = 1e-28
Identities = 47/54 (87%), Positives = 49/54 (90%)
Frame = +3
Query: 1368 QKLKPDIMVECLTSDFRGDLNAVSTLVHSGLDVFAHNIETVKRL*RIVRDPRAG 1529
+ LKP+IMVECLTSDFRGDL AV LVHSGLDVFAHNIETVKRL RIVRDPRAG
Sbjct: 183 KNLKPEIMVECLTSDFRGDLKAVEILVHSGLDVFAHNIETVKRLQRIVRDPRAG 236
Score = 48.5 bits (114), Expect(3) = 1e-28
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = +2
Query: 1172 TNVDRDDIPDGGSGHFAETVKAMNVL 1249
T+VDRDD+PDGGSGHFA+TVKAM L
Sbjct: 160 TSVDRDDLPDGGSGHFAQTVKAMKNL 185
Score = 30.8 bits (68), Expect(3) = 1e-28
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1
Query: 1132 SRNPAPPDPMEPQN 1173
SRNP PPDPMEP N
Sbjct: 130 SRNPPPPDPMEPIN 143