BLASTX nr result

ID: Panax21_contig00001729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00001729
         (1133 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279606.2| PREDICTED: ATP-dependent DNA helicase Q-like...   449   e-124
emb|CBI39502.3| unnamed protein product [Vitis vinifera]              442   e-122
ref|XP_002512419.1| DNA helicase, putative [Ricinus communis] gi...   417   e-114
ref|XP_002330211.1| predicted protein [Populus trichocarpa] gi|2...   413   e-113
ref|XP_003555610.1| PREDICTED: ATP-dependent DNA helicase Q-like...   405   e-110

>ref|XP_002279606.2| PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Vitis
            vinifera]
          Length = 893

 Score =  449 bits (1155), Expect = e-124
 Identities = 211/322 (65%), Positives = 260/322 (80%)
 Frame = -1

Query: 1133 QVHKEFHENVLEVVVATIAFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADC 954
            +VHKEFH+N L+VVVATIAFGMGIDK NVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADC
Sbjct: 572  RVHKEFHDNALQVVVATIAFGMGIDKLNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADC 631

Query: 953  VLYANLSKIPTLLPSQRSEEQTKQAYRMLSDCFRYGMYTSCCRAKTLVQYFGEEFSCEKC 774
            +LYANLS++PTLLPSQRSE+QTKQAY+MLSDCFRYGM T+CCRAKTLV+YFGE+F  + C
Sbjct: 632  ILYANLSRVPTLLPSQRSEDQTKQAYKMLSDCFRYGMNTTCCRAKTLVEYFGEDFCHQSC 691

Query: 773  LLCDVCVNGPPEMQNLKAEAEIFMQAIAAQNAQRSFEDEPYGDALYSCNKLRRCMEKPSL 594
            +LCDVCVNGPPE QNLK EA+ FM  IAA   + SF D+ Y   +Y   + +R M+KP+L
Sbjct: 692  ILCDVCVNGPPEKQNLKDEADTFMHVIAAHYGKSSFVDDLYDGVIYGDVEQQRFMDKPNL 751

Query: 593  KIIVSRIREKFQTYAASDLLWWQGLARILEERGYIREGADMLHVQIKFPEPTQLGMEFLR 414
            +++VSRIRE+FQ +AA+DLLWW+GLARI+E++GYIREG D +HVQIKFP+PT+LG+EFL+
Sbjct: 752  RMLVSRIREQFQKFAATDLLWWRGLARIMEDKGYIREGEDRIHVQIKFPKPTKLGLEFLQ 811

Query: 413  SKLEEPFHVYPEADMILSMKTDRSYSTFAEWGKGWADPEIXXXXXXXXXXXXXXXXXXXX 234
            S  E+ F VYP+ADM+LS +  +SYSTF+EWGKGWADPEI                    
Sbjct: 812  STTEQTFDVYPQADMLLSTRNPKSYSTFSEWGKGWADPEIRRQRLERRRSQRKPRKRKSR 871

Query: 233  XXKADLSTVRGRLASKLSTKQK 168
              + ++ T RGRLA+KL  +++
Sbjct: 872  KHQPNMKTARGRLAAKLLIQKR 893


>emb|CBI39502.3| unnamed protein product [Vitis vinifera]
          Length = 1537

 Score =  442 bits (1136), Expect = e-122
 Identities = 203/280 (72%), Positives = 245/280 (87%)
 Frame = -1

Query: 1133 QVHKEFHENVLEVVVATIAFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADC 954
            +VHKEFH+N L+VVVATIAFGMGIDK NVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADC
Sbjct: 531  RVHKEFHDNALQVVVATIAFGMGIDKLNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADC 590

Query: 953  VLYANLSKIPTLLPSQRSEEQTKQAYRMLSDCFRYGMYTSCCRAKTLVQYFGEEFSCEKC 774
            +LYANLS++PTLLPSQRSE+QTKQAY+MLSDCFRYGM T+CCRAKTLV+YFGE+F  + C
Sbjct: 591  ILYANLSRVPTLLPSQRSEDQTKQAYKMLSDCFRYGMNTTCCRAKTLVEYFGEDFCHQSC 650

Query: 773  LLCDVCVNGPPEMQNLKAEAEIFMQAIAAQNAQRSFEDEPYGDALYSCNKLRRCMEKPSL 594
            +LCDVCVNGPPE QNLK EA+ FM  IAA   + SF D+ Y   +Y   + +R M+KP+L
Sbjct: 651  ILCDVCVNGPPEKQNLKDEADTFMHVIAAHYGKSSFVDDLYDGVIYGDVEQQRFMDKPNL 710

Query: 593  KIIVSRIREKFQTYAASDLLWWQGLARILEERGYIREGADMLHVQIKFPEPTQLGMEFLR 414
            +++VSRIRE+FQ +AA+DLLWW+GLARI+E++GYIREG D +HVQIKFP+PT+LG+EFL+
Sbjct: 711  RMLVSRIREQFQKFAATDLLWWRGLARIMEDKGYIREGEDRIHVQIKFPKPTKLGLEFLQ 770

Query: 413  SKLEEPFHVYPEADMILSMKTDRSYSTFAEWGKGWADPEI 294
            S  E+ F VYP+ADM+LS +  +SYSTF+EWGKGWADPEI
Sbjct: 771  STTEQTFDVYPQADMLLSTRNPKSYSTFSEWGKGWADPEI 810


>ref|XP_002512419.1| DNA helicase, putative [Ricinus communis] gi|223548380|gb|EEF49871.1|
            DNA helicase, putative [Ricinus communis]
          Length = 803

 Score =  417 bits (1072), Expect = e-114
 Identities = 208/328 (63%), Positives = 249/328 (75%), Gaps = 6/328 (1%)
 Frame = -1

Query: 1133 QVHKEFHENVLEVVVATIAFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADC 954
            +VHKEFHEN+LEVVVATIAFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGK A+C
Sbjct: 478  RVHKEFHENMLEVVVATIAFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKPAEC 537

Query: 953  VLYANLSKIPTLLPSQRSEEQTKQAYRMLSDCFRYGMYTSCCRAKTLVQYFGEEFSCEKC 774
            +LYANLS+ P+LLPS+RSE Q KQAY+MLSDCFRYGM TS CRAKTLVQYFGE+F+ EKC
Sbjct: 538  ILYANLSRAPSLLPSKRSEVQAKQAYKMLSDCFRYGMNTSNCRAKTLVQYFGEDFTSEKC 597

Query: 773  LLCDVCVNGPPEMQNLKAEAEIFMQAIAAQNAQRSFEDEPYGDALYSCNKLRRCMEKPSL 594
            LLCDVCV GPP+M N K EA+I MQ IAA + Q S  D  Y D  +   K  R +++P+L
Sbjct: 598  LLCDVCVRGPPKMHNWKEEADILMQIIAAHHGQSSSLDGAYDDT-FGDLKSHRSVQRPNL 656

Query: 593  KIIVSRIREKFQTYAASDLLWWQGLARILEERGYIREGADMLHVQIKFPEPTQLGMEFLR 414
            ++ VS++RE+ Q +   D LWW+GL RI+E +GYIREG D +HVQIKFPEPT+LGMEFL 
Sbjct: 657  RMFVSKLREQSQKFWGKDFLWWRGLVRIMEGKGYIREGDDKIHVQIKFPEPTKLGMEFLE 716

Query: 413  SKLEEPFHVYPEADMILSMKTDRSYSTFAEWGKGWADPEI------XXXXXXXXXXXXXX 252
             + ++PF++YPEADM+L+M   +SYSTFA+WGKGWADPEI                    
Sbjct: 717  YERDQPFYIYPEADMLLAMNQRKSYSTFADWGKGWADPEIRRQRLERKRKERKPRKQRQS 776

Query: 251  XXXXXXXXKADLSTVRGRLASKLSTKQK 168
                    KAD+ T RGR+ +KL  KQK
Sbjct: 777  RSRKSSKPKADMKTARGRITAKL-FKQK 803


>ref|XP_002330211.1| predicted protein [Populus trichocarpa] gi|222871667|gb|EEF08798.1|
            predicted protein [Populus trichocarpa]
          Length = 1048

 Score =  413 bits (1062), Expect = e-113
 Identities = 201/326 (61%), Positives = 251/326 (76%), Gaps = 5/326 (1%)
 Frame = -1

Query: 1133 QVHKEFHENVLEVVVATIAFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADC 954
            QVHKEFHEN+++VVVAT+AFGMGIDKSN+RRIIHYGWPQSLEAYYQEAGRAGRDGKLA+C
Sbjct: 572  QVHKEFHENLIQVVVATVAFGMGIDKSNIRRIIHYGWPQSLEAYYQEAGRAGRDGKLAEC 631

Query: 953  VLYANLSKIPTLLPSQRSEEQTKQAYRMLSDCFRYGMYTSCCRAKTLVQYFGEEFSCEKC 774
            VLYANLS+ P+LLPS+RSE QTK A++MLSDCFRYGM TSCCRAKTLV+YFGE+FS EKC
Sbjct: 632  VLYANLSRTPSLLPSKRSEAQTKHAFKMLSDCFRYGMNTSCCRAKTLVEYFGEDFSYEKC 691

Query: 773  LLCDVCVNGPPEMQNLKAEAEIFMQAIAAQN-AQRSFEDEPYGDALYSCNKLRRCMEKPS 597
            LLCDVCVNGPPEMQ+LK EA+I M+ IAA + ++++   +   D   +  K +R ++KP+
Sbjct: 692  LLCDVCVNGPPEMQDLKEEADILMKVIAAYHLSEQNHSFDSSYDGKCNDTKSQRAVQKPN 751

Query: 596  LKIIVSRIREKFQTYAASDLLWWQGLARILEERGYIREGADMLHVQIKFPEPTQLGMEFL 417
            L++ V++I+E++Q +  +D LWWQGLARI+E +GYIREG +  HVQIK PEPT+LG+++L
Sbjct: 752  LRMFVTKIKEQYQKFWTTDQLWWQGLARIMEGKGYIREGDEKSHVQIKCPEPTKLGLDYL 811

Query: 416  RSKLEEPFHVYPEADMILSMKTDRSYSTFAEWGKGWADPEIXXXXXXXXXXXXXXXXXXX 237
                E+P  VYPEADM LS+   +SYS+FAEWGKGWADPEI                   
Sbjct: 812  EYDREQPLSVYPEADMQLSVNKHKSYSSFAEWGKGWADPEIRRQRLERKQSNRKPRKPRR 871

Query: 236  XXXKA----DLSTVRGRLASKLSTKQ 171
                     D  T RGR+A+KL +KQ
Sbjct: 872  TRKSGKMKLDFKTARGRIAAKLFSKQ 897


>ref|XP_003555610.1| PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Glycine max]
          Length = 854

 Score =  405 bits (1041), Expect = e-110
 Identities = 197/327 (60%), Positives = 246/327 (75%), Gaps = 9/327 (2%)
 Frame = -1

Query: 1133 QVHKEFHENVLEVVVATIAFGMGIDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADC 954
            +VH+EFHEN LEV+VATIAFGMGIDKSNVRRIIHYGWPQSLE YYQEAGRAGRDGKLADC
Sbjct: 525  RVHEEFHENTLEVIVATIAFGMGIDKSNVRRIIHYGWPQSLETYYQEAGRAGRDGKLADC 584

Query: 953  VLYANLSKIPTLLPSQRSEEQTKQAYRMLSDCFRYGMYTSCCRAKTLVQYFGEEFSCEKC 774
            +LYANL+  P+LLPS++SE+Q KQAY MLSDCFRYGM TSCCRAK LV+YFGE+FS +KC
Sbjct: 585  ILYANLANKPSLLPSRKSEDQMKQAYIMLSDCFRYGMNTSCCRAKILVEYFGEDFSHQKC 644

Query: 773  LLCDVCVNGPPEMQNLKAEAEIFMQAIAAQNAQRSFEDEPYGDALYSCNKLRRCMEKPSL 594
            LLCDVC++GPP+ QN+K EA I +Q I A N   ++ D  Y D ++  +K R   E+P+L
Sbjct: 645  LLCDVCIDGPPQRQNVKEEACILLQTIGAHNECNNYLDCSYDDDIHFHSKHRGLRERPNL 704

Query: 593  KIIVSRIREKFQTYAASDLLWWQGLARILEERGYIREGADMLHVQIKFPEPTQLGMEFLR 414
            +I+V +IR++FQ +  +D+LWW+GLARILE +GYI EG D  HVQ K+ EPT+LG+EF++
Sbjct: 705  QILVGKIRQQFQKFLTTDILWWRGLARILEVKGYIGEGDDKTHVQAKYLEPTELGLEFVK 764

Query: 413  SKLEEPFHVYPEADMILSMKTDRSYSTFAEWGKGWADPEI---------XXXXXXXXXXX 261
            S  E+ F+VYPEADM+L+ KT++ +S+F+EWGKGWADPEI                    
Sbjct: 765  SMSEQDFYVYPEADMLLARKTNKPFSSFSEWGKGWADPEIRRERLERMRVNRKPGMLPSP 824

Query: 260  XXXXXXXXXXXKADLSTVRGRLASKLS 180
                        A L T RGRLA+KLS
Sbjct: 825  KKQRKRKARKGWAGLRTSRGRLAAKLS 851


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